SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    25001 1ji4:I (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    25002 1ji4:J (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    25003 1ji4:J (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    25004 1ji4:K (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    25005 1ji4:K (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    25006 1ji4:L (2.52) BS01 FE 1.16.-.- GO:0005737 ... P43313 12368104
    25007 1ji4:L (2.52) BS02 FE 1.16.-.- GO:0005737 ... P43313 12368104
    25008 1ji5:A (2.5) BS01 FE 1.16.-.- GO:0005737 ... Q8RPQ2 11836250
    25009 1ji5:B (2.5) BS01 FE 1.16.-.- GO:0005737 ... Q8RPQ2 11836250
    25010 1ji5:C (2.5) BS01 FE 1.16.-.- GO:0005737 ... Q8RPQ2 11836250
    25011 1ji5:D (2.5) BS01 FE 1.16.-.- GO:0005737 ... Q8RPQ2 11836250
    25012 1jia:A (2.13) BS01 CA 3.1.1.4 GO:0004623 ... O42187 9761847
    25013 1jia:B (2.13) BS01 CA 3.1.1.4 GO:0004623 ... O42187 9761847
    25014 1jib:A (3.3) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 11330677
    25015 1jib:A (3.3) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 11330677
    25016 1jib:A (3.3) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 11330677
    25017 1jib:B (3.3) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 11330677
    25018 1jib:B (3.3) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 11330677
    25019 1jib:B (3.3) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 11330677
    25020 1jib:B (3.3) BS04 GLC 3.2.1.135 GO:0004553 ... Q08751 11330677
    25021 1jid:A (1.8) BS01 rna ? GO:0006614 ... P09132 11641499
    25022 1jie:A (1.8) BS01 BLM ? GO:0046677 ... Q53793 11706014
    25023 1jie:A (1.8) BS02 BLM ? GO:0046677 ... Q53793 11706014
    25024 1jie:B (1.8) BS01 BLM ? GO:0046677 ... Q53793 11706014
    25025 1jie:B (1.8) BS02 BLM ? GO:0046677 ... Q53793 11706014
    25026 1jif:A (1.6) BS01 BLM ? GO:0046677 ... Q53793 11706014
    25027 1jif:A (1.6) BS02 BLM ? GO:0046677 ... Q53793 11706014
    25028 1jif:B (1.6) BS01 BLM ? GO:0046677 ... Q53793 11706014
    25029 1jif:B (1.6) BS02 BLM ? GO:0046677 ... Q53793 11706014
    25030 1jig:A (1.46) BS01 FE 1.16.-.- GO:0005737 ... Q8RPQ1 11836250
    25031 1jig:A (1.46) BS02 FE 1.16.-.- GO:0005737 ... Q8RPQ1 11836250
    25032 1jig:B (1.46) BS01 FE 1.16.-.- GO:0005737 ... Q8RPQ1 11836250
    25033 1jig:B (1.46) BS02 FE 1.16.-.- GO:0005737 ... Q8RPQ1 11836250
    25034 1jig:C (1.46) BS01 FE 1.16.-.- GO:0005737 ... Q8RPQ1 11836250
    25035 1jig:C (1.46) BS02 FE 1.16.-.- GO:0005737 ... Q8RPQ1 11836250
    25036 1jig:D (1.46) BS01 FE 1.16.-.- GO:0005737 ... Q8RPQ1 11836250
    25037 1jig:D (1.46) BS02 FE 1.16.-.- GO:0005737 ... Q8RPQ1 11836250
    25038 1jii:A (3.2) BS01 383 6.1.1.1 GO:0000166 ... A6QHR2 11567092
    25039 1jij:A (3.2) BS01 629 6.1.1.1 GO:0000166 ... A6QHR2 11567092
    25040 1jik:A (2.8) BS01 545 6.1.1.1 GO:0000166 ... A6QHR2 11567092
    25041 1jil:A (2.2) BS01 485 6.1.1.1 GO:0000166 ... A6QHR2 11567092 MOAD: ic50=4nM
    25042 1jim:A (2.31) BS01 ICU 3.4.21.36 GO:0004252 ... P00772 N/A
    25043 1jin:A (2.3) BS01 HEM 1.14.15.35 GO:0004497 ... Q00441 11469860
    25044 1jin:A (2.3) BS02 KTN 1.14.15.35 GO:0004497 ... Q00441 11469860
    25045 1jio:A (2.1) BS01 HEM 1.14.15.35 GO:0004497 ... Q00441 11469860
    25046 1jio:A (2.1) BS02 DEB 1.14.15.35 GO:0004497 ... Q00441 11469860
    25047 1jip:A (2.0) BS01 HEM 1.14.15.35 GO:0004497 ... Q00441 11469860
    25048 1jip:A (2.0) BS02 KTN 1.14.15.35 GO:0004497 ... Q00441 11469860
    25049 1jir:A (2.0) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    25050 1jir:A (2.0) BS02 AML 3.4.21.4 GO:0004175 ... P00760 N/A
    25051 1jir:A (2.0) BS03 AML 3.4.21.4 GO:0004175 ... P00760 N/A
    25052 1jiu:A (2.5) BS01 UDP 2.4.1.27 GO:0006304 ... P04547 11493010
    25053 1jiv:A (2.07) BS01 UDP 2.4.1.27 GO:0006304 ... P04547 11493010
    25054 1jiw:P (1.74) BS01 ZN 3.4.24.40 GO:0001869 ... Q03023 11445573
    25055 1jiw:P (1.74) BS02 CA 3.4.24.40 GO:0001869 ... Q03023 11445573
    25056 1jiw:P (1.74) BS03 CA 3.4.24.40 GO:0001869 ... Q03023 11445573
    25057 1jiw:P (1.74) BS04 CA 3.4.24.40 GO:0001869 ... Q03023 11445573
    25058 1jiw:P (1.74) BS05 CA 3.4.24.40 GO:0001869 ... Q03023 11445573
    25059 1jiw:P (1.74) BS06 CA 3.4.24.40 GO:0001869 ... Q03023 11445573
    25060 1jiw:P (1.74) BS07 CA 3.4.24.40 GO:0001869 ... Q03023 11445573
    25061 1jiw:P (1.74) BS08 CA 3.4.24.40 GO:0001869 ... Q03023 11445573
    25062 1jiw:P (1.74) BS09 CA 3.4.24.40 GO:0001869 ... Q03023 11445573
    25063 1jix:A (1.65) BS01 UDP 2.4.1.27 GO:0006304 ... P04547 11493010
    25064 1jiz:A (2.6) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 11575929
    25065 1jiz:A (2.6) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 11575929
    25066 1jiz:A (2.6) BS03 CA 3.4.24.65 GO:0004222 ... P39900 11575929
    25067 1jiz:A (2.6) BS04 CA 3.4.24.65 GO:0004222 ... P39900 11575929
    25068 1jiz:A (2.6) BS05 CA 3.4.24.65 GO:0004222 ... P39900 11575929
    25069 1jiz:A (2.6) BS06 CGS 3.4.24.65 GO:0004222 ... P39900 11575929
    25070 1jiz:B (2.6) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 11575929
    25071 1jiz:B (2.6) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 11575929
    25072 1jiz:B (2.6) BS03 CA 3.4.24.65 GO:0004222 ... P39900 11575929
    25073 1jiz:B (2.6) BS04 CA 3.4.24.65 GO:0004222 ... P39900 11575929
    25074 1jiz:B (2.6) BS05 CA 3.4.24.65 GO:0004222 ... P39900 11575929
    25075 1jiz:B (2.6) BS06 CGS 3.4.24.65 GO:0004222 ... P39900 11575929
    25076 1jj0:A (1.9) BS01 GLC 3.2.1.17 GO:0003796 ... P00698 11679726
    25077 1jj0:A (1.9) BS02 FRU 3.2.1.17 GO:0003796 ... P00698 11679726
    25078 1jj2:1 (2.4) BS01 rna ? GO:0003735 ... P22452 11483524
    25079 1jj2:2 (2.4) BS01 rna ? GO:0003735 ... P32411 11483524
    25080 1jj2:2 (2.4) BS02 MG ? GO:0003735 ... P32411 11483524
    25081 1jj2:A (2.4) BS01 rna ? GO:0002181 ... P20276 11483524
    25082 1jj2:A (2.4) BS02 MG ? GO:0002181 ... P20276 11483524
    25083 1jj2:B (2.4) BS01 rna ? GO:0003723 ... P20279 11483524
    25084 1jj2:C (2.4) BS01 rna ? GO:0003735 ... P12735 11483524
    25085 1jj2:D (2.4) BS01 rna ? GO:0000049 ... P14124 11483524
    25086 1jj2:D (2.4) BS02 rna ? GO:0000049 ... P14124 11483524
    25087 1jj2:E (2.4) BS01 rna ? GO:0002181 ... P14135 11483524
    25088 1jj2:F (2.4) BS01 rna ? GO:0001682 ... P12743 11483524
    25089 1jj2:H (2.4) BS01 rna ? GO:0003735 ... P60617 11483524
    25090 1jj2:I (2.4) BS01 rna ? GO:0003729 ... P29198 11483524
    25091 1jj2:J (2.4) BS01 rna ? GO:0003735 ... P22450 11483524
    25092 1jj2:K (2.4) BS01 rna ? GO:0003735 ... P12737 11483524
    25093 1jj2:L (2.4) BS01 rna ? GO:0002181 ... P60618 11483524
    25094 1jj2:M (2.4) BS01 rna ? GO:0000027 ... P14123 11483524
    25095 1jj2:M (2.4) BS02 rna ? GO:0000027 ... P14123 11483524
    25096 1jj2:N (2.4) BS01 rna ? GO:0003723 ... P12733 11483524
    25097 1jj2:O (2.4) BS01 rna ? GO:0003723 ... P14119 11483524
    25098 1jj2:P (2.4) BS01 rna ? GO:0003735 ... P12734 11483524
    25099 1jj2:P (2.4) BS02 rna ? GO:0003735 ... P12734 11483524
    25100 1jj2:Q (2.4) BS01 rna ? GO:0002181 ... P10970 11483524
    25101 1jj2:R (2.4) BS01 rna ? GO:0003735 ... P12732 11483524
    25102 1jj2:S (2.4) BS01 rna ? GO:0003723 ... P10972 11483524
    25103 1jj2:S (2.4) BS02 MG ? GO:0003723 ... P10972 11483524
    25104 1jj2:T (2.4) BS01 rna ? GO:0003735 ... P14116 11483524
    25105 1jj2:U (2.4) BS01 rna ? GO:0003735 ... P10971 11483524
    25106 1jj2:V (2.4) BS01 rna ? GO:0000463 ... P14121 11483524
    25107 1jj2:V (2.4) BS02 rna ? GO:0000463 ... P14121 11483524
    25108 1jj2:W (2.4) BS01 rna ? GO:0002181 ... P18138 11483524
    25109 1jj2:X (2.4) BS01 rna ? GO:0000166 ... P12736 11483524
    25110 1jj2:X (2.4) BS02 MG ? GO:0000166 ... P12736 11483524
    25111 1jj2:Y (2.4) BS01 rna ? GO:0003735 ... P60619 11483524
    25112 1jj2:Z (2.4) BS01 rna ? GO:0003723 ... P32410 11483524
    25113 1jj4:A (2.4) BS01 dna ? GO:0003677 ... P06790 10906136
    25114 1jj4:A (2.4) BS02 dna ? GO:0003677 ... P06790 10906136
    25115 1jj4:B (2.4) BS01 dna ? GO:0003677 ... P06790 10906136
    25116 1jj4:B (2.4) BS02 dna ? GO:0003677 ... P06790 10906136
    25117 1jj6:C (2.3) BS01 dna ? GO:0000150 ... P03013 11847127
    25118 1jj6:C (2.3) BS02 dna ? GO:0000150 ... P03013 11847127
    25119 1jj7:A (2.4) BS01 ADP 7.4.2.14 GO:0005524 ... Q03518 11532960
    25120 1jj8:C (2.75) BS01 dna ? GO:0000150 ... P03013 11847127
    25121 1jj8:C (2.75) BS02 dna ? GO:0000150 ... P03013 11847127
    25122 1jj9:A (2.0) BS01 CA 3.4.24.34 GO:0004222 ... P22894 11278347
    25123 1jj9:A (2.0) BS02 CA 3.4.24.34 GO:0004222 ... P22894 11278347
    25124 1jj9:A (2.0) BS03 ZN 3.4.24.34 GO:0004222 ... P22894 11278347
    25125 1jj9:A (2.0) BS04 ZN 3.4.24.34 GO:0004222 ... P22894 11278347
    25126 1jj9:A (2.0) BS05 BBT 3.4.24.34 GO:0004222 ... P22894 11278347 MOAD: ic50=1700nM
    BindingDB: IC50=1700nM
    25127 1jjb:A (2.3) BS01 PE7 3.1.1.7 GO:0001507 ... P04058 12095250
    25128 1jjc:A (2.6) BS01 FA5 6.1.1.20 GO:0000049 ... Q5SGX2 11679717
    25129 1jjc:B (2.6) BS01 SO4 6.1.1.20 GO:0000049 ... Q5SGX1 11679717
    25130 1jjd:A (-1.00) BS01 ZN ? GO:0046872 ... P30331 11493688
    25131 1jjd:A (-1.00) BS02 ZN ? GO:0046872 ... P30331 11493688
    25132 1jjd:A (-1.00) BS03 ZN ? GO:0046872 ... P30331 11493688
    25133 1jjd:A (-1.00) BS04 ZN ? GO:0046872 ... P30331 11493688
    25134 1jje:A (1.8) BS01 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25135 1jje:A (1.8) BS02 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25136 1jje:A (1.8) BS03 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25137 1jje:A (1.8) BS04 BYS 3.5.2.6 GO:0008270 ... Q79MP6 11390410 MOAD: ic50=0.0037uM
    25138 1jje:B (1.8) BS01 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25139 1jje:B (1.8) BS02 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25140 1jje:B (1.8) BS03 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25141 1jje:B (1.8) BS04 BYS 3.5.2.6 GO:0008270 ... Q79MP6 11390410 MOAD: ic50=0.0037uM
    25142 1jjk:A (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25143 1jjk:A (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25144 1jjk:B (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25145 1jjk:B (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25146 1jjk:C (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25147 1jjk:C (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25148 1jjk:D (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25149 1jjk:D (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25150 1jjk:E (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25151 1jjk:E (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25152 1jjk:F (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25153 1jjk:F (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25154 1jjk:G (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25155 1jjk:G (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25156 1jjk:H (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25157 1jjk:H (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25158 1jjk:I (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25159 1jjk:I (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25160 1jjk:J (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25161 1jjk:J (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25162 1jjk:K (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25163 1jjk:K (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25164 1jjk:L (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25165 1jjk:L (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25166 1jjk:M (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25167 1jjk:M (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25168 1jjk:N (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25169 1jjk:N (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25170 1jjk:O (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25171 1jjk:O (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25172 1jjk:P (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25173 1jjk:P (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316
    25174 1jjt:A (1.8) BS01 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25175 1jjt:A (1.8) BS02 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25176 1jjt:A (1.8) BS03 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25177 1jjt:A (1.8) BS04 BDS 3.5.2.6 GO:0008270 ... Q79MP6 11390410 MOAD: ic50=0.009uM
    25178 1jjt:B (1.8) BS01 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25179 1jjt:B (1.8) BS02 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25180 1jjt:B (1.8) BS03 ZN 3.5.2.6 GO:0008270 ... Q79MP6 11390410
    25181 1jjt:B (1.8) BS04 BDS 3.5.2.6 GO:0008270 ... Q79MP6 11390410 MOAD: ic50=0.009uM
    25182 1jju:A (2.05) BS01 HEM ? GO:0009055 ... Q8VUT0 11717396
    25183 1jju:A (2.05) BS02 HEM ? GO:0009055 ... Q8VUT0 11717396
    25184 1jju:B (2.05) BS01 HEM ? N/A Q8VUS7 11717396
    25185 1jjv:A (2.0) BS01 ATP 2.7.1.24 GO:0004140 ... P44920 11886213
    25186 1jjw:A (1.9) BS01 K 3.4.25.2 GO:0004298 ... P43772 11717526
    25187 1jjw:B (1.9) BS01 K 3.4.25.2 GO:0004298 ... P43772 11717526
    25188 1jjw:C (1.9) BS01 K 3.4.25.2 GO:0004298 ... P43772 11717526
    25189 1jk0:A (2.8) BS01 ZN 1.17.4.1 GO:0004748 ... P09938 11526233
    25190 1jk1:A (1.9) BS01 dna ? N/A P08046 11800559
    25191 1jk1:A (1.9) BS02 dna ? N/A P08046 11800559
    25192 1jk1:A (1.9) BS03 ZN ? N/A P08046 11800559
    25193 1jk1:A (1.9) BS04 ZN ? N/A P08046 11800559
    25194 1jk1:A (1.9) BS05 ZN ? N/A P08046 11800559
    25195 1jk2:A (1.65) BS01 dna ? N/A P08046 11800559
    25196 1jk2:A (1.65) BS02 dna ? N/A P08046 11800559
    25197 1jk2:A (1.65) BS03 ZN ? N/A P08046 11800559
    25198 1jk2:A (1.65) BS04 ZN ? N/A P08046 11800559
    25199 1jk2:A (1.65) BS05 ZN ? N/A P08046 11800559
    25200 1jk3:A (1.09) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 11575928

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).