SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    25401 1jmj:A (2.35) BS01 CA ? GO:0004866 ... P05546 12169660
    25402 1jml:A (1.9) BS01 ZN ? N/A Q51912 11526208
    25403 1jml:A (1.9) BS02 ZN ? N/A Q51912 11526208
    25404 1jml:A (1.9) BS03 ZN ? N/A Q51912 11526208
    25405 1jmq:A (-1.00) BS01 peptide ? N/A P46937 11743730
    25406 1jms:A (2.36) BS01 MG 2.7.7.31
    3.1.11.-
    GO:0003677 ... P09838 11823435
    25407 1jmt:A (2.2) BS01 peptide ? GO:0000398 ... Q01081 11551507
    25408 1jmu:G (2.8) BS01 ZN ? GO:0003723 ... P07939 11832217
    25409 1jmu:H (2.8) BS01 ZN ? GO:0003723 ... P07939 11832217
    25410 1jmu:I (2.8) BS01 ZN ? GO:0003723 ... P07939 11832217
    25411 1jmx:A (1.9) BS01 HEC ? GO:0009055 ... Q8VW85 11704672
    25412 1jmx:A (1.9) BS02 HEC ? GO:0009055 ... Q8VW85 11704672
    25413 1jmx:B (1.9) BS01 HEC ? N/A Q8VW82 11704672
    25414 1jmz:A (2.0) BS01 HEC ? GO:0009055 ... Q8VW85 11704672
    25415 1jmz:A (2.0) BS02 HEC ? GO:0009055 ... Q8VW85 11704672
    25416 1jmz:B (2.0) BS01 HEC ? N/A Q8VW82 11704672
    25417 1jmz:B (2.0) BS02 PND ? N/A Q8VW82 11704672
    25418 1jmz:G (2.0) BS01 PND 1.4.9.- GO:0016638 ... P0A182 11704672
    25419 1jn0:A (3.0) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 11846565
    25420 1jn0:B (3.0) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 11846565
    25421 1jn0:O (3.0) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 11846565
    25422 1jn1:A (2.9) BS01 CO 4.6.1.12 GO:0008685 ... P44815 12211023
    25423 1jn1:B (2.9) BS01 CO 4.6.1.12 GO:0008685 ... P44815 12211023
    25424 1jn1:C (2.9) BS01 CO 4.6.1.12 GO:0008685 ... P44815 12211023
    25425 1jn1:C (2.9) BS02 CO 4.6.1.12 GO:0008685 ... P44815 12211023
    25426 1jn2:P (1.9) BS01 CA ? GO:0030246 ... P02866 11504727
    25427 1jn2:P (1.9) BS02 MN ? GO:0030246 ... P02866 11504727
    25428 1jn2:P (1.9) BS03 SFP ? GO:0030246 ... P02866 11504727 MOAD: Ka=12200M^-1
    25429 1jn4:A (1.8) BS01 139 4.6.1.18 GO:0003676 ... P61823 11513604 MOAD: Ki=11.3uM
    25430 1jn5:B (2.8) BS01 peptide ? GO:0005634 ... Q9UBU9 11583626
    25431 1jn7:A (-1.00) BS01 ZN ? GO:0006357 ... Q9VPQ6 12110675
    25432 1jn9:A (2.3) BS01 CA 3.4.19.5 GO:0016787 ... P37595 18323626
    25433 1jne:A (1.7) BS01 MAN ? GO:0004568 ... Q9V3D4 11821393
    25434 1jnf:A (2.6) BS01 CO3 ? GO:0005576 ... P19134 11752780
    25435 1jnf:A (2.6) BS02 CO3 ? GO:0005576 ... P19134 11752780
    25436 1jnf:A (2.6) BS03 FE ? GO:0005576 ... P19134 11752780
    25437 1jnf:A (2.6) BS04 FE ? GO:0005576 ... P19134 11752780
    25438 1jnh:A (2.85) BS01 ECO ? GO:0003823 ... P01843 11812141
    25439 1jnh:B (2.85) BS01 ECO N/A N/A N/A 11812141
    25440 1jnh:D (2.85) BS01 ECO N/A N/A N/A 11812141
    25441 1jnh:D (2.85) BS02 ECO N/A N/A N/A 11812141
    25442 1jnh:E (2.85) BS01 ECO ? GO:0003823 ... P01843 11812141
    25443 1jnh:F (2.85) BS01 ECO N/A N/A N/A 11812141
    25444 1jnh:F (2.85) BS02 ECO N/A N/A N/A 11812141
    25445 1jnh:H (2.85) BS01 ECO N/A N/A N/A 11812141
    25446 1jni:A (1.25) BS01 HEC ? GO:0009061 ... P44654 11939777
    25447 1jni:A (1.25) BS02 HEC ? GO:0009061 ... P44654 11939777
    25448 1jnk:A (2.3) BS01 ANP 2.7.11.24 GO:0000165 ... P53779 9739089
    25449 1jnm:A (2.2) BS01 dna ? GO:0003677 ... P05412 N/A
    25450 1jnm:A (2.2) BS02 dna ? GO:0003677 ... P05412 N/A
    25451 1jnm:B (2.2) BS01 dna ? GO:0003677 ... P05412 N/A
    25452 1jnm:B (2.2) BS02 dna ? GO:0003677 ... P05412 N/A
    25453 1jnn:H (3.2) BS01 EST ? N/A Q99LC4 11812141
    25454 1jnn:L (3.2) BS01 EST ? GO:0002250 ... P01837 11812141
    25455 1jnq:A (2.1) BS01 FE2 1.13.11.58 GO:0005506 ... P09186 12964012
    25456 1jnq:A (2.1) BS02 EGT 1.13.11.58 GO:0005506 ... P09186 12964012
    25457 1jnr:A (1.6) BS01 FAD 1.8.99.2 GO:0000104 ... O28603 11842205
    25458 1jnr:B (1.6) BS01 SF4 1.8.99.2 GO:0016491 ... O28604 11842205
    25459 1jnr:B (1.6) BS02 SF4 1.8.99.2 GO:0016491 ... O28604 11842205
    25460 1jnr:C (1.6) BS01 FAD 1.8.99.2 GO:0000104 ... O28603 11842205
    25461 1jnr:D (1.6) BS01 SF4 1.8.99.2 GO:0016491 ... O28604 11842205
    25462 1jnr:D (1.6) BS02 SF4 1.8.99.2 GO:0016491 ... O28604 11842205
    25463 1jnu:A (2.6) BS01 FMN 2.7.11.1 N/A Q9ZWQ6 12034897
    25464 1jnu:B (2.6) BS01 FMN 2.7.11.1 N/A Q9ZWQ6 12034897
    25465 1jnu:C (2.6) BS01 FMN 2.7.11.1 N/A Q9ZWQ6 12034897
    25466 1jnu:D (2.6) BS01 FMN 2.7.11.1 N/A Q9ZWQ6 12034897
    25467 1jnw:A (2.07) BS01 PO4 1.4.3.5 GO:0004733 ... P0AFI7 11786019
    25468 1jnw:A (2.07) BS02 FMN 1.4.3.5 GO:0004733 ... P0AFI7 11786019
    25469 1jnw:A (2.07) BS03 PLP 1.4.3.5 GO:0004733 ... P0AFI7 11786019
    25470 1jny:A (1.8) BS01 GDP ? GO:0000287 ... P35021 11574461
    25471 1jny:B (1.8) BS01 GDP ? GO:0000287 ... P35021 11574461
    25472 1jnz:A (2.5) BS01 SO3 1.8.99.2 GO:0000104 ... O28603 11842205
    25473 1jnz:A (2.5) BS02 FAD 1.8.99.2 GO:0000104 ... O28603 11842205
    25474 1jnz:B (2.5) BS01 SF4 1.8.99.2 GO:0016491 ... O28604 11842205
    25475 1jnz:B (2.5) BS02 SF4 1.8.99.2 GO:0016491 ... O28604 11842205
    25476 1jnz:C (2.5) BS01 SO3 1.8.99.2 GO:0000104 ... O28603 11842205
    25477 1jnz:C (2.5) BS02 FAD 1.8.99.2 GO:0000104 ... O28603 11842205
    25478 1jnz:D (2.5) BS01 SF4 1.8.99.2 GO:0016491 ... O28604 11842205
    25479 1jnz:D (2.5) BS02 SF4 1.8.99.2 GO:0016491 ... O28604 11842205
    25480 1joa:A (2.8) BS01 FAD 1.11.1.1 GO:0016491 ... P37062 8756456
    25481 1job:A (2.4) BS01 ZN ? GO:0001669 ... Q64288 12054872
    25482 1job:A (2.4) BS02 ZN ? GO:0001669 ... Q64288 12054872
    25483 1joc:A (2.2) BS01 ZN ? GO:0046872 ... Q15075 11741531
    25484 1joc:A (2.2) BS02 ZN ? GO:0046872 ... Q15075 11741531
    25485 1joc:A (2.2) BS03 ITP ? GO:0046872 ... Q15075 11741531 MOAD: Kd=24uM
    25486 1joc:B (2.2) BS01 ZN ? GO:0046872 ... Q15075 11741531
    25487 1joc:B (2.2) BS02 ZN ? GO:0046872 ... Q15075 11741531
    25488 1joc:B (2.2) BS03 ITP ? GO:0046872 ... Q15075 11741531 MOAD: Kd=24uM
    25489 1jod:A (3.2) BS01 ZN ? GO:0001669 ... Q64288 12054872
    25490 1jod:B (3.2) BS01 ZN ? GO:0001669 ... Q64288 12054872
    25491 1jod:B (3.2) BS02 ZN ? GO:0001669 ... Q64288 12054872
    25492 1joe:A (2.4) BS01 ZN 4.4.1.21 GO:0005506 ... P44007 N/A
    25493 1joe:B (2.4) BS01 ZN 4.4.1.21 GO:0005506 ... P44007 N/A
    25494 1joe:C (2.4) BS01 ZN 4.4.1.21 GO:0005506 ... P44007 N/A
    25495 1joe:D (2.4) BS01 ZN 4.4.1.21 GO:0005506 ... P44007 N/A
    25496 1jof:B (2.5) BS01 PIN 5.5.1.5 GO:0017057 ... P38677 11937053
    25497 1jof:H (2.5) BS01 PIN 5.5.1.5 GO:0017057 ... P38677 11937053
    25498 1joi:A (2.05) BS01 CU ? GO:0005507 ... P80546 8109977
    25499 1joj:A (3.0) BS01 peptide ? GO:0030246 ... P55915 11580281
    25500 1joj:A (3.0) BS02 MN ? GO:0030246 ... P55915 11580281
    25501 1joj:A (3.0) BS03 CA ? GO:0030246 ... P55915 11580281
    25502 1joj:B (3.0) BS01 peptide ? GO:0030246 ... P55915 11580281
    25503 1joj:B (3.0) BS02 MN ? GO:0030246 ... P55915 11580281
    25504 1joj:B (3.0) BS03 CA ? GO:0030246 ... P55915 11580281
    25505 1joj:C (3.0) BS01 peptide ? GO:0030246 ... P55915 11580281
    25506 1joj:C (3.0) BS02 MN ? GO:0030246 ... P55915 11580281
    25507 1joj:C (3.0) BS03 CA ? GO:0030246 ... P55915 11580281
    25508 1joj:D (3.0) BS01 peptide ? GO:0030246 ... P55915 11580281
    25509 1joj:D (3.0) BS02 MN ? GO:0030246 ... P55915 11580281
    25510 1joj:D (3.0) BS03 CA ? GO:0030246 ... P55915 11580281
    25511 1jok:A (-1.00) BS01 THP 3.1.31.1 GO:0003676 ... P00644 9369015
    25512 1jol:A (1.96) BS01 FFO 1.5.1.3 GO:0004146 ... P0ABQ4 8679526
    25513 1jol:B (1.96) BS01 FFO 1.5.1.3 GO:0004146 ... P0ABQ4 8679526
    25514 1jom:A (1.9) BS01 CA 1.5.1.3 GO:0004146 ... P0ABQ4 8679526
    25515 1jom:A (1.9) BS02 FFO 1.5.1.3 GO:0004146 ... P0ABQ4 8679526
    25516 1joq:A (-1.00) BS01 THP 3.1.31.1 GO:0003676 ... P00644 9369015
    25517 1jot:A (2.2) BS01 peptide ? GO:0030246 ... P18674 9497359
    25518 1jou:B (1.8) BS01 NA 3.4.21.5 GO:0004252 ... P00734 12679024
    25519 1jou:D (1.8) BS01 NA 3.4.21.5 GO:0004252 ... P00734 12679024
    25520 1jou:F (1.8) BS01 NA 3.4.21.5 GO:0004252 ... P00734 12679024
    25521 1jp3:A (1.8) BS01 EGC 2.5.1.31 GO:0000287 ... P60472 11581264
    25522 1jp4:A (1.69) BS01 PO4 3.1.3.57
    3.1.3.7
    GO:0000287 ... Q9Z1N4 11812139
    25523 1jp4:A (1.69) BS02 MG 3.1.3.57
    3.1.3.7
    GO:0000287 ... Q9Z1N4 11812139
    25524 1jp4:A (1.69) BS03 MG 3.1.3.57
    3.1.3.7
    GO:0000287 ... Q9Z1N4 11812139
    25525 1jp4:A (1.69) BS04 AMP 3.1.3.57
    3.1.3.7
    GO:0000287 ... Q9Z1N4 11812139
    25526 1jp5:A (2.7) BS01 peptide N/A N/A N/A 11591344
    25527 1jp5:B (2.7) BS01 peptide N/A N/A N/A 11591344
    25528 1jp6:A (2.3) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11796110
    25529 1jp7:A (1.8) BS01 SO4 2.4.2.1
    2.4.2.28
    GO:0003824 ... P50389 11489901
    25530 1jp7:B (1.8) BS01 SO4 2.4.2.1
    2.4.2.28
    GO:0003824 ... P50389 11489901
    25531 1jp7:C (1.8) BS01 SO4 2.4.2.1
    2.4.2.28
    GO:0003824 ... P50389 11489901
    25532 1jp8:A (2.3) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11796110
    25533 1jp9:A (1.7) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11796110
    25534 1jpa:A (1.91) BS01 ANP 2.7.10.1 GO:0004672 ... P54763 11572780
    25535 1jpa:B (1.91) BS01 ANP 2.7.10.1 GO:0004672 ... P54763 11572780
    25536 1jpb:A (1.7) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11796110
    25537 1jpc:A (2.0) BS01 MAN ? N/A P30617 8939757
    25538 1jpc:A (2.0) BS02 MAN ? N/A P30617 8939757
    25539 1jpc:A (2.0) BS03 MAN ? N/A P30617 8939757
    25540 1jpc:A (2.0) BS04 MAN ? N/A P30617 8939757
    25541 1jpc:A (2.0) BS05 MAN ? N/A P30617 8939757
    25542 1jpf:A (2.18) BS01 peptide ? N/A P01899 11580250
    25543 1jpg:A (2.2) BS01 peptide ? N/A P01899 11580250
    25544 1jpj:A (2.3) BS01 GNP 3.6.5.4 GO:0003924 ... O07347 11566135
    25545 1jpl:A (2.4) BS01 peptide ? GO:0005802 ... Q9NZ52 11859375
    25546 1jpl:B (2.4) BS01 peptide ? GO:0005802 ... Q9NZ52 11859375
    25547 1jpl:C (2.4) BS01 peptide ? GO:0005802 ... Q9NZ52 11859375
    25548 1jpl:D (2.4) BS01 peptide ? GO:0005802 ... Q9NZ52 11859375
    25549 1jpm:A (2.25) BS01 MG 5.1.1.20 GO:0000287 ... O34508 11747448
    25550 1jpm:B (2.25) BS01 MG 5.1.1.20 GO:0000287 ... O34508 11747448
    25551 1jpm:C (2.25) BS01 MG 5.1.1.20 GO:0000287 ... O34508 11747448
    25552 1jpm:D (2.25) BS01 MG 5.1.1.20 GO:0000287 ... O34508 11747448
    25553 1jpn:A (1.9) BS01 GNP 3.6.5.4 GO:0003924 ... O07347 11566135
    25554 1jpn:B (1.9) BS01 GNP 3.6.5.4 GO:0003924 ... O07347 11566135
    25555 1jpp:A (3.1) BS01 peptide ? GO:0007155 ... Q02248 11707392
    25556 1jpp:B (3.1) BS01 peptide ? GO:0007155 ... Q02248 11707392
    25557 1jpr:A (1.88) BS01 MN 1.17.4.1 GO:0004748 ... P69924 11315567
    25558 1jpr:A (1.88) BS02 MN 1.17.4.1 GO:0004748 ... P69924 11315567
    25559 1jpr:B (1.88) BS01 MN 1.17.4.1 GO:0004748 ... P69924 11315567
    25560 1jpr:B (1.88) BS02 MN 1.17.4.1 GO:0004748 ... P69924 11315567
    25561 1jpu:A (1.8) BS01 ZN 1.1.1.6 GO:0005829 ... P32816 11566129
    25562 1jpu:A (1.8) BS02 ZN 1.1.1.6 GO:0005829 ... P32816 11566129
    25563 1jpv:A (1.8) BS01 SO4 2.4.2.1
    2.4.2.28
    GO:0003824 ... P50389 11489901
    25564 1jpv:B (1.8) BS01 SO4 2.4.2.1
    2.4.2.28
    GO:0003824 ... P50389 11489901
    25565 1jpv:C (1.8) BS01 SO4 2.4.2.1
    2.4.2.28
    GO:0003824 ... P50389 11489901
    25566 1jpw:A (2.5) BS01 peptide ? GO:0007155 ... P35222 11713476
    25567 1jpw:B (2.5) BS01 peptide ? GO:0007155 ... P35222 11713476
    25568 1jpw:C (2.5) BS01 peptide ? GO:0007155 ... P35222 11713476
    25569 1jpz:A (1.65) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 11695892
    25570 1jpz:A (1.65) BS02 140 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 11695892 MOAD: Kd=262nM
    BindingDB: Kd=82nM
    25571 1jpz:B (1.65) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 11695892
    25572 1jpz:B (1.65) BS02 140 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 11695892 MOAD: Kd=262nM
    BindingDB: Kd=82nM
    25573 1jq3:A (1.8) BS01 AAT 2.5.1.16 GO:0003824 ... Q9WZC2 11731804 MOAD: ic50=0.2uM
    25574 1jq3:C (1.8) BS01 AAT 2.5.1.16 GO:0003824 ... Q9WZC2 11731804 MOAD: ic50=0.2uM
    25575 1jq3:D (1.8) BS01 AAT 2.5.1.16 GO:0003824 ... Q9WZC2 11731804 MOAD: ic50=0.2uM
    25576 1jq4:A (-1.00) BS01 FES 1.14.13.25 GO:0051536 ... P22868 11772001
    25577 1jq5:A (1.7) BS01 ZN 1.1.1.6 GO:0005829 ... P32816 11566129
    25578 1jq5:A (1.7) BS02 ZN 1.1.1.6 GO:0005829 ... P32816 11566129
    25579 1jq5:A (1.7) BS03 NAD 1.1.1.6 GO:0005829 ... P32816 11566129
    25580 1jq7:A (3.0) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 11524687
    25581 1jq7:B (3.0) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 11524687
    25582 1jq8:A (2.0) BS01 peptide 3.1.1.4 GO:0004623 ... P59071 12351825
    25583 1jq8:B (2.0) BS01 peptide 3.1.1.4 GO:0004623 ... P59071 12351825
    25584 1jq9:A (1.8) BS01 peptide 3.1.1.4 GO:0004623 ... P59071 12186870
    25585 1jq9:B (1.8) BS01 peptide 3.1.1.4 GO:0004623 ... P59071 12186870
    25586 1jqa:A (2.05) BS01 ZN 1.1.1.6 GO:0005829 ... P32816 11566129
    25587 1jqa:A (2.05) BS02 ZN 1.1.1.6 GO:0005829 ... P32816 11566129
    25588 1jqa:A (2.05) BS03 GOL 1.1.1.6 GO:0005829 ... P32816 11566129
    25589 1jqb:A (1.97) BS01 ZN 1.1.1.80 GO:0008270 ... P25984 12381840
    25590 1jqb:B (1.97) BS01 ZN 1.1.1.80 GO:0008270 ... P25984 12381840
    25591 1jqb:C (1.97) BS01 ZN 1.1.1.80 GO:0008270 ... P25984 12381840
    25592 1jqb:D (1.97) BS01 ZN 1.1.1.80 GO:0008270 ... P25984 12381840
    25593 1jqc:A (1.61) BS01 MN 1.17.4.1 GO:0004748 ... P69924 11315567
    25594 1jqc:A (1.61) BS02 MN 1.17.4.1 GO:0004748 ... P69924 11315567
    25595 1jqc:B (1.61) BS01 MN 1.17.4.1 GO:0004748 ... P69924 11315567
    25596 1jqc:B (1.61) BS02 MN 1.17.4.1 GO:0004748 ... P69924 11315567
    25597 1jqd:A (2.28) BS01 SAH 2.1.1.8 GO:0001692 ... P50135 11566133 MOAD: Ki=6.9uM
    BindingDB: Ki=18100nM
    25598 1jqd:A (2.28) BS02 HSM 2.1.1.8 GO:0001692 ... P50135 11566133
    25599 1jqd:B (2.28) BS01 SAH 2.1.1.8 GO:0001692 ... P50135 11566133 MOAD: Ki=6.9uM
    BindingDB: Ki=18100nM
    25600 1jqd:B (2.28) BS02 HSM 2.1.1.8 GO:0001692 ... P50135 11566133

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).