SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    264601 4r9s:E (3.2) BS02 3KY 1.3.1.9 GO:0004318 ... P9WGR1 25568071 BindingDB: IC50=570nM
    264602 4r9s:G (3.2) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 25568071
    264603 4r9s:G (3.2) BS02 3KY 1.3.1.9 GO:0004318 ... P9WGR1 25568071 BindingDB: IC50=570nM
    264604 4r9t:A (2.25) BS01 CA ? N/A Q15485 25447524
    264605 4r9t:B (2.25) BS01 CA ? N/A Q15485 25447524
    264606 4r9t:B (2.25) BS02 SO4 ? N/A Q15485 25447524
    264607 4r9t:C (2.25) BS01 CA ? N/A Q15485 25447524
    264608 4r9t:C (2.25) BS02 SO4 ? N/A Q15485 25447524
    264609 4r9u:C (2.785) BS01 ANP 7.6.2.8 GO:0005515 ... P06611 25402482
    264610 4r9u:C (2.785) BS02 MG 7.6.2.8 GO:0005515 ... P06611 25402482
    264611 4r9u:C (2.785) BS03 ANP 7.6.2.8 GO:0005515 ... P06611 25402482
    264612 4r9u:D (2.785) BS01 ANP 7.6.2.8 GO:0005515 ... P06611 25402482
    264613 4r9u:D (2.785) BS02 ANP 7.6.2.8 GO:0005515 ... P06611 25402482
    264614 4r9u:D (2.785) BS03 MG 7.6.2.8 GO:0005515 ... P06611 25402482
    264615 4r9v:A (2.3) BS01 CA ? N/A O66375 25451227
    264616 4r9v:A (2.3) BS02 CA ? N/A O66375 25451227
    264617 4r9w:B (2.5) BS01 IDS ? GO:0002548 ... P02776 26391892
    264618 4r9x:A (1.8515) BS01 CA ? GO:0003674 ... A0A6L8Q3J2 N/A
    264619 4r9x:A (1.8515) BS02 CA ? GO:0003674 ... A0A6L8Q3J2 N/A
    264620 4r9x:B (1.8515) BS01 CA ? GO:0003674 ... A0A6L8Q3J2 N/A
    264621 4ra0:A (3.07) BS01 CA ? N/A Q14393 25242553
    264622 4ra0:B (3.07) BS01 CA ? N/A Q14393 25242553
    264623 4ra1:A (1.75) BS01 ALX ? GO:0015833 ... Q52012 26244338 MOAD: Kd=0.43uM
    264624 4ra1:A (1.75) BS02 BNX ? GO:0015833 ... Q52012 26244338 MOAD: Kd=0.43uM
    264625 4ra2:A (1.94) BS01 MN 3.1.3.16 GO:0000122 ... P35813 N/A
    264626 4ra2:A (1.94) BS02 MN 3.1.3.16 GO:0000122 ... P35813 N/A
    264627 4ra3:A (2.8) BS01 TFX ? GO:0000139 ... P61769 26420657
    264628 4ra3:B (2.8) BS01 TFX ? GO:0000139 ... P61769 26420657
    264629 4ra3:B (2.8) BS02 TFX ? GO:0000139 ... P61769 26420657
    264630 4ra3:C (2.8) BS01 TFX ? GO:0000139 ... P61769 26420657
    264631 4ra4:A (2.63) BS01 3KZ 2.7.11.13 GO:0004672 ... P17252 25254961
    264632 4ra5:A (2.61) BS01 3L0 2.7.11.13 GO:0004672 ... Q04759 25254961 BindingDB: IC50=4.0nM
    264633 4ra5:B (2.61) BS01 3L0 2.7.11.13 GO:0004672 ... Q04759 25254961 BindingDB: IC50=4.0nM
    264634 4ra7:A (1.94) BS01 NXU 2.4.1.129 GO:0008658 ... C8W8H7 N/A
    264635 4ra7:B (1.94) BS01 NXU 2.4.1.129 GO:0008658 ... C8W8H7 N/A
    264636 4rab:A (2.264) BS01 3L3 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=0.04uM
    264637 4rab:A (2.264) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264638 4rab:A (2.264) BS03 PO4 2.4.2.8 GO:0000287 ... P00492 25494538
    264639 4rab:B (2.264) BS01 3L3 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=0.04uM
    264640 4rab:B (2.264) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264641 4rab:C (2.264) BS01 3L3 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=0.04uM
    264642 4rab:C (2.264) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264643 4rab:C (2.264) BS03 PO4 2.4.2.8 GO:0000287 ... P00492 25494538
    264644 4rab:D (2.264) BS01 3L3 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=0.04uM
    264645 4rab:D (2.264) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264646 4rab:D (2.264) BS03 PO4 2.4.2.8 GO:0000287 ... P00492 25494538
    264647 4rac:A (2.05) BS01 3L4 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=0.03uM
    264648 4rac:A (2.05) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264649 4rac:B (2.05) BS01 3L4 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=0.03uM
    264650 4rac:B (2.05) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264651 4rac:C (2.05) BS01 3L4 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=0.03uM
    264652 4rac:C (2.05) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264653 4rac:D (2.05) BS01 3L4 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=0.03uM
    264654 4rac:D (2.05) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264655 4rad:A (2.0) BS01 3L5 2.4.2.8 GO:0000287 ... P00492 25494538
    264656 4rad:A (2.0) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264657 4rad:B (2.0) BS01 3L5 2.4.2.8 GO:0000287 ... P00492 25494538
    264658 4rad:B (2.0) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264659 4rad:C (2.0) BS01 3L5 2.4.2.8 GO:0000287 ... P00492 25494538
    264660 4rad:C (2.0) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264661 4rad:D (2.0) BS01 3L5 2.4.2.8 GO:0000287 ... P00492 25494538
    264662 4rad:D (2.0) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264663 4rad:E (2.0) BS01 3L5 2.4.2.8 GO:0000287 ... P00492 25494538
    264664 4rad:F (2.0) BS01 3L5 2.4.2.8 GO:0000287 ... P00492 25494538
    264665 4rad:F (2.0) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264666 4rad:G (2.0) BS01 3L5 2.4.2.8 GO:0000287 ... P00492 25494538
    264667 4rad:G (2.0) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264668 4rad:H (2.0) BS01 3L5 2.4.2.8 GO:0000287 ... P00492 25494538
    264669 4rad:H (2.0) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264670 4raf:A (2.001) BS01 MN 3.1.3.16 GO:0000122 ... P35813 25708299
    264671 4rag:A (1.85) BS01 MN 3.1.3.16 GO:0000122 ... P35813 25708299
    264672 4rak:A (2.04) BS01 652 ? GO:0003677 ... P55055 25435151 MOAD: Ki=14nM
    BindingDB: EC50=250nM, Ki=14nM
    264673 4rak:B (2.04) BS01 652 ? GO:0003677 ... P55055 25435151 MOAD: Ki=14nM
    BindingDB: EC50=250nM, Ki=14nM
    264674 4ral:A (3.148) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 25636406
    264675 4ral:A (3.148) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 25636406
    264676 4ral:B (3.148) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 25636406
    264677 4ral:B (3.148) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 25636406
    264678 4ram:A (1.495) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    264679 4ram:A (1.495) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    264680 4ram:A (1.495) BS03 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    264681 4ram:A (1.495) BS04 PNM 3.5.2.6 GO:0008270 ... C7C422 N/A
    264682 4ram:B (1.495) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    264683 4ram:B (1.495) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    264684 4ram:B (1.495) BS03 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    264685 4ram:B (1.495) BS04 PNM 3.5.2.6 GO:0008270 ... C7C422 N/A
    264686 4ran:A (2.549) BS01 3L6 2.4.2.8 GO:0000287 ... P00492 25494538
    264687 4ran:A (2.549) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264688 4ran:B (2.549) BS01 3L6 2.4.2.8 GO:0000287 ... P00492 25494538
    264689 4ran:B (2.549) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264690 4ran:C (2.549) BS01 3L6 2.4.2.8 GO:0000287 ... P00492 25494538
    264691 4ran:C (2.549) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264692 4ran:D (2.549) BS01 3L6 2.4.2.8 GO:0000287 ... P00492 25494538
    264693 4ran:D (2.549) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264694 4rao:A (1.871) BS01 3L7 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=1uM
    264695 4rao:A (1.871) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264696 4rao:B (1.871) BS01 3L7 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=1uM
    264697 4rao:B (1.871) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264698 4rao:C (1.871) BS01 3L7 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=1uM
    264699 4rao:C (1.871) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264700 4rao:D (1.871) BS01 3L7 2.4.2.8 GO:0000287 ... P00492 25494538 MOAD: Ki=1uM
    264701 4rao:D (1.871) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264702 4rap:A (2.881) BS01 FE 2.4.99.- GO:0016757 ... Q9S4K6 25310236
    264703 4rap:D (2.881) BS01 FE 2.4.99.- GO:0016757 ... Q9S4K6 25310236
    264704 4rap:E (2.881) BS01 FE 2.4.99.- GO:0016757 ... Q9S4K6 25310236
    264705 4rap:G (2.881) BS01 FE 2.4.99.- GO:0016757 ... Q9S4K6 25310236
    264706 4rap:K (2.881) BS01 FE 2.4.99.- GO:0016757 ... Q9S4K6 25310236
    264707 4raq:A (2.53) BS01 3L8 2.4.2.8 GO:0000287 ... P00492 25494538
    264708 4raq:A (2.53) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264709 4raq:B (2.53) BS01 3L8 2.4.2.8 GO:0000287 ... P00492 25494538
    264710 4raq:B (2.53) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264711 4raq:C (2.53) BS01 3L8 2.4.2.8 GO:0000287 ... P00492 25494538
    264712 4raq:C (2.53) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264713 4raq:D (2.53) BS01 3L8 2.4.2.8 GO:0000287 ... P00492 25494538
    264714 4raq:D (2.53) BS02 MG 2.4.2.8 GO:0000287 ... P00492 25494538
    264715 4ras:A (2.3) BS01 SF4 ? N/A K2MB66 25327251
    264716 4ras:A (2.3) BS02 SF4 ? N/A K2MB66 25327251
    264717 4ras:A (2.3) BS03 B12 ? N/A K2MB66 25327251
    264718 4ras:B (2.3) BS01 SF4 ? N/A K2MB66 25327251
    264719 4ras:B (2.3) BS02 SF4 ? N/A K2MB66 25327251
    264720 4ras:B (2.3) BS03 B12 ? N/A K2MB66 25327251
    264721 4ras:C (2.3) BS01 SF4 ? N/A K2MB66 25327251
    264722 4ras:C (2.3) BS02 SF4 ? N/A K2MB66 25327251
    264723 4ras:C (2.3) BS03 B12 ? N/A K2MB66 25327251
    264724 4rav:A (2.5) BS01 peptide N/A N/A N/A 25861763
    264725 4rav:B (2.5) BS01 peptide N/A N/A N/A 25861763
    264726 4rav:B (2.5) BS02 peptide N/A N/A N/A 25861763
    264727 4rav:C (2.5) BS01 peptide N/A N/A N/A 25861763
    264728 4rav:D (2.5) BS01 peptide N/A N/A N/A 25861763
    264729 4rav:D (2.5) BS02 peptide N/A N/A N/A 25861763
    264730 4raw:A (1.302) BS01 ZZ7 3.5.2.6 GO:0008270 ... C7C422 N/A
    264731 4raw:B (1.302) BS01 ZZ7 3.5.2.6 GO:0008270 ... C7C422 N/A
    264732 4raz:A (1.9) BS01 MN ? GO:0000976 ... V6F4Q0 26134419
    264733 4raz:A (1.9) BS02 MN ? GO:0000976 ... V6F4Q0 26134419
    264734 4raz:B (1.9) BS01 MN ? GO:0000976 ... V6F4Q0 26134419
    264735 4raz:B (1.9) BS02 MN ? GO:0000976 ... V6F4Q0 26134419
    264736 4rb1:A (2.75) BS01 dna ? GO:0000976 ... V6F4Q0 26134419
    264737 4rb1:A (2.75) BS02 MN ? GO:0000976 ... V6F4Q0 26134419
    264738 4rb1:A (2.75) BS03 MN ? GO:0000976 ... V6F4Q0 26134419
    264739 4rb1:B (2.75) BS01 dna ? GO:0000976 ... V6F4Q0 26134419
    264740 4rb1:B (2.75) BS02 MN ? GO:0000976 ... V6F4Q0 26134419
    264741 4rb1:B (2.75) BS03 MN ? GO:0000976 ... V6F4Q0 26134419
    264742 4rb2:C (2.82) BS01 dna ? GO:0000976 ... V6F4Q0 26134419
    264743 4rb2:C (2.82) BS02 dna ? GO:0000976 ... V6F4Q0 26134419
    264744 4rb2:C (2.82) BS03 MN ? GO:0000976 ... V6F4Q0 26134419
    264745 4rb2:C (2.82) BS04 MN ? GO:0000976 ... V6F4Q0 26134419
    264746 4rb2:D (2.82) BS01 dna ? GO:0000976 ... V6F4Q0 26134419
    264747 4rb2:D (2.82) BS02 dna ? GO:0000976 ... V6F4Q0 26134419
    264748 4rb2:D (2.82) BS03 MN ? GO:0000976 ... V6F4Q0 26134419
    264749 4rb2:D (2.82) BS04 MN ? GO:0000976 ... V6F4Q0 26134419
    264750 4rb3:C (2.6) BS01 dna ? GO:0000976 ... V6F4Q0 26134419
    264751 4rb3:C (2.6) BS02 dna ? GO:0000976 ... V6F4Q0 26134419
    264752 4rb3:C (2.6) BS03 MN ? GO:0000976 ... V6F4Q0 26134419
    264753 4rb3:C (2.6) BS04 MN ? GO:0000976 ... V6F4Q0 26134419
    264754 4rb3:D (2.6) BS01 dna ? GO:0000976 ... V6F4Q0 26134419
    264755 4rb3:D (2.6) BS02 dna ? GO:0000976 ... V6F4Q0 26134419
    264756 4rb3:D (2.6) BS03 MN ? GO:0000976 ... V6F4Q0 26134419
    264757 4rb3:D (2.6) BS04 MN ? GO:0000976 ... V6F4Q0 26134419
    264758 4rb4:A (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264759 4rb4:A (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264760 4rb4:B (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264761 4rb4:B (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264762 4rb4:C (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264763 4rb4:C (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264764 4rb4:D (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264765 4rb4:D (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264766 4rb4:E (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264767 4rb4:E (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264768 4rb4:F (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264769 4rb4:F (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264770 4rb4:G (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264771 4rb4:G (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264772 4rb4:H (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264773 4rb4:H (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264774 4rb4:I (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264775 4rb4:I (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264776 4rb4:J (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264777 4rb4:J (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264778 4rb4:K (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264779 4rb4:K (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264780 4rb4:L (3.88) BS01 FE N/A GO:0016757 ... N/A 25310236
    264781 4rb4:L (3.88) BS02 AQH N/A GO:0016757 ... N/A 25310236
    264782 4rbl:A (2.55) BS01 3O7 2.7.11.1 GO:0004672 ... P11309 N/A
    264783 4rbm:A (1.75) BS01 CA 3.4.22.47 GO:0006508 ... Q51817 25266723
    264784 4rbm:A (1.75) BS02 CA 3.4.22.47 GO:0006508 ... Q51817 25266723
    264785 4rbm:A (1.75) BS03 HIS 3.4.22.47 GO:0006508 ... Q51817 25266723
    264786 4rbm:A (1.75) BS04 AZI 3.4.22.47 GO:0006508 ... Q51817 25266723
    264787 4rbm:A (1.75) BS05 AZI 3.4.22.47 GO:0006508 ... Q51817 25266723
    264788 4rbm:A (1.75) BS06 CKC 3.4.22.47 GO:0006508 ... Q51817 25266723
    264789 4rbo:A (3.3) BS01 dna ? GO:0000981 ... Q9H9S0 25825768
    264790 4rbo:A (3.3) BS02 dna ? GO:0000981 ... Q9H9S0 25825768
    264791 4rbo:D (3.3) BS01 dna ? GO:0000981 ... Q9H9S0 25825768
    264792 4rbo:D (3.3) BS02 dna ? GO:0000981 ... Q9H9S0 25825768
    264793 4rbp:H (1.85) BS01 MAN N/A N/A N/A 25380763
    264794 4rbp:H (1.85) BS02 MAN N/A N/A N/A 25380763
    264795 4rbp:M (1.85) BS01 MAN N/A N/A N/A 25380763
    264796 4rbp:M (1.85) BS02 MAN N/A N/A N/A 25380763
    264797 4rbs:A (2.405) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    264798 4rbs:A (2.405) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    264799 4rbs:A (2.405) BS03 0RV 3.5.2.6 GO:0008270 ... C7C422 N/A
    264800 4rbs:A (2.405) BS04 0RV 3.5.2.6 GO:0008270 ... C7C422 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).