SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    256801 4p90:B (2.49) BS01 2K0 2.7.11.1 GO:0004672 ... Q13153 N/A
    256802 4p92:A (1.65) BS01 SO4 3.1.1.45 GO:0008806 ... P0A114 25005082
    256803 4p99:A (1.8) BS01 CA ? N/A A0A075B5G5 24892750
    256804 4p99:A (1.8) BS02 CA ? N/A A0A075B5G5 24892750
    256805 4p99:A (1.8) BS03 CA ? N/A A0A075B5G5 24892750
    256806 4p99:A (1.8) BS04 CA ? N/A A0A075B5G5 24892750
    256807 4p99:A (1.8) BS05 CA ? N/A A0A075B5G5 24892750
    256808 4p99:A (1.8) BS06 CA ? N/A A0A075B5G5 24892750
    256809 4p99:A (1.8) BS07 CA ? N/A A0A075B5G5 24892750
    256810 4p99:A (1.8) BS08 CA ? N/A A0A075B5G5 24892750
    256811 4p99:A (1.8) BS09 CA ? N/A A0A075B5G5 24892750
    256812 4p99:A (1.8) BS10 CA ? N/A A0A075B5G5 24892750
    256813 4p99:A (1.8) BS11 CA ? N/A A0A075B5G5 24892750
    256814 4p99:A (1.8) BS12 CA ? N/A A0A075B5G5 24892750
    256815 4p99:A (1.8) BS13 CA ? N/A A0A075B5G5 24892750
    256816 4p99:A (1.8) BS14 CA ? N/A A0A075B5G5 24892750
    256817 4p99:A (1.8) BS15 CA ? N/A A0A075B5G5 24892750
    256818 4p99:A (1.8) BS16 CA ? N/A A0A075B5G5 24892750
    256819 4p99:A (1.8) BS17 CA ? N/A A0A075B5G5 24892750
    256820 4p99:B (1.8) BS01 CA ? N/A A0A075B5G5 24892750
    256821 4p99:B (1.8) BS02 CA ? N/A A0A075B5G5 24892750
    256822 4p99:B (1.8) BS03 CA ? N/A A0A075B5G5 24892750
    256823 4p99:B (1.8) BS04 CA ? N/A A0A075B5G5 24892750
    256824 4p99:B (1.8) BS05 CA ? N/A A0A075B5G5 24892750
    256825 4p99:B (1.8) BS06 CA ? N/A A0A075B5G5 24892750
    256826 4p99:B (1.8) BS07 CA ? N/A A0A075B5G5 24892750
    256827 4p99:B (1.8) BS08 CA ? N/A A0A075B5G5 24892750
    256828 4p99:B (1.8) BS09 CA ? N/A A0A075B5G5 24892750
    256829 4p99:B (1.8) BS10 CA ? N/A A0A075B5G5 24892750
    256830 4p99:B (1.8) BS11 CA ? N/A A0A075B5G5 24892750
    256831 4p99:B (1.8) BS12 CA ? N/A A0A075B5G5 24892750
    256832 4p99:B (1.8) BS13 CA ? N/A A0A075B5G5 24892750
    256833 4p99:B (1.8) BS14 CA ? N/A A0A075B5G5 24892750
    256834 4p99:B (1.8) BS15 CA ? N/A A0A075B5G5 24892750
    256835 4p99:B (1.8) BS16 CA ? N/A A0A075B5G5 24892750
    256836 4p99:C (1.8) BS01 CA ? N/A A0A075B5G5 24892750
    256837 4p99:C (1.8) BS02 CA ? N/A A0A075B5G5 24892750
    256838 4p99:C (1.8) BS03 CA ? N/A A0A075B5G5 24892750
    256839 4p99:C (1.8) BS04 CA ? N/A A0A075B5G5 24892750
    256840 4p99:C (1.8) BS05 CA ? N/A A0A075B5G5 24892750
    256841 4p99:C (1.8) BS06 CA ? N/A A0A075B5G5 24892750
    256842 4p99:C (1.8) BS07 CA ? N/A A0A075B5G5 24892750
    256843 4p99:C (1.8) BS08 CA ? N/A A0A075B5G5 24892750
    256844 4p99:C (1.8) BS09 CA ? N/A A0A075B5G5 24892750
    256845 4p99:C (1.8) BS10 CA ? N/A A0A075B5G5 24892750
    256846 4p99:C (1.8) BS11 CA ? N/A A0A075B5G5 24892750
    256847 4p99:C (1.8) BS12 CA ? N/A A0A075B5G5 24892750
    256848 4p99:C (1.8) BS13 CA ? N/A A0A075B5G5 24892750
    256849 4p99:C (1.8) BS14 CA ? N/A A0A075B5G5 24892750
    256850 4p99:C (1.8) BS15 CA ? N/A A0A075B5G5 24892750
    256851 4p99:C (1.8) BS16 CA ? N/A A0A075B5G5 24892750
    256852 4p99:C (1.8) BS17 CA ? N/A A0A075B5G5 24892750
    256853 4p99:C (1.8) BS18 CA ? N/A A0A075B5G5 24892750
    256854 4p99:C (1.8) BS19 CA ? N/A A0A075B5G5 24892750
    256855 4p99:D (1.8) BS01 CA ? N/A A0A075B5G5 24892750
    256856 4p99:D (1.8) BS02 CA ? N/A A0A075B5G5 24892750
    256857 4p99:D (1.8) BS03 CA ? N/A A0A075B5G5 24892750
    256858 4p99:D (1.8) BS04 CA ? N/A A0A075B5G5 24892750
    256859 4p99:D (1.8) BS05 CA ? N/A A0A075B5G5 24892750
    256860 4p99:D (1.8) BS06 CA ? N/A A0A075B5G5 24892750
    256861 4p99:D (1.8) BS07 CA ? N/A A0A075B5G5 24892750
    256862 4p99:D (1.8) BS08 CA ? N/A A0A075B5G5 24892750
    256863 4p99:D (1.8) BS09 CA ? N/A A0A075B5G5 24892750
    256864 4p99:D (1.8) BS10 CA ? N/A A0A075B5G5 24892750
    256865 4p99:D (1.8) BS11 CA ? N/A A0A075B5G5 24892750
    256866 4p99:D (1.8) BS12 CA ? N/A A0A075B5G5 24892750
    256867 4p99:D (1.8) BS13 CA ? N/A A0A075B5G5 24892750
    256868 4p99:D (1.8) BS14 CA ? N/A A0A075B5G5 24892750
    256869 4p99:D (1.8) BS15 CA ? N/A A0A075B5G5 24892750
    256870 4p99:D (1.8) BS16 CA ? N/A A0A075B5G5 24892750
    256871 4p9c:A (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256872 4p9c:A (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256873 4p9c:A (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256874 4p9c:B (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256875 4p9c:B (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256876 4p9c:B (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256877 4p9c:C (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256878 4p9c:C (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256879 4p9c:C (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256880 4p9c:D (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256881 4p9c:D (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256882 4p9c:D (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256883 4p9c:E (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256884 4p9c:E (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256885 4p9c:E (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256886 4p9c:F (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256887 4p9c:F (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256888 4p9c:F (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256889 4p9c:G (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256890 4p9c:G (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256891 4p9c:G (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256892 4p9c:H (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256893 4p9c:H (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256894 4p9c:H (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256895 4p9c:I (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256896 4p9c:I (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256897 4p9c:I (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256898 4p9c:J (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256899 4p9c:J (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256900 4p9c:J (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256901 4p9c:K (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256902 4p9c:K (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256903 4p9c:K (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256904 4p9c:L (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256905 4p9c:L (2.6) BS02 DCM ? GO:0000166 ... H6WFU3 25404739
    256906 4p9c:L (2.6) BS03 DU ? GO:0000166 ... H6WFU3 25404739
    256907 4p9d:A (2.9) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256908 4p9d:A (2.9) BS02 TTP ? GO:0000166 ... H6WFU3 25404739
    256909 4p9d:A (2.9) BS03 TMP ? GO:0000166 ... H6WFU3 25404739
    256910 4p9d:B (2.9) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256911 4p9d:B (2.9) BS02 TMP ? GO:0000166 ... H6WFU3 25404739
    256912 4p9d:B (2.9) BS03 TTP ? GO:0000166 ... H6WFU3 25404739
    256913 4p9d:C (2.9) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256914 4p9d:C (2.9) BS02 TTP ? GO:0000166 ... H6WFU3 25404739
    256915 4p9d:C (2.9) BS03 TMP ? GO:0000166 ... H6WFU3 25404739
    256916 4p9d:D (2.9) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256917 4p9d:D (2.9) BS02 TTP ? GO:0000166 ... H6WFU3 25404739
    256918 4p9d:D (2.9) BS03 TMP ? GO:0000166 ... H6WFU3 25404739
    256919 4p9d:E (2.9) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256920 4p9d:E (2.9) BS02 TTP ? GO:0000166 ... H6WFU3 25404739
    256921 4p9d:E (2.9) BS03 TMP ? GO:0000166 ... H6WFU3 25404739
    256922 4p9d:F (2.9) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256923 4p9d:F (2.9) BS02 TTP ? GO:0000166 ... H6WFU3 25404739
    256924 4p9d:F (2.9) BS03 TMP ? GO:0000166 ... H6WFU3 25404739
    256925 4p9e:A (2.6) BS01 ZN ? GO:0000166 ... H6WFU3 25404739
    256926 4p9g:A (2.2) BS01 FE 1.13.11.41 GO:0047073 ... A0ACD6B9F3 25195757
    256927 4p9g:A (2.2) BS02 CO3 1.13.11.41 GO:0047073 ... A0ACD6B9F3 25195757
    256928 4p9h:H (3.0) BS01 BMA N/A N/A N/A 24767986
    256929 4p9h:H (3.0) BS02 MAN N/A N/A N/A 24767986
    256930 4p9h:H (3.0) BS03 MAN N/A N/A N/A 24767986
    256931 4p9h:H (3.0) BS04 MAN N/A N/A N/A 24767986
    256932 4p9k:A (1.4) BS01 EAX ? GO:0030288 ... A1WPV4 25540822
    256933 4p9o:A (2.89) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256934 4p9o:B (2.89) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256935 4p9o:B (2.89) BS02 2CV ? GO:0005216 ... A0L5S6 24850863
    256936 4p9o:C (2.89) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256937 4p9o:D (2.89) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256938 4p9p:B (2.91) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256939 4p9p:D (2.91) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256940 4p9s:A (2.32) BS01 FAD 1.5.8.4 GO:0005542 ... Q63342 24858690
    256941 4p9s:B (2.32) BS01 FAD 1.5.8.4 GO:0005542 ... Q63342 24858690
    256942 4p9u:A (3.208) BS01 dna ? GO:0000062 ... Q9KQU8 25607896
    256943 4p9u:A (3.208) BS02 dna ? GO:0000062 ... Q9KQU8 25607896
    256944 4p9u:B (3.208) BS01 dna ? GO:0000062 ... Q9KQU8 25607896
    256945 4p9u:B (3.208) BS02 dna ? GO:0000062 ... Q9KQU8 25607896
    256946 4p9u:E (3.208) BS01 dna ? GO:0000062 ... Q9KQU8 25607896
    256947 4p9u:E (3.208) BS02 dna ? GO:0000062 ... Q9KQU8 25607896
    256948 4p9u:F (3.208) BS01 dna ? GO:0000062 ... Q9KQU8 25607896
    256949 4p9u:F (3.208) BS02 dna ? GO:0000062 ... Q9KQU8 25607896
    256950 4p9v:A (1.64) BS01 peptide ? N/A P62993 24856058
    256951 4p9w:A (2.11) BS01 R3M ? GO:0030246 ... P02866 N/A
    256952 4p9w:A (2.11) BS02 MN ? GO:0030246 ... P02866 N/A
    256953 4p9w:A (2.11) BS03 CA ? GO:0030246 ... P02866 N/A
    256954 4p9w:B (2.11) BS01 R3M ? GO:0030246 ... P02866 N/A
    256955 4p9w:B (2.11) BS02 MN ? GO:0030246 ... P02866 N/A
    256956 4p9w:B (2.11) BS03 CA ? GO:0030246 ... P02866 N/A
    256957 4p9w:C (2.11) BS01 R3M ? GO:0030246 ... P02866 N/A
    256958 4p9w:C (2.11) BS02 MN ? GO:0030246 ... P02866 N/A
    256959 4p9w:C (2.11) BS03 CA ? GO:0030246 ... P02866 N/A
    256960 4p9w:D (2.11) BS01 R3M ? GO:0030246 ... P02866 N/A
    256961 4p9w:D (2.11) BS02 MN ? GO:0030246 ... P02866 N/A
    256962 4p9w:D (2.11) BS03 CA ? GO:0030246 ... P02866 N/A
    256963 4p9x:A (2.06) BS01 R3G ? GO:0030246 ... P02866 N/A
    256964 4p9x:A (2.06) BS02 MN ? GO:0030246 ... P02866 N/A
    256965 4p9x:A (2.06) BS03 CA ? GO:0030246 ... P02866 N/A
    256966 4p9x:B (2.06) BS01 R3G ? GO:0030246 ... P02866 N/A
    256967 4p9x:B (2.06) BS02 MN ? GO:0030246 ... P02866 N/A
    256968 4p9x:B (2.06) BS03 CA ? GO:0030246 ... P02866 N/A
    256969 4p9x:C (2.06) BS01 R3G ? GO:0030246 ... P02866 N/A
    256970 4p9x:C (2.06) BS02 MN ? GO:0030246 ... P02866 N/A
    256971 4p9x:C (2.06) BS03 CA ? GO:0030246 ... P02866 N/A
    256972 4p9x:D (2.06) BS01 R3G ? GO:0030246 ... P02866 N/A
    256973 4p9x:D (2.06) BS02 MN ? GO:0030246 ... P02866 N/A
    256974 4p9x:D (2.06) BS03 CA ? GO:0030246 ... P02866 N/A
    256975 4p9y:A (1.89) BS01 2KO ? GO:0030246 ... P02866 N/A
    256976 4p9y:A (1.89) BS02 MN ? GO:0030246 ... P02866 N/A
    256977 4p9y:A (1.89) BS03 CA ? GO:0030246 ... P02866 N/A
    256978 4p9y:B (1.89) BS01 2KO ? GO:0030246 ... P02866 N/A
    256979 4p9y:B (1.89) BS02 MN ? GO:0030246 ... P02866 N/A
    256980 4p9y:B (1.89) BS03 CA ? GO:0030246 ... P02866 N/A
    256981 4p9z:A (1.8) BS01 peptide ? N/A P62993 24856058
    256982 4pa0:A (2.25) BS01 2OW ? GO:0003774 ... P12883
    P42212
    26246073 MOAD: Ki=100nM
    256983 4pa0:B (2.25) BS01 2OW ? GO:0003774 ... P12883
    P42212
    26246073 MOAD: Ki=100nM
    256984 4pa3:A (3.25) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256985 4pa3:B (3.25) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256986 4pa3:B (3.25) BS02 2CV ? GO:0005216 ... A0L5S6 24850863
    256987 4pa3:C (3.25) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256988 4pa3:D (3.25) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256989 4pa3:D (3.25) BS02 2CV ? GO:0005216 ... A0L5S6 24850863
    256990 4pa4:A (3.02) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256991 4pa4:B (3.02) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256992 4pa4:C (3.02) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256993 4pa4:C (3.02) BS02 2CV ? GO:0005216 ... A0L5S6 24850863
    256994 4pa4:D (3.02) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256995 4pa5:A (1.86) BS01 DHL 2.3.2.13 GO:0003810 ... P40746 26322858
    256996 4pa6:A (3.36) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256997 4pa6:B (3.36) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256998 4pa6:B (3.36) BS02 2CV ? GO:0005216 ... A0L5S6 24850863
    256999 4pa6:C (3.36) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    257000 4pa6:D (3.36) BS01 2CV ? GO:0005216 ... A0L5S6 24850863

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).