SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    26001 1jvl:A (2.0) BS01 CU ? GO:0005507 ... P00282 11740504
    26002 1jvl:B (2.0) BS01 CU ? GO:0005507 ... P00282 11740504
    26003 1jvn:B (2.1) BS01 POP 3.5.1.2
    4.3.2.10
    GO:0000105 ... P33734 11591353
    26004 1jvo:A (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26005 1jvo:B (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26006 1jvo:C (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26007 1jvo:D (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26008 1jvo:E (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26009 1jvo:F (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26010 1jvo:G (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26011 1jvo:H (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26012 1jvo:I (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26013 1jvo:J (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26014 1jvo:K (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26015 1jvo:L (2.75) BS01 CU ? GO:0005507 ... P00282 11740504
    26016 1jvp:P (1.53) BS01 89E 2.7.11.22 GO:0000082 ... P24941 11755359
    26017 1jvq:I (2.6) BS01 peptide ? GO:0002020 ... P01008 15342247
    26018 1jvq:I (2.6) BS02 peptide ? GO:0002020 ... P01008 15342247
    26019 1jvs:A (2.2) BS01 SO4 1.1.1.267 GO:0008299 ... P45568 11872159
    26020 1jvs:A (2.2) BS02 NDP 1.1.1.267 GO:0008299 ... P45568 11872159
    26021 1jvs:B (2.2) BS01 SO4 1.1.1.267 GO:0008299 ... P45568 11872159
    26022 1jvs:B (2.2) BS02 NDP 1.1.1.267 GO:0008299 ... P45568 11872159
    26023 1jvu:A (1.78) BS01 C2P 4.6.1.18 GO:0003676 ... P61823 11746706 BindingDB: Ki=7000nM
    26024 1jvx:A (2.5) BS01 GLC ? GO:0008643 ... P0AEX9 12538909
    26025 1jvx:A (2.5) BS02 GLC ? GO:0008643 ... P0AEX9 12538909
    26026 1jvy:A (1.9) BS01 GLC ? GO:0008643 ... P0AEX9 12538909
    26027 1jvy:A (1.9) BS02 GLC ? GO:0008643 ... P0AEX9 12538909
    26028 1jvz:A (2.6) BS01 CEN 3.5.1.93 GO:0016787 ... Q9L5D6 11755403
    26029 1jvz:B (2.6) BS01 CEN 3.5.1.93 GO:0016787 ... Q9L5D6 11755403
    26030 1jw0:B (2.5) BS01 GUA 3.5.1.93 GO:0016787 ... Q9L5D6 11755403
    26031 1jw1:A (4.0) BS01 FE 3.4.21.- GO:0001817 ... Q29477 N/A
    26032 1jw1:A (4.0) BS02 FE 3.4.21.- GO:0001817 ... Q29477 N/A
    26033 1jw5:A (2.0) BS01 GLC ? GO:0005515 ... P0AEX9 11790091
    26034 1jw5:A (2.0) BS02 GLC ? GO:0005515 ... P0AEX9 11790091
    26035 1jw6:A (1.93) BS01 peptide ? GO:0030246 ... P02866 11732694
    26036 1jw6:A (1.93) BS02 MN ? GO:0030246 ... P02866 11732694
    26037 1jw6:A (1.93) BS03 CA ? GO:0030246 ... P02866 11732694
    26038 1jw8:A (1.3) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 17680690
    26039 1jw9:B (1.7) BS01 ZN 2.7.7.80 GO:0003824 ... P12282 11713534
    26040 1jwa:B (2.9) BS01 ATP 2.7.7.80 GO:0003824 ... P12282 11713534
    26041 1jwb:B (2.1) BS01 ZN 2.7.7.80 GO:0003824 ... P12282 11713534
    26042 1jwb:B (2.1) BS02 AMP 2.7.7.80 GO:0003824 ... P12282 11713534
    26043 1jwg:A (2.0) BS01 peptide ? GO:0005802 ... Q9UJY5 11859376
    26044 1jwg:B (2.0) BS01 peptide ? GO:0005802 ... Q9UJY5 11859376
    26045 1jwh:A (3.1) BS01 ANP 2.7.11.1 GO:0004672 ... P68400 11574463
    26046 1jwh:C (3.1) BS01 ZN ? GO:0000785 ... P67870 11574463
    26047 1jwh:D (3.1) BS01 ZN ? GO:0000785 ... P67870 11574463
    26048 1jwj:A (2.6) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 11669619
    26049 1jwj:A (2.6) BS02 H4B 1.14.13.39 GO:0004517 ... P29477 11669619
    26050 1jwj:B (2.6) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 11669619
    26051 1jwj:B (2.6) BS02 H4B 1.14.13.39 GO:0004517 ... P29477 11669619
    26052 1jwk:A (2.3) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 11669619
    26053 1jwk:A (2.3) BS02 HBI 1.14.13.39 GO:0004517 ... P29477 11669619
    26054 1jwk:B (2.3) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 11669619
    26055 1jwk:B (2.3) BS02 HBI 1.14.13.39 GO:0004517 ... P29477 11669619
    26056 1jwl:A (4.0) BS01 dna ? GO:0000976 ... P03023 11580238
    26057 1jwl:A (4.0) BS02 NPF ? GO:0000976 ... P03023 11580238
    26058 1jwl:B (4.0) BS01 dna ? GO:0000976 ... P03023 11580238
    26059 1jwl:B (4.0) BS02 dna ? GO:0000976 ... P03023 11580238
    26060 1jwl:B (4.0) BS03 NPF ? GO:0000976 ... P03023 11580238
    26061 1jwl:C (4.0) BS01 NPF ? GO:0000976 ... P03023 11580238
    26062 1jwm:A (2.7) BS01 peptide ? GO:0006955 ... P01903 12962633
    26063 1jwm:B (2.7) BS01 peptide ? GO:0006955 ... P01911 12962633
    26064 1jwn:A (2.1) BS01 HEM ? GO:0005737 ... P02213 11732898
    26065 1jwn:A (2.1) BS02 HEM ? GO:0005737 ... P02213 11732898
    26066 1jwn:B (2.1) BS01 HEM ? GO:0005737 ... P02213 11732898
    26067 1jwn:B (2.1) BS02 HEM ? GO:0005737 ... P02213 11732898
    26068 1jwn:C (2.1) BS01 HEM ? GO:0005737 ... P02213 11732898
    26069 1jwn:C (2.1) BS02 HEM ? GO:0005737 ... P02213 11732898
    26070 1jwn:D (2.1) BS01 HEM ? GO:0005737 ... P02213 11732898
    26071 1jwn:D (2.1) BS02 HEM ? GO:0005737 ... P02213 11732898
    26072 1jwq:A (1.8) BS01 ZN 3.5.1.28 GO:0008745 ... Q9LCR3 N/A
    26073 1jws:A (2.6) BS01 peptide ? GO:0006955 ... P01903 12962633
    26074 1jws:B (2.6) BS01 peptide ? GO:0006955 ... P01911 12962633
    26075 1jwt:A (2.5) BS01 BLI 3.4.21.5 GO:0004252 ... P00734 11720865 MOAD: Ki=14nM
    26076 1jwu:A (2.3) BS01 peptide ? GO:0006955 ... P01903 12962633
    26077 1jwu:B (2.3) BS01 peptide ? GO:0006955 ... P01911 12962633
    26078 1jwv:A (1.85) BS01 CB4 3.5.2.6 GO:0005515 ... P62593 12079336
    26079 1jwy:A (2.3) BS01 BGC ? GO:0003774 ... P08799
    Q94464
    11689422
    26080 1jwy:A (2.3) BS02 MG ? GO:0003774 ... P08799
    Q94464
    11689422
    26081 1jwy:A (2.3) BS03 ADP ? GO:0003774 ... P08799
    Q94464
    11689422
    26082 1jwy:A (2.3) BS04 GDP ? GO:0003774 ... P08799
    Q94464
    11689422
    26083 1jwz:A (1.8) BS01 105 3.5.2.6 GO:0005515 ... P62593 12079336
    26084 1jx0:A (2.85) BS01 DFV 5.5.1.6 GO:0009813 ... P28012 11955065
    26085 1jx1:C (2.3) BS01 DFV 5.5.1.6 GO:0009813 ... P28012 11955065
    26086 1jx2:A (2.3) BS01 BGC ? GO:0003774 ... P08799
    Q94464
    11689422
    26087 1jx2:A (2.3) BS02 MG ? GO:0003774 ... P08799
    Q94464
    11689422
    26088 1jx2:A (2.3) BS03 ADP ? GO:0003774 ... P08799
    Q94464
    11689422
    26089 1jx4:A (1.7) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26090 1jx4:A (1.7) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26091 1jx4:A (1.7) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26092 1jx4:A (1.7) BS04 MG 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26093 1jx4:A (1.7) BS05 ADI 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26094 1jx6:A (1.5) BS01 AI2 ? GO:0000976 ... P54300 11823863
    26095 1jx9:B (2.28) BS01 CA 3.5.1.11 GO:0016787 ... P06875 15254299
    26096 1jxa:A (3.1) BS01 G6Q 2.6.1.16 GO:0004360 ... P17169 11700065
    26097 1jxa:B (3.1) BS01 G6Q 2.6.1.16 GO:0004360 ... P17169 11700065
    26098 1jxd:A (-1.00) BS01 CU ? GO:0005507 ... P21697 11509552
    26099 1jxf:A (-1.00) BS01 CU ? GO:0005507 ... P21697 11509552
    26100 1jxg:A (1.6) BS01 CU1 ? GO:0005507 ... P00299 11679761
    26101 1jxg:B (1.6) BS01 CU1 ? GO:0005507 ... P00299 11679761
    26102 1jxi:A (2.64) BS01 HMH 2.7.1.49
    2.7.4.7
    GO:0003824 ... P55882 11839308
    26103 1jxi:B (2.64) BS01 HMH 2.7.1.49
    2.7.4.7
    GO:0003824 ... P55882 11839308
    26104 1jxj:A (1.99) BS01 CA 3.2.1.1 GO:0003824 ... P0DUB6 15182367
    26105 1jxk:A (1.9) BS01 CA 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    26106 1jxl:A (2.1) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26107 1jxl:A (2.1) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26108 1jxl:A (2.1) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26109 1jxl:A (2.1) BS04 MG 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26110 1jxl:A (2.1) BS05 MG 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26111 1jxl:A (2.1) BS06 MG 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26112 1jxl:A (2.1) BS07 DG3 2.7.7.7 GO:0000287 ... Q97W02 11595188
    26113 1jxm:A (2.0) BS01 5GP ? N/A P31016 11779506
    26114 1jxn:A (2.3) BS01 MFU ? GO:0030246 ... P22972 N/A
    26115 1jxn:A (2.3) BS02 MN ? GO:0030246 ... P22972 N/A
    26116 1jxn:A (2.3) BS03 CA ? GO:0030246 ... P22972 N/A
    26117 1jxn:B (2.3) BS01 MFU ? GO:0030246 ... P22972 N/A
    26118 1jxn:B (2.3) BS02 MN ? GO:0030246 ... P22972 N/A
    26119 1jxn:B (2.3) BS03 CA ? GO:0030246 ... P22972 N/A
    26120 1jxn:C (2.3) BS01 MFU ? GO:0030246 ... P22972 N/A
    26121 1jxn:C (2.3) BS02 MN ? GO:0030246 ... P22972 N/A
    26122 1jxn:C (2.3) BS03 CA ? GO:0030246 ... P22972 N/A
    26123 1jxn:D (2.3) BS01 MFU ? GO:0030246 ... P22972 N/A
    26124 1jxn:D (2.3) BS02 MN ? GO:0030246 ... P22972 N/A
    26125 1jxn:D (2.3) BS03 CA ? GO:0030246 ... P22972 N/A
    26126 1jxp:A (2.2) BS01 peptide 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26663 9568891
    26127 1jxp:A (2.2) BS02 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26663 9568891
    26128 1jxp:B (2.2) BS01 peptide 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26663 9568891
    26129 1jxp:B (2.2) BS02 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26663 9568891
    26130 1jxq:A (2.8) BS01 peptide 3.4.22.62 GO:0004197 ... P55211 11734640
    26131 1jxq:C (2.8) BS01 peptide 3.4.22.62 GO:0004197 ... P55211 11734640
    26132 1jxz:A (1.9) BS01 CA 3.8.1.7 GO:0003824 ... A5JTM5 11695894
    26133 1jxz:A (1.9) BS02 BCA 3.8.1.7 GO:0003824 ... A5JTM5 11695894
    26134 1jxz:A (1.9) BS03 BCA 3.8.1.7 GO:0003824 ... A5JTM5 11695894
    26135 1jxz:B (1.9) BS01 BCA 3.8.1.7 GO:0003824 ... A5JTM5 11695894
    26136 1jxz:B (1.9) BS02 CA 3.8.1.7 GO:0003824 ... A5JTM5 11695894
    26137 1jxz:B (1.9) BS03 BCA 3.8.1.7 GO:0003824 ... A5JTM5 11695894
    26138 1jxz:C (1.9) BS01 CA 3.8.1.7 GO:0003824 ... A5JTM5 11695894
    26139 1jxz:C (1.9) BS02 BCA 3.8.1.7 GO:0003824 ... A5JTM5 11695894
    26140 1jy7:A (3.2) BS01 HEM ? GO:0004601 ... P69905 12077435
    26141 1jy7:B (3.2) BS01 HEM ? GO:0004601 ... P68871 12077435
    26142 1jy7:C (3.2) BS01 HEM ? GO:0004601 ... P69905 12077435
    26143 1jy7:D (3.2) BS01 HEM ? GO:0004601 ... P68871 12077435
    26144 1jy7:P (3.2) BS01 HEM ? GO:0004601 ... P69905 12077435
    26145 1jy7:Q (3.2) BS01 HEM ? GO:0004601 ... P68871 12077435
    26146 1jy7:R (3.2) BS01 HEM ? GO:0004601 ... P69905 12077435
    26147 1jy7:S (3.2) BS01 HEM ? GO:0004601 ... P68871 12077435
    26148 1jy7:U (3.2) BS01 HEM ? GO:0004601 ... P69905 12077435
    26149 1jy7:V (3.2) BS01 HEM ? GO:0004601 ... P68871 12077435
    26150 1jy7:W (3.2) BS01 HEM ? GO:0004601 ... P69905 12077435
    26151 1jy7:X (3.2) BS01 HEM ? GO:0004601 ... P68871 12077435
    26152 1jy8:A (2.5) BS01 ZN 4.6.1.12 GO:0005515 ... P62617 11829504
    26153 1jy8:A (2.5) BS02 C5P 4.6.1.12 GO:0005515 ... P62617 11829504
    26154 1jy8:A (2.5) BS03 CDI 4.6.1.12 GO:0005515 ... P62617 11829504
    26155 1jyb:A (2.2) BS01 FE ? GO:0005506 ... P24931 12459910
    26156 1jyb:A (2.2) BS02 FE ? GO:0005506 ... P24931 12459910
    26157 1jyb:A (2.2) BS03 ZN ? GO:0005506 ... P24931 12459910
    26158 1jyc:A (2.75) BS01 peptide ? GO:0030246 ... P55915 11371463
    26159 1jyc:A (2.75) BS02 MN ? GO:0030246 ... P55915 11371463
    26160 1jyc:A (2.75) BS03 CA ? GO:0030246 ... P55915 11371463
    26161 1jyc:B (2.75) BS01 peptide ? GO:0030246 ... P55915 11371463
    26162 1jyc:B (2.75) BS02 MN ? GO:0030246 ... P55915 11371463
    26163 1jyc:B (2.75) BS03 CA ? GO:0030246 ... P55915 11371463
    26164 1jyc:C (2.75) BS01 peptide ? GO:0030246 ... P55915 11371463
    26165 1jyc:C (2.75) BS02 MN ? GO:0030246 ... P55915 11371463
    26166 1jyc:C (2.75) BS03 CA ? GO:0030246 ... P55915 11371463
    26167 1jyc:D (2.75) BS01 peptide ? GO:0030246 ... P55915 11371463
    26168 1jyc:D (2.75) BS02 MN ? GO:0030246 ... P55915 11371463
    26169 1jyc:D (2.75) BS03 CA ? GO:0030246 ... P55915 11371463
    26170 1jyi:A (2.75) BS01 peptide ? GO:0030246 ... P55915 10821862
    26171 1jyi:A (2.75) BS02 MN ? GO:0030246 ... P55915 10821862
    26172 1jyi:A (2.75) BS03 CA ? GO:0030246 ... P55915 10821862
    26173 1jyi:B (2.75) BS01 peptide ? GO:0030246 ... P55915 10821862
    26174 1jyi:B (2.75) BS02 MN ? GO:0030246 ... P55915 10821862
    26175 1jyi:B (2.75) BS03 CA ? GO:0030246 ... P55915 10821862
    26176 1jyi:C (2.75) BS01 peptide ? GO:0030246 ... P55915 10821862
    26177 1jyi:C (2.75) BS02 MN ? GO:0030246 ... P55915 10821862
    26178 1jyi:C (2.75) BS03 CA ? GO:0030246 ... P55915 10821862
    26179 1jyi:D (2.75) BS01 peptide ? GO:0030246 ... P55915 10821862
    26180 1jyi:D (2.75) BS02 MN ? GO:0030246 ... P55915 10821862
    26181 1jyi:D (2.75) BS03 CA ? GO:0030246 ... P55915 10821862
    26182 1jyl:A (2.4) BS01 MG 2.7.7.15 GO:0004105 ... Q8DPI6 11706035
    26183 1jyl:A (2.4) BS02 CDC 2.7.7.15 GO:0004105 ... Q8DPI6 11706035
    26184 1jyl:B (2.4) BS01 MG 2.7.7.15 GO:0004105 ... Q8DPI6 11706035
    26185 1jyl:B (2.4) BS02 CDC 2.7.7.15 GO:0004105 ... Q8DPI6 11706035
    26186 1jyl:C (2.4) BS01 MG 2.7.7.15 GO:0004105 ... Q8DPI6 11706035
    26187 1jyl:C (2.4) BS02 CDC 2.7.7.15 GO:0004105 ... Q8DPI6 11706035
    26188 1jyl:C (2.4) BS03 CDC 2.7.7.15 GO:0004105 ... Q8DPI6 11706035
    26189 1jyl:D (2.4) BS01 MG 2.7.7.15 GO:0004105 ... Q8DPI6 11706035
    26190 1jyl:D (2.4) BS02 CDC 2.7.7.15 GO:0004105 ... Q8DPI6 11706035
    26191 1jym:A (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 12005434
    26192 1jym:B (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 12005434
    26193 1jym:C (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 12005434
    26194 1jym:D (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 12005434
    26195 1jym:E (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 12005434
    26196 1jym:F (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 12005434
    26197 1jym:G (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 12005434
    26198 1jym:H (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 12005434
    26199 1jym:I (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 12005434
    26200 1jym:J (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 12005434

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).