SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    254601 4okw:A (2.0) BS02 198 ? N/A P10275 25091737 BindingDB: IC50=248nM, Ki=509nM
    254602 4okx:A (2.1) BS01 peptide ? N/A P10275 25091737
    254603 4okx:A (2.1) BS02 198 ? N/A P10275 25091737 BindingDB: IC50=248nM, Ki=509nM
    254604 4okz:A (1.9) BS01 MG 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254605 4okz:A (1.9) BS02 MG 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254606 4okz:A (1.9) BS03 3E9 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254607 4okz:B (1.9) BS01 MG 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254608 4okz:B (1.9) BS02 MG 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254609 4okz:B (1.9) BS03 3E9 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254610 4okz:C (1.9) BS01 MG 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254611 4okz:C (1.9) BS02 MG 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254612 4okz:C (1.9) BS03 3E9 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254613 4okz:D (1.9) BS01 MG 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254614 4okz:D (1.9) BS02 MG 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254615 4okz:D (1.9) BS03 3E9 4.2.3.181 GO:0000287 ... B5HDJ6 24890698
    254616 4ol0:A (2.9) BS01 MG 3.6.5.- GO:0000054 ... P62826 24915079
    254617 4ol0:A (2.9) BS02 GTP 3.6.5.- GO:0000054 ... P62826 24915079
    254618 4ol7:A (1.67) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    254619 4ol7:A (1.67) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    254620 4ol7:B (1.67) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    254621 4ol7:B (1.67) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    254622 4ol8:A (3.1) BS01 rna 2.7.7.49
    2.7.7.7
    3.1.26.4
    3.4.23.-
    N/A Q99315 24608367
    254623 4ol8:A (3.1) BS02 dna 2.7.7.49
    2.7.7.7
    3.1.26.4
    3.4.23.-
    N/A Q99315 24608367
    254624 4ol8:E (3.1) BS01 rna 2.7.7.49
    2.7.7.7
    3.1.26.4
    3.4.23.-
    N/A Q99315 24608367
    254625 4ol8:E (3.1) BS02 dna 2.7.7.49
    2.7.7.7
    3.1.26.4
    3.4.23.-
    N/A Q99315 24608367
    254626 4ol8:F (3.1) BS01 dna 2.7.7.49
    2.7.7.7
    3.1.26.4
    3.4.23.-
    N/A Q99315 24608367
    254627 4ol9:A (1.85) BS01 NAP 1.1.1.169 GO:0005737 ... P9WIL1 N/A
    254628 4ola:A (2.3) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 22539551
    254629 4olb:A (2.899) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 22539551
    254630 4olb:A (2.899) BS02 TRP 3.1.26.n2 GO:0000340 ... Q9UKV8 22539551
    254631 4olb:A (2.899) BS03 TRP 3.1.26.n2 GO:0000340 ... Q9UKV8 22539551
    254632 4olc:A (2.6) BS01 DCD 2.7.2.2 GO:0005829 ... A8BB85 24558036
    254633 4olc:C (2.6) BS01 DCD 2.7.2.2 GO:0005829 ... A8BB85 24558036
    254634 4old:A (1.48) BS01 2UZ 3.5.2.6 GO:0008800 ... P00811 24791931
    254635 4old:B (1.48) BS01 2UZ 3.5.2.6 GO:0008800 ... P00811 24791931
    254636 4olf:A (2.9) BS01 ANP 6.1.1.15 GO:0000166 ... Q8I5R7 N/A
    254637 4olf:A (2.9) BS02 HFG 6.1.1.15 GO:0000166 ... Q8I5R7 N/A
    254638 4olg:A (1.71) BS01 2TV 3.5.2.6 GO:0008800 ... P00811 24791931
    254639 4olg:B (1.71) BS01 2TV 3.5.2.6 GO:0008800 ... P00811 24791931
    254640 4olh:A (2.4) BS01 2TO ? GO:0001678 ... Q14397 25001129
    254641 4olh:A (2.4) BS02 S6P ? GO:0001678 ... Q14397 25001129
    254642 4olh:B (2.4) BS01 2TO ? GO:0001678 ... Q14397 25001129
    254643 4olh:B (2.4) BS02 S6P ? GO:0001678 ... Q14397 25001129
    254644 4oli:A (2.8) BS01 2TT 2.7.10.2 GO:0004672 ... P29597 24843152
    254645 4oli:A (2.8) BS02 2TT 2.7.10.2 GO:0004672 ... P29597 24843152
    254646 4olk:A (2.694) BS01 CA ? N/A D6QY02 24831957
    254647 4olk:B (2.694) BS01 CA ? N/A D6QY02 24831957
    254648 4oll:A (1.9) BS01 CA 2.3.1.- GO:0005829 ... A0R3F9 24748621
    254649 4olm:A (2.8) BS01 peptide ? N/A P10275 25091737
    254650 4olm:A (2.8) BS02 198 ? N/A P10275 25091737 BindingDB: IC50=248nM, Ki=509nM
    254651 4oln:A (1.7) BS01 dna N/A GO:0003700 ... N/A 25259920
    254652 4oln:A (1.7) BS02 dna N/A GO:0003700 ... N/A 25259920
    254653 4oln:A (1.7) BS03 ZN N/A GO:0003700 ... N/A 25259920
    254654 4oln:A (1.7) BS04 ZN N/A GO:0003700 ... N/A 25259920
    254655 4oln:B (1.7) BS01 dna N/A GO:0003700 ... N/A 25259920
    254656 4oln:B (1.7) BS02 dna N/A GO:0003700 ... N/A 25259920
    254657 4oln:B (1.7) BS03 ZN N/A GO:0003700 ... N/A 25259920
    254658 4oln:B (1.7) BS04 ZN N/A GO:0003700 ... N/A 25259920
    254659 4ols:A (2.27) BS01 ZN ? GO:0008745 ... D6QY02 24831957
    254660 4ols:A (2.27) BS02 FE ? GO:0008745 ... D6QY02 24831957
    254661 4ols:B (2.27) BS01 ZN ? GO:0008745 ... D6QY02 24831957
    254662 4ols:C (2.27) BS01 ZN ? GO:0008745 ... D6QY02 24831957
    254663 4ols:D (2.27) BS01 ZN ? GO:0008745 ... D6QY02 24831957
    254664 4ols:D (2.27) BS02 MG ? GO:0008745 ... D6QY02 24831957
    254665 4ols:D (2.27) BS03 FE ? GO:0008745 ... D6QY02 24831957
    254666 4olt:A (1.59) BS01 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254667 4olt:A (1.59) BS02 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254668 4olt:A (1.59) BS03 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254669 4olt:A (1.59) BS04 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254670 4olt:A (1.59) BS05 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254671 4olt:A (1.59) BS06 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254672 4olt:B (1.59) BS01 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254673 4olt:B (1.59) BS02 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254674 4olt:B (1.59) BS03 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254675 4olt:B (1.59) BS04 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254676 4olt:B (1.59) BS05 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254677 4olt:B (1.59) BS06 GCS 3.2.1.132 GO:0005576 ... E1AXU1 24766439
    254678 4om8:A (1.55) BS01 NAD 1.2.1.100 GO:0006631 ... Q988C8 25446130
    254679 4om8:B (1.55) BS01 NAD 1.2.1.100 GO:0006631 ... Q988C8 25446130
    254680 4oma:A (1.6) BS01 LCS 4.4.1.11 GO:0000096 ... Q84AR1 25398880
    254681 4omb:A (1.5) BS01 PO4 N/A GO:0042301 ... G3XDA8 25223609
    254682 4omb:B (1.5) BS01 PO4 N/A GO:0042301 ... G3XDA8 25223609
    254683 4omb:C (1.5) BS01 PO4 N/A GO:0042301 ... G3XDA8 25223609
    254684 4omb:D (1.5) BS01 PO4 N/A GO:0042301 ... G3XDA8 25223609
    254685 4omc:A (2.3) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254686 4omc:A (2.3) BS02 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254687 4omc:A (2.3) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254688 4omc:A (2.3) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254689 4omc:A (2.3) BS05 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254690 4omc:B (2.3) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254691 4omc:B (2.3) BS02 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254692 4omc:B (2.3) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254693 4omc:B (2.3) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254694 4omc:B (2.3) BS05 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254695 4omc:C (2.3) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254696 4omc:C (2.3) BS02 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254697 4omc:C (2.3) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254698 4omc:C (2.3) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254699 4omc:C (2.3) BS05 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254700 4omc:D (2.3) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254701 4omc:D (2.3) BS02 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254702 4omc:D (2.3) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254703 4omc:D (2.3) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254704 4omc:D (2.3) BS05 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254705 4omc:E (2.3) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254706 4omc:E (2.3) BS02 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254707 4omc:E (2.3) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254708 4omc:E (2.3) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254709 4omc:E (2.3) BS05 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254710 4omc:F (2.3) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254711 4omc:F (2.3) BS02 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254712 4omc:F (2.3) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254713 4omc:F (2.3) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254714 4omd:A (2.7) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254715 4omd:A (2.7) BS02 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254716 4omd:A (2.7) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254717 4omd:A (2.7) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254718 4omd:A (2.7) BS05 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254719 4omd:B (2.7) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254720 4omd:B (2.7) BS02 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254721 4omd:B (2.7) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254722 4omd:B (2.7) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254723 4omd:B (2.7) BS05 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254724 4omd:C (2.7) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254725 4omd:C (2.7) BS02 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254726 4omd:C (2.7) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254727 4omd:C (2.7) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254728 4omd:C (2.7) BS05 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254729 4omd:D (2.7) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254730 4omd:D (2.7) BS02 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254731 4omd:D (2.7) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254732 4omd:D (2.7) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254733 4omd:D (2.7) BS05 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254734 4omd:E (2.7) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254735 4omd:E (2.7) BS02 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254736 4omd:E (2.7) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254737 4omd:E (2.7) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254738 4omd:E (2.7) BS05 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254739 4omd:F (2.7) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 24666235
    254740 4omd:F (2.7) BS02 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254741 4omd:F (2.7) BS03 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254742 4omd:F (2.7) BS04 CA 3.4.21.75 GO:0004252 ... P09958 24666235
    254743 4ome:A (1.79) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 N/A
    254744 4ome:A (1.79) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 N/A
    254745 4ome:A (1.79) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 N/A
    254746 4ome:A (1.79) BS04 DGQ 3.4.17.21 GO:0004180 ... Q04609 N/A
    254747 4omf:A (1.71) BS01 SF4 1.12.98.1 GO:0008901 ... D9PYF9 24887099
    254748 4omf:A (1.71) BS02 NFU 1.12.98.1 GO:0008901 ... D9PYF9 24887099
    254749 4omf:A (1.71) BS03 MG 1.12.98.1 GO:0008901 ... D9PYF9 24887099
    254750 4omf:B (1.71) BS01 SF4 1.12.98.1 GO:0016151 ... D9PYF6 24887099
    254751 4omf:B (1.71) BS02 UNK 1.12.98.1 GO:0016151 ... D9PYF6 24887099
    254752 4omf:B (1.71) BS03 FAD 1.12.98.1 GO:0016151 ... D9PYF6 24887099
    254753 4omf:G (1.71) BS01 SF4 1.12.98.1 GO:0016151 ... D9PYF7 24887099
    254754 4omf:G (1.71) BS02 SF4 1.12.98.1 GO:0016151 ... D9PYF7 24887099
    254755 4omf:G (1.71) BS03 SF4 1.12.98.1 GO:0016151 ... D9PYF7 24887099
    254756 4omf:G (1.71) BS04 DTZ 1.12.98.1 GO:0016151 ... D9PYF7 24887099
    254757 4omj:A (1.6) BS01 2TX ? N/A O76054 25987292 MOAD: Kd=5.44uM
    254758 4omj:B (1.6) BS01 2TX ? N/A O76054 25987292 MOAD: Kd=5.44uM
    254759 4omk:A (1.75) BS01 SQL ? N/A O76054 25987292 MOAD: Kd=40.1uM
    254760 4omk:B (1.75) BS01 SQL ? N/A O76054 25987292 MOAD: Kd=40.1uM
    254761 4omr:A (1.85) BS01 CAA 4.2.1.17 GO:0003824 ... Q47NQ8 N/A
    254762 4omw:C (2.3) BS01 SO4 ? GO:0005576 ... P02756 25450833
    254763 4omw:C (2.3) BS02 SO4 ? GO:0005576 ... P02756 25450833
    254764 4omw:D (2.3) BS01 TE4 ? GO:0005576 ... P02756 25450833
    254765 4omx:A (2.3) BS01 SO4 ? GO:0005576 ... P02756 25450833
    254766 4omx:A (2.3) BS02 SO4 ? GO:0005576 ... P02756 25450833
    254767 4omx:A (2.3) BS03 ARF ? GO:0005576 ... P02756 25450833
    254768 4omx:A (2.3) BS04 ARF ? GO:0005576 ... P02756 25450833
    254769 4omy:A (3.062) BS01 dna ? GO:0003700 ... Q83TD2 24733893
    254770 4omy:A (3.062) BS02 dna ? GO:0003700 ... Q83TD2 24733893
    254771 4omy:B (3.062) BS01 dna ? GO:0003700 ... Q83TD2 24733893
    254772 4omy:B (3.062) BS02 dna ? GO:0003700 ... Q83TD2 24733893
    254773 4omy:C (3.062) BS01 dna ? GO:0003700 ... Q83TD2 24733893
    254774 4omy:C (3.062) BS02 dna ? GO:0003700 ... Q83TD2 24733893
    254775 4omy:D (3.062) BS01 dna ? GO:0003700 ... Q83TD2 24733893
    254776 4omy:D (3.062) BS02 dna ? GO:0003700 ... Q83TD2 24733893
    254777 4on0:A (3.0) BS01 dna ? GO:0003700 ... Q83TD2 24733893
    254778 4on0:A (3.0) BS02 dna ? GO:0003700 ... Q83TD2 24733893
    254779 4on0:B (3.0) BS01 dna ? GO:0003700 ... Q83TD2 24733893
    254780 4on0:B (3.0) BS02 dna ? GO:0003700 ... Q83TD2 24733893
    254781 4on0:C (3.0) BS01 dna ? GO:0003700 ... Q83TD2 24733893
    254782 4on0:C (3.0) BS02 dna ? GO:0003700 ... Q83TD2 24733893
    254783 4on0:D (3.0) BS01 dna ? GO:0003700 ... Q83TD2 24733893
    254784 4on0:D (3.0) BS02 dna ? GO:0003700 ... Q83TD2 24733893
    254785 4on1:A (2.13) BS01 ZN ? GO:0004222 ... O68424 24698179
    254786 4on1:B (2.13) BS01 ZN ? GO:0004222 ... O68424 24698179
    254787 4ona:A (2.4) BS01 UW1 2.7.11.17 GO:0000166 ... Q9BJF5 24494061 MOAD: ic50=0.002uM
    BindingDB: IC50=2.00nM
    254788 4onc:A (1.83) BS01 40B 2.5.1.86
    2.5.1.87
    GO:0000287 ... P9WFF7 24475925 MOAD: Kd=410nM
    254789 4onc:B (1.83) BS01 40B 2.5.1.86
    2.5.1.87
    GO:0000287 ... P9WFF7 24475925 MOAD: Kd=410nM
    254790 4onc:B (1.83) BS02 40B 2.5.1.86
    2.5.1.87
    GO:0000287 ... P9WFF7 24475925 MOAD: Kd=410nM
    254791 4ond:A (2.253) BS01 dna N/A GO:0003700 ... N/A 25259920
    254792 4ond:A (2.253) BS02 dna N/A GO:0003700 ... N/A 25259920
    254793 4ond:A (2.253) BS03 ZN N/A GO:0003700 ... N/A 25259920
    254794 4ond:A (2.253) BS04 ZN N/A GO:0003700 ... N/A 25259920
    254795 4ond:B (2.253) BS01 dna N/A GO:0003700 ... N/A 25259920
    254796 4ond:B (2.253) BS02 dna N/A GO:0003700 ... N/A 25259920
    254797 4ond:B (2.253) BS03 ZN N/A GO:0003700 ... N/A 25259920
    254798 4ond:B (2.253) BS04 ZN N/A GO:0003700 ... N/A 25259920
    254799 4ond:E (2.253) BS01 dna N/A GO:0003700 ... N/A 25259920
    254800 4ond:E (2.253) BS02 dna N/A GO:0003700 ... N/A 25259920

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).