SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    24801 1jfk:A (-1.00) BS03 CA ? GO:0001891 ... P38505 11724551
    24802 1jfk:A (-1.00) BS04 CA ? GO:0001891 ... P38505 11724551
    24803 1jfp:A (-1.00) BS01 RET ? GO:0000139 ... P02699 11570894
    24804 1jfs:A (2.9) BS01 dna ? GO:0000976 ... P0ACP7 11781089
    24805 1jfs:A (2.9) BS02 HPA ? GO:0000976 ... P0ACP7 11781089
    24806 1jft:A (2.5) BS01 dna ? GO:0000976 ... P0ACP7 11781089
    24807 1jft:A (2.5) BS02 HPA ? GO:0000976 ... P0ACP7 11781089
    24808 1jfz:A (2.1) BS01 MN 3.1.26.3 GO:0004525 ... O67082 11738048
    24809 1jfz:B (2.1) BS01 MN 3.1.26.3 GO:0004525 ... O67082 11738048
    24810 1jfz:C (2.1) BS01 MN 3.1.26.3 GO:0004525 ... O67082 11738048
    24811 1jfz:D (2.1) BS01 MN 3.1.26.3 GO:0004525 ... O67082 11738048
    24812 1jg0:A (2.0) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 11590022
    24813 1jg0:A (2.0) BS02 DDT 2.1.1.45 GO:0000287 ... P0A884 11590022 MOAD: ic50=5uM
    BindingDB: IC50=5.0e+3nM, Ki=1.8e+3nM
    24814 1jg0:B (2.0) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 11590022
    24815 1jg0:B (2.0) BS02 DDT 2.1.1.45 GO:0000287 ... P0A884 11590022 MOAD: ic50=5uM
    BindingDB: IC50=5.0e+3nM, Ki=1.8e+3nM
    24816 1jg1:A (1.2) BS01 SAH 2.1.1.77 GO:0004719 ... Q8TZR3 11700066
    24817 1jg2:A (1.5) BS01 ADN 2.1.1.77 GO:0004719 ... Q8TZR3 11700066
    24818 1jg3:A (2.1) BS01 peptide 2.1.1.77 GO:0004719 ... Q8TZR3 11700066
    24819 1jg3:A (2.1) BS02 ADN 2.1.1.77 GO:0004719 ... Q8TZR3 11700066
    24820 1jg3:B (2.1) BS01 peptide 2.1.1.77 GO:0004719 ... Q8TZR3 11700066
    24821 1jg3:B (2.1) BS02 ADN 2.1.1.77 GO:0004719 ... Q8TZR3 11700066
    24822 1jg4:A (1.5) BS01 SAM 2.1.1.77 GO:0004719 ... Q8TZR3 11700066
    24823 1jg6:A (1.9) BS01 UDP 2.4.1.27 GO:0006304 ... P04547 11493010
    24824 1jg7:A (1.65) BS01 UDP 2.4.1.27 GO:0006304 ... P04547 11493010
    24825 1jg8:A (1.8) BS01 CA 4.1.2.5 GO:0005829 ... Q9X266 N/A
    24826 1jg8:B (1.8) BS01 CA 4.1.2.5 GO:0005829 ... Q9X266 N/A
    24827 1jg8:B (1.8) BS02 CA 4.1.2.5 GO:0005829 ... Q9X266 N/A
    24828 1jg8:C (1.8) BS01 CA 4.1.2.5 GO:0005829 ... Q9X266 N/A
    24829 1jg8:D (1.8) BS01 CA 4.1.2.5 GO:0005829 ... Q9X266 N/A
    24830 1jg8:D (1.8) BS02 CA 4.1.2.5 GO:0005829 ... Q9X266 N/A
    24831 1jg9:A (1.66) BS01 GLC 2.4.1.4 GO:0005576 ... Q9ZEU2 11467966
    24832 1jg9:A (1.66) BS02 GLC 2.4.1.4 GO:0005576 ... Q9ZEU2 11467966
    24833 1jgc:A (2.6) BS01 HEM 1.16.3.1 GO:0004322 ... Q59738 11752777
    24834 1jgc:B (2.6) BS01 HEM 1.16.3.1 GO:0004322 ... Q59738 11752777
    24835 1jgc:C (2.6) BS01 HEM 1.16.3.1 GO:0004322 ... Q59738 11752777
    24836 1jgd:A (1.9) BS01 peptide ? N/A P01889 14555655
    24837 1jge:A (2.1) BS01 peptide ? N/A P01889 12244049
    24838 1jgg:A (2.0) BS01 dna ? GO:0000981 ... P06602 8557047
    24839 1jgg:A (2.0) BS02 dna ? GO:0000981 ... P06602 8557047
    24840 1jgg:B (2.0) BS01 dna ? GO:0000981 ... P06602 8557047
    24841 1jgg:B (2.0) BS02 dna ? GO:0000981 ... P06602 8557047
    24842 1jgi:A (2.0) BS01 GLC 2.4.1.4 GO:0005576 ... Q9ZEU2 11467966
    24843 1jgi:A (2.0) BS02 FRU 2.4.1.4 GO:0005576 ... Q9ZEU2 11467966
    24844 1jgj:A (2.4) BS01 RET ? GO:0005216 ... P42196 11452084
    24845 1jgl:H (2.15) BS01 EST N/A N/A N/A 11451948
    24846 1jgl:L (2.15) BS01 EST ? GO:0005576 ... Q7TS98 11451948 MOAD: Kd=2nM
    24847 1jgm:A (1.3) BS01 CD 3.1.8.1 GO:0004063 ... P0A434 11258882
    24848 1jgm:A (1.3) BS02 CD 3.1.8.1 GO:0004063 ... P0A434 11258882
    24849 1jgm:A (1.3) BS03 PEL 3.1.8.1 GO:0004063 ... P0A434 11258882
    24850 1jgm:B (1.3) BS01 CD 3.1.8.1 GO:0004063 ... P0A434 11258882
    24851 1jgm:B (1.3) BS02 CD 3.1.8.1 GO:0004063 ... P0A434 11258882
    24852 1jgm:B (1.3) BS03 PEL 3.1.8.1 GO:0004063 ... P0A434 11258882
    24853 1jgn:A (-1.00) BS01 peptide ? GO:0003723 ... P11940 14685257
    24854 1jgo:J (5.6) BS01 rna ? GO:0000049 ... P17291 11511350
    24855 1jgp:J (7.0) BS01 rna ? GO:0000049 ... P17291 11511350
    24856 1jgq:J (5.0) BS01 rna ? GO:0000049 ... P17291 11511350
    24857 1jgt:A (1.95) BS01 MG 6.3.3.4 GO:0004066 ... P0DJQ7 11473258
    24858 1jgt:A (1.95) BS02 APC 6.3.3.4 GO:0004066 ... P0DJQ7 11473258
    24859 1jgt:A (1.95) BS03 CMA 6.3.3.4 GO:0004066 ... P0DJQ7 11473258
    24860 1jgt:B (1.95) BS01 MG 6.3.3.4 GO:0004066 ... P0DJQ7 11473258
    24861 1jgt:B (1.95) BS02 APC 6.3.3.4 GO:0004066 ... P0DJQ7 11473258
    24862 1jgt:B (1.95) BS03 CMA 6.3.3.4 GO:0004066 ... P0DJQ7 11473258
    24863 1jgu:H (1.8) BS01 HBC ? N/A Q91Z05 11724535
    24864 1jgu:L (1.8) BS01 HBC ? N/A Q52L64 11724535
    24865 1jgw:L (2.8) BS01 BCL ? GO:0009772 ... P0C0Y8 11526320
    24866 1jgw:L (2.8) BS02 BCL ? GO:0009772 ... P0C0Y8 11526320
    24867 1jgw:L (2.8) BS03 BPH ? GO:0009772 ... P0C0Y8 11526320
    24868 1jgw:L (2.8) BS04 FE ? GO:0009772 ... P0C0Y8 11526320
    24869 1jgw:L (2.8) BS05 BCL ? GO:0009772 ... P0C0Y8 11526320
    24870 1jgw:L (2.8) BS06 BPH ? GO:0009772 ... P0C0Y8 11526320
    24871 1jgw:L (2.8) BS07 U10 ? GO:0009772 ... P0C0Y8 11526320
    24872 1jgw:M (2.8) BS01 BCL ? GO:0009772 ... P0C0Y9 11526320
    24873 1jgw:M (2.8) BS02 BPH ? GO:0009772 ... P0C0Y9 11526320
    24874 1jgw:M (2.8) BS03 FE ? GO:0009772 ... P0C0Y9 11526320
    24875 1jgw:M (2.8) BS04 BCL ? GO:0009772 ... P0C0Y9 11526320
    24876 1jgw:M (2.8) BS05 BCL ? GO:0009772 ... P0C0Y9 11526320
    24877 1jgw:M (2.8) BS06 BPH ? GO:0009772 ... P0C0Y9 11526320
    24878 1jgw:M (2.8) BS07 U10 ? GO:0009772 ... P0C0Y9 11526320
    24879 1jgw:M (2.8) BS08 SPO ? GO:0009772 ... P0C0Y9 11526320
    24880 1jgx:L (3.01) BS01 BCL ? GO:0009772 ... P0C0Y8 11526320
    24881 1jgx:L (3.01) BS02 BCL ? GO:0009772 ... P0C0Y8 11526320
    24882 1jgx:L (3.01) BS03 BCL ? GO:0009772 ... P0C0Y8 11526320
    24883 1jgx:L (3.01) BS04 BPH ? GO:0009772 ... P0C0Y8 11526320
    24884 1jgx:L (3.01) BS05 FE ? GO:0009772 ... P0C0Y8 11526320
    24885 1jgx:L (3.01) BS06 BPH ? GO:0009772 ... P0C0Y8 11526320
    24886 1jgx:M (3.01) BS01 BCL ? GO:0009772 ... P0C0Y9 11526320
    24887 1jgx:M (3.01) BS02 BCL ? GO:0009772 ... P0C0Y9 11526320
    24888 1jgx:M (3.01) BS03 BPH ? GO:0009772 ... P0C0Y9 11526320
    24889 1jgx:M (3.01) BS04 FE ? GO:0009772 ... P0C0Y9 11526320
    24890 1jgx:M (3.01) BS05 BCL ? GO:0009772 ... P0C0Y9 11526320
    24891 1jgx:M (3.01) BS06 BPH ? GO:0009772 ... P0C0Y9 11526320
    24892 1jgx:M (3.01) BS07 U10 ? GO:0009772 ... P0C0Y9 11526320
    24893 1jgx:M (3.01) BS08 SPO ? GO:0009772 ... P0C0Y9 11526320
    24894 1jgy:L (2.7) BS01 BCL ? GO:0009772 ... P0C0Y8 11526320
    24895 1jgy:L (2.7) BS02 BCL ? GO:0009772 ... P0C0Y8 11526320
    24896 1jgy:L (2.7) BS03 BPH ? GO:0009772 ... P0C0Y8 11526320
    24897 1jgy:L (2.7) BS04 FE ? GO:0009772 ... P0C0Y8 11526320
    24898 1jgy:L (2.7) BS05 BCL ? GO:0009772 ... P0C0Y8 11526320
    24899 1jgy:L (2.7) BS06 BPH ? GO:0009772 ... P0C0Y8 11526320
    24900 1jgy:L (2.7) BS07 U10 ? GO:0009772 ... P0C0Y8 11526320
    24901 1jgy:M (2.7) BS01 BCL ? GO:0009772 ... P0C0Y9 11526320
    24902 1jgy:M (2.7) BS02 BPH ? GO:0009772 ... P0C0Y9 11526320
    24903 1jgy:M (2.7) BS03 FE ? GO:0009772 ... P0C0Y9 11526320
    24904 1jgy:M (2.7) BS04 BCL ? GO:0009772 ... P0C0Y9 11526320
    24905 1jgy:M (2.7) BS05 BCL ? GO:0009772 ... P0C0Y9 11526320
    24906 1jgy:M (2.7) BS06 BPH ? GO:0009772 ... P0C0Y9 11526320
    24907 1jgy:M (2.7) BS07 U10 ? GO:0009772 ... P0C0Y9 11526320
    24908 1jgy:M (2.7) BS08 SPO ? GO:0009772 ... P0C0Y9 11526320
    24909 1jgz:L (2.7) BS01 BCL ? GO:0009772 ... P0C0Y8 11526320
    24910 1jgz:L (2.7) BS02 BCL ? GO:0009772 ... P0C0Y8 11526320
    24911 1jgz:L (2.7) BS03 BPH ? GO:0009772 ... P0C0Y8 11526320
    24912 1jgz:L (2.7) BS04 FE ? GO:0009772 ... P0C0Y8 11526320
    24913 1jgz:L (2.7) BS05 BCL ? GO:0009772 ... P0C0Y8 11526320
    24914 1jgz:L (2.7) BS06 BPH ? GO:0009772 ... P0C0Y8 11526320
    24915 1jgz:L (2.7) BS07 U10 ? GO:0009772 ... P0C0Y8 11526320
    24916 1jgz:M (2.7) BS01 BCL ? GO:0009772 ... P0C0Y9 11526320
    24917 1jgz:M (2.7) BS02 BPH ? GO:0009772 ... P0C0Y9 11526320
    24918 1jgz:M (2.7) BS03 FE ? GO:0009772 ... P0C0Y9 11526320
    24919 1jgz:M (2.7) BS04 BCL ? GO:0009772 ... P0C0Y9 11526320
    24920 1jgz:M (2.7) BS05 BCL ? GO:0009772 ... P0C0Y9 11526320
    24921 1jgz:M (2.7) BS06 BPH ? GO:0009772 ... P0C0Y9 11526320
    24922 1jgz:M (2.7) BS07 U10 ? GO:0009772 ... P0C0Y9 11526320
    24923 1jgz:M (2.7) BS08 SPO ? GO:0009772 ... P0C0Y9 11526320
    24924 1jh0:L (3.5) BS01 BCL ? GO:0009772 ... P0C0Y8 11526320
    24925 1jh0:L (3.5) BS02 BCL ? GO:0009772 ... P0C0Y8 11526320
    24926 1jh0:L (3.5) BS03 BPH ? GO:0009772 ... P0C0Y8 11526320
    24927 1jh0:L (3.5) BS04 FE ? GO:0009772 ... P0C0Y8 11526320
    24928 1jh0:L (3.5) BS05 BCL ? GO:0009772 ... P0C0Y8 11526320
    24929 1jh0:L (3.5) BS06 BPH ? GO:0009772 ... P0C0Y8 11526320
    24930 1jh0:M (3.5) BS01 BCL ? GO:0009772 ... P0C0Y9 11526320
    24931 1jh0:M (3.5) BS02 BPH ? GO:0009772 ... P0C0Y9 11526320
    24932 1jh0:M (3.5) BS03 FE ? GO:0009772 ... P0C0Y9 11526320
    24933 1jh0:M (3.5) BS04 BCL ? GO:0009772 ... P0C0Y9 11526320
    24934 1jh0:M (3.5) BS05 BCL ? GO:0009772 ... P0C0Y9 11526320
    24935 1jh0:M (3.5) BS06 BPH ? GO:0009772 ... P0C0Y9 11526320
    24936 1jh0:M (3.5) BS07 U10 ? GO:0009772 ... P0C0Y9 11526320
    24937 1jh0:M (3.5) BS08 SPO ? GO:0009772 ... P0C0Y9 11526320
    24938 1jh1:A (2.7) BS01 CA 3.4.24.34 GO:0004222 ... P22894 11563922
    24939 1jh1:A (2.7) BS02 CA 3.4.24.34 GO:0004222 ... P22894 11563922
    24940 1jh1:A (2.7) BS03 ZN 3.4.24.34 GO:0004222 ... P22894 11563922
    24941 1jh1:A (2.7) BS04 ZN 3.4.24.34 GO:0004222 ... P22894 11563922
    24942 1jh1:A (2.7) BS05 JST 3.4.24.34 GO:0004222 ... P22894 11563922
    24943 1jh4:A (-1.00) BS01 peptide ? GO:0003723 ... P11940 14685257
    24944 1jh7:A (2.4) BS01 UVC 3.1.4.37 GO:0004112 ... O04147 11694509
    24945 1jh7:A (2.4) BS02 UVC 3.1.4.37 GO:0004112 ... O04147 11694509
    24946 1jh8:A (1.8) BS01 ADE 2.4.2.21 GO:0008939 ... Q05603 11441022
    24947 1jh9:A (2.55) BS01 dna ? GO:0000976 ... P0ACP7 11781089
    24948 1jh9:A (2.55) BS02 HPA ? GO:0000976 ... P0ACP7 11781089
    24949 1jha:A (2.0) BS01 AAM 2.4.2.21 GO:0008939 ... Q05603 11441022
    24950 1jha:A (2.0) BS02 NIO 2.4.2.21 GO:0008939 ... Q05603 11441022
    24951 1jhd:A (1.7) BS01 SO4 2.7.7.4 GO:0000103 ... Q54506 11724564
    24952 1jhd:A (1.7) BS02 SO4 2.7.7.4 GO:0000103 ... Q54506 11724564
    24953 1jhd:A (1.7) BS03 SO4 2.7.7.4 GO:0000103 ... Q54506 11724564
    24954 1jhg:A (1.3) BS01 TRP ? GO:0003676 ... P0A881 8946848
    24955 1jhm:A (2.2) BS01 5MB 2.4.2.21 GO:0008939 ... Q05603 11441022
    24956 1jhn:A (2.9) BS01 CA ? GO:0005509 ... P24643 11583625
    24957 1jho:A (2.0) BS01 RMB 2.4.2.21 GO:0008939 ... Q05603 11441022
    24958 1jho:A (2.0) BS02 NIO 2.4.2.21 GO:0008939 ... Q05603 11441022
    24959 1jhp:A (2.2) BS01 5OB 2.4.2.21 GO:0008939 ... Q05603 11441022
    24960 1jhq:A (2.0) BS01 PMO 2.4.2.21 GO:0008939 ... Q05603 11441022
    24961 1jhq:A (2.0) BS02 NIO 2.4.2.21 GO:0008939 ... Q05603 11441022
    24962 1jhr:A (2.0) BS01 NIO 2.4.2.21 GO:0008939 ... Q05603 11441022
    24963 1jhr:A (2.0) BS02 P2P 2.4.2.21 GO:0008939 ... Q05603 11441022
    24964 1jht:A (2.15) BS01 peptide ? N/A P04439 11544315
    24965 1jhu:A (2.0) BS01 PCR 2.4.2.21 GO:0008939 ... Q05603 11441022
    24966 1jhv:A (2.0) BS01 PCR 2.4.2.21 GO:0008939 ... Q05603 11441022
    24967 1jhv:A (2.0) BS02 NIO 2.4.2.21 GO:0008939 ... Q05603 11441022
    24968 1jhx:A (2.0) BS01 IPH 2.4.2.21 GO:0008939 ... Q05603 11441022
    24969 1jhy:A (2.0) BS01 IPH 2.4.2.21 GO:0008939 ... Q05603 11441022
    24970 1jhy:A (2.0) BS02 NIO 2.4.2.21 GO:0008939 ... Q05603 11441022
    24971 1ji0:A (2.0) BS01 ATP ? GO:0005524 ... Q9X0M3 N/A
    24972 1ji1:A (1.6) BS01 CA 3.2.1.135 GO:0004553 ... Q60053 12051850
    24973 1ji1:A (1.6) BS02 CA 3.2.1.135 GO:0004553 ... Q60053 12051850
    24974 1ji1:A (1.6) BS03 CA 3.2.1.135 GO:0004553 ... Q60053 12051850
    24975 1ji1:B (1.6) BS01 CA 3.2.1.135 GO:0004553 ... Q60053 12051850
    24976 1ji1:B (1.6) BS02 CA 3.2.1.135 GO:0004553 ... Q60053 12051850
    24977 1ji1:B (1.6) BS03 CA 3.2.1.135 GO:0004553 ... Q60053 12051850
    24978 1ji2:A (2.3) BS01 CA 3.2.1.135 GO:0004553 ... Q08751 12051850
    24979 1ji2:B (2.3) BS01 CA 3.2.1.135 GO:0004553 ... Q08751 12051850
    24980 1ji3:A (2.2) BS01 CA 3.1.1.3 GO:0004806 ... Q9L6D3 12417199
    24981 1ji3:A (2.2) BS02 ZN 3.1.1.3 GO:0004806 ... Q9L6D3 12417199
    24982 1ji3:B (2.2) BS01 CA 3.1.1.3 GO:0004806 ... Q9L6D3 12417199
    24983 1ji3:B (2.2) BS02 ZN 3.1.1.3 GO:0004806 ... Q9L6D3 12417199
    24984 1ji4:A (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24985 1ji4:A (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24986 1ji4:B (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24987 1ji4:B (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24988 1ji4:C (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24989 1ji4:C (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24990 1ji4:D (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24991 1ji4:D (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24992 1ji4:E (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24993 1ji4:E (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24994 1ji4:F (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24995 1ji4:F (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24996 1ji4:G (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24997 1ji4:G (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24998 1ji4:H (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    24999 1ji4:H (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    25000 1ji4:I (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).