SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    26401 1jz7:C (1.5) BS03 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26402 1jz7:C (1.5) BS04 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26403 1jz7:D (1.5) BS01 GAL 3.2.1.23 GO:0000287 ... P00722 11732897 MOAD: Ki~400mM
    26404 1jz7:D (1.5) BS02 GAL 3.2.1.23 GO:0000287 ... P00722 11732897 MOAD: Ki~400mM
    26405 1jz7:D (1.5) BS03 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26406 1jz7:D (1.5) BS04 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26407 1jz8:A (1.5) BS01 GAL 3.2.1.23 GO:0000287 ... P00722 11732897
    26408 1jz8:A (1.5) BS02 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26409 1jz8:A (1.5) BS03 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26410 1jz8:B (1.5) BS01 GAL 3.2.1.23 GO:0000287 ... P00722 11732897
    26411 1jz8:B (1.5) BS02 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26412 1jz8:B (1.5) BS03 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26413 1jz8:C (1.5) BS01 GAL 3.2.1.23 GO:0000287 ... P00722 11732897
    26414 1jz8:C (1.5) BS02 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26415 1jz8:C (1.5) BS03 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26416 1jz8:D (1.5) BS01 GAL 3.2.1.23 GO:0000287 ... P00722 11732897
    26417 1jz8:D (1.5) BS02 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26418 1jz8:D (1.5) BS03 MG 3.2.1.23 GO:0000287 ... P00722 11732897
    26419 1jze:A (1.6) BS01 CU ? GO:0005507 ... P00282 11716717
    26420 1jze:A (1.6) BS02 DRU ? GO:0005507 ... P00282 11716717
    26421 1jze:A (1.6) BS03 LRU ? GO:0005507 ... P00282 11716717
    26422 1jzf:A (1.5) BS01 CU ? GO:0005507 ... P00282 11716717
    26423 1jzf:A (1.5) BS02 RTB ? GO:0005507 ... P00282 11716717
    26424 1jzf:A (1.5) BS03 IME ? GO:0005507 ... P00282 11716717
    26425 1jzg:A (1.4) BS01 CU1 ? GO:0005507 ... P00282 11716717
    26426 1jzg:A (1.4) BS02 RTB ? GO:0005507 ... P00282 11716717
    26427 1jzg:A (1.4) BS03 IMF ? GO:0005507 ... P00282 11716717
    26428 1jzh:A (1.7) BS01 CU ? GO:0005507 ... P00282 11716717
    26429 1jzh:A (1.7) BS02 RTA ? GO:0005507 ... P00282 11716717
    26430 1jzi:A (1.62) BS01 CU ? GO:0005507 ... P00282 11716717
    26431 1jzi:A (1.62) BS02 REP ? GO:0005507 ... P00282 11716717
    26432 1jzi:A (1.62) BS03 IME ? GO:0005507 ... P00282 11716717
    26433 1jzi:B (1.62) BS01 CU ? GO:0005507 ... P00282 11716717
    26434 1jzi:B (1.62) BS02 REP ? GO:0005507 ... P00282 11716717
    26435 1jzj:A (1.8) BS01 CU ? GO:0005507 ... P00282 11716717
    26436 1jzj:A (1.8) BS02 DOS ? GO:0005507 ... P00282 11716717
    26437 1jzj:A (1.8) BS03 IME ? GO:0005507 ... P00282 11716717
    26438 1jzj:B (1.8) BS01 CU ? GO:0005507 ... P00282 11716717
    26439 1jzj:B (1.8) BS02 DOS ? GO:0005507 ... P00282 11716717
    26440 1jzj:B (1.8) BS03 LOS ? GO:0005507 ... P00282 11716717
    26441 1jzk:A (2.2) BS01 HEM ? GO:0005737 ... P02213 11732898
    26442 1jzk:A (2.2) BS02 HEM ? GO:0005737 ... P02213 11732898
    26443 1jzk:B (2.2) BS01 HEM ? GO:0005737 ... P02213 11732898
    26444 1jzk:C (2.2) BS01 HEM ? GO:0005737 ... P02213 11732898
    26445 1jzk:C (2.2) BS02 HEM ? GO:0005737 ... P02213 11732898
    26446 1jzk:D (2.2) BS01 HEM ? GO:0005737 ... P02213 11732898
    26447 1jzk:D (2.2) BS02 HEM ? GO:0005737 ... P02213 11732898
    26448 1jzl:A (1.5) BS01 HEM ? GO:0005737 ... P02213 11732898
    26449 1jzl:A (1.5) BS02 HEM ? GO:0005737 ... P02213 11732898
    26450 1jzl:B (1.5) BS01 HEM ? GO:0005737 ... P02213 11732898
    26451 1jzl:B (1.5) BS02 HEM ? GO:0005737 ... P02213 11732898
    26452 1jzm:A (1.9) BS01 HEM ? GO:0005737 ... P02213 11732898
    26453 1jzm:A (1.9) BS02 HEM ? GO:0005737 ... P02213 11732898
    26454 1jzm:B (1.9) BS01 HEM ? GO:0005737 ... P02213 11732898
    26455 1jzm:B (1.9) BS02 HEM ? GO:0005737 ... P02213 11732898
    26456 1jzn:A (2.2) BS01 GAL ? GO:0005576 ... P21963 15049685
    26457 1jzn:A (2.2) BS02 CA ? GO:0005576 ... P21963 15049685
    26458 1jzn:B (2.2) BS01 GAL ? GO:0005576 ... P21963 15049685
    26459 1jzn:B (2.2) BS02 CA ? GO:0005576 ... P21963 15049685
    26460 1jzn:C (2.2) BS01 GAL ? GO:0005576 ... P21963 15049685
    26461 1jzn:C (2.2) BS02 CA ? GO:0005576 ... P21963 15049685
    26462 1jzn:D (2.2) BS01 GAL ? GO:0005576 ... P21963 15049685
    26463 1jzn:D (2.2) BS02 CA ? GO:0005576 ... P21963 15049685
    26464 1jzn:E (2.2) BS01 GAL ? GO:0005576 ... P21963 15049685
    26465 1jzn:E (2.2) BS02 CA ? GO:0005576 ... P21963 15049685
    26466 1jzq:A (3.0) BS01 ZN 6.1.1.5 GO:0000049 ... P56690 11584022
    26467 1jzq:A (3.0) BS02 ZN 6.1.1.5 GO:0000049 ... P56690 11584022
    26468 1jzq:A (3.0) BS03 ILA 6.1.1.5 GO:0000049 ... P56690 11584022
    26469 1jzr:A (2.9) BS01 GSH 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26470 1jzr:C (2.9) BS01 GSH 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26471 1jzs:A (2.5) BS01 ZN 6.1.1.5 GO:0000049 ... P56690 11584022
    26472 1jzs:A (2.5) BS02 ZN 6.1.1.5 GO:0000049 ... P56690 11584022
    26473 1jzs:A (2.5) BS03 MRC 6.1.1.5 GO:0000049 ... P56690 11584022 MOAD: Ki=0.25uM
    26474 1jzw:A (1.76) BS01 SO4 1.20.4.1 GO:0008794 ... P08692 11709171
    26475 1jzw:A (1.76) BS02 SO3 1.20.4.1 GO:0008794 ... P08692 11709171
    26476 1jzx:K (3.1) BS01 rna ? GO:0003735 ... Q9RXK1 11677599
    26477 1jzx:L (3.1) BS01 rna ? GO:0003735 ... Q9RXJ7 11677599
    26478 1jzx:M (3.1) BS01 rna ? GO:0003735 ... P49228 11677599
    26479 1jzy:K (3.5) BS01 rna ? GO:0003735 ... Q9RXK1 11677599
    26480 1jzy:L (3.5) BS01 rna ? GO:0003735 ... Q9RXJ7 11677599
    26481 1jzy:M (3.5) BS01 rna ? GO:0003735 ... P49228 11677599
    26482 1jzz:K (3.8) BS01 rna ? GO:0003735 ... Q9RXK1 11677599
    26483 1jzz:L (3.8) BS01 rna ? GO:0003735 ... Q9RXJ7 11677599
    26484 1jzz:M (3.8) BS01 rna ? GO:0003735 ... P49228 11677599
    26485 1k01:K (3.5) BS01 rna ? GO:0003735 ... Q9RXK1 11677599
    26486 1k01:L (3.5) BS01 rna ? GO:0003735 ... Q9RXJ7 11677599
    26487 1k01:M (3.5) BS01 rna ? GO:0003735 ... P49228 11677599
    26488 1k02:A (2.7) BS01 FMN 1.6.99.1 GO:0003959 ... Q02899 11668181
    26489 1k03:A (2.7) BS01 FMN 1.6.99.1 GO:0003959 ... Q02899 11668181
    26490 1k03:A (2.7) BS02 HBA 1.6.99.1 GO:0003959 ... Q02899 11668181
    26491 1k06:A (1.8) BS01 BZD 2.4.1.1 GO:0004645 ... P00489 11895439 MOAD: Ki=4.6uM
    BindingDB: Ki=4600nM
    26492 1k06:A (1.8) BS02 BZD 2.4.1.1 GO:0004645 ... P00489 11895439 MOAD: Ki=4.6uM
    BindingDB: Ki=4600nM
    26493 1k06:A (1.8) BS03 PLP 2.4.1.1 GO:0004645 ... P00489 11895439
    26494 1k07:A () BS01 ZN 3.5.2.6 N/A N/A N/A
    26495 1k07:A () BS02 ZN 3.5.2.6 N/A N/A N/A
    26496 1k07:B () BS01 ZN 3.5.2.6 N/A N/A N/A
    26497 1k07:B () BS02 ZN 3.5.2.6 N/A N/A N/A
    26498 1k08:A (2.26) BS01 BZD 2.4.1.1 GO:0004645 ... P00489 11895439 MOAD: Ki=4.6uM
    BindingDB: Ki=4600nM
    26499 1k08:A (2.26) BS02 BZD 2.4.1.1 GO:0004645 ... P00489 11895439 MOAD: Ki=4.6uM
    BindingDB: Ki=4600nM
    26500 1k08:A (2.26) BS03 PLP 2.4.1.1 GO:0004645 ... P00489 11895439
    26501 1k0a:A (2.5) BS01 GTX 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26502 1k0a:B (2.5) BS01 GSH 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26503 1k0b:A (2.5) BS01 GSH 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26504 1k0b:C (2.5) BS01 GSH 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26505 1k0c:A (2.5) BS01 GTB 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26506 1k0c:B (2.5) BS01 GTB 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26507 1k0c:C (2.5) BS01 GTB 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26508 1k0c:D (2.5) BS01 GSH 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26509 1k0d:A (2.2) BS01 GSH 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26510 1k0d:B (2.2) BS01 GSH 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26511 1k0d:C (2.2) BS01 GSH 1.11.1.9
    1.8.4.-
    GO:0003714 ... P23202 11695904
    26512 1k0e:A (2.0) BS01 TRP 2.6.1.85 GO:0000162 ... P05041 11841211
    26513 1k0e:B (2.0) BS01 TRP 2.6.1.85 GO:0000162 ... P05041 11841211
    26514 1k0g:A (2.05) BS01 PO4 2.6.1.85 GO:0000162 ... P05041 11841211
    26515 1k0g:A (2.05) BS02 TRP 2.6.1.85 GO:0000162 ... P05041 11841211
    26516 1k0g:B (2.05) BS01 PO4 2.6.1.85 GO:0000162 ... P05041 11841211
    26517 1k0g:B (2.05) BS02 TRP 2.6.1.85 GO:0000162 ... P05041 11841211
    26518 1k0i:A (1.8) BS01 FAD 1.14.13.2 GO:0016491 ... P20586 11805318
    26519 1k0j:A (2.2) BS01 FAD 1.14.13.2 GO:0016491 ... P20586 11805318
    26520 1k0j:A (2.2) BS02 NDP 1.14.13.2 GO:0016491 ... P20586 11805318 MOAD: Ki=1.1mM
    26521 1k0l:A (2.0) BS01 SO3 1.14.13.2 GO:0016491 ... P20586 11805318
    26522 1k0l:A (2.0) BS02 FAD 1.14.13.2 GO:0016491 ... P20586 11805318
    26523 1k0n:A (1.8) BS01 GSH ? GO:0005254 ... O00299 11551966
    26524 1k0t:A (-1.00) BS01 SF4 1.97.1.12 GO:0009055 ... P31087 11941504
    26525 1k0t:A (-1.00) BS02 SF4 1.97.1.12 GO:0009055 ... P31087 11941504
    26526 1k0u:A (3.0) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26527 1k0u:A (3.0) BS02 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    26528 1k0u:A (3.0) BS03 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26529 1k0u:B (3.0) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26530 1k0u:B (3.0) BS02 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26531 1k0u:B (3.0) BS03 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    26532 1k0u:C (3.0) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26533 1k0u:C (3.0) BS02 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    26534 1k0u:C (3.0) BS03 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26535 1k0u:D (3.0) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26536 1k0u:D (3.0) BS02 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26537 1k0u:D (3.0) BS03 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    26538 1k0u:E (3.0) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26539 1k0u:E (3.0) BS02 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    26540 1k0u:E (3.0) BS03 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26541 1k0u:F (3.0) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26542 1k0u:F (3.0) BS02 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26543 1k0u:F (3.0) BS03 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    26544 1k0u:G (3.0) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26545 1k0u:G (3.0) BS02 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    26546 1k0u:G (3.0) BS03 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26547 1k0u:H (3.0) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26548 1k0u:H (3.0) BS02 NAD 3.13.2.1 GO:0001666 ... P10760 11741948
    26549 1k0u:H (3.0) BS03 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    26550 1k0v:A (-1.00) BS01 CU1 ? GO:0005507 ... O32221 11747441
    26551 1k0w:A (2.1) BS01 ZN 5.1.3.4 GO:0005829 ... P08203 11732895
    26552 1k0w:B (2.1) BS01 ZN 5.1.3.4 GO:0005829 ... P08203 11732895
    26553 1k0w:C (2.1) BS01 ZN 5.1.3.4 GO:0005829 ... P08203 11732895
    26554 1k0w:D (2.1) BS01 ZN 5.1.3.4 GO:0005829 ... P08203 11732895
    26555 1k0w:E (2.1) BS01 ZN 5.1.3.4 GO:0005829 ... P08203 11732895
    26556 1k0w:F (2.1) BS01 ZN 5.1.3.4 GO:0005829 ... P08203 11732895
    26557 1k0y:A (1.87) BS01 HEM ? GO:0004601 ... P69905 11914488
    26558 1k0y:A (1.87) BS02 CNO ? GO:0004601 ... P69905 11914488
    26559 1k0y:A (1.87) BS03 CNO ? GO:0004601 ... P69905 11914488
    26560 1k0y:B (1.87) BS01 HEM ? GO:0004601 ... P68871 11914488
    26561 1k0y:B (1.87) BS02 CNO ? GO:0004601 ... P68871 11914488
    26562 1k0y:C (1.87) BS01 HEM ? GO:0004601 ... P69905 11914488
    26563 1k0y:C (1.87) BS02 CNO ? GO:0004601 ... P69905 11914488
    26564 1k0y:C (1.87) BS03 CNO ? GO:0004601 ... P69905 11914488
    26565 1k0y:D (1.87) BS01 HEM ? GO:0004601 ... P68871 11914488
    26566 1k0y:D (1.87) BS02 CNO ? GO:0004601 ... P68871 11914488
    26567 1k0y:D (1.87) BS03 CNO ? GO:0004601 ... P68871 11914488
    26568 1k12:A (1.9) BS01 FUC ? GO:0001868 ... Q7SIC1 12091873
    26569 1k12:A (1.9) BS02 CA ? GO:0001868 ... Q7SIC1 12091873
    26570 1k1d:A (3.01) BS01 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26571 1k1d:A (3.01) BS02 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26572 1k1d:B (3.01) BS01 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26573 1k1d:B (3.01) BS02 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26574 1k1d:C (3.01) BS01 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26575 1k1d:C (3.01) BS02 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26576 1k1d:D (3.01) BS01 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26577 1k1d:D (3.01) BS02 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26578 1k1d:E (3.01) BS01 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26579 1k1d:E (3.01) BS02 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26580 1k1d:F (3.01) BS01 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26581 1k1d:F (3.01) BS02 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26582 1k1d:G (3.01) BS01 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26583 1k1d:G (3.01) BS02 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26584 1k1d:H (3.01) BS01 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26585 1k1d:H (3.01) BS02 ZN 3.5.2.- GO:0005737 ... Q45515 12135362
    26586 1k1e:A (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26587 1k1e:B (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26588 1k1e:C (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26589 1k1e:D (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26590 1k1e:E (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26591 1k1e:F (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26592 1k1e:G (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26593 1k1e:H (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26594 1k1e:I (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26595 1k1e:J (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26596 1k1e:K (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26597 1k1e:L (1.67) BS01 CO 3.1.3.45 GO:0016788 ... P45314 11835514
    26598 1k1g:A (-1.00) BS01 rna ? GO:0003676 ... Q15637 11691992
    26599 1k1i:A (2.2) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11676542
    26600 1k1i:A (2.2) BS02 FD1 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=264nM
    BindingDB: Ki=99999999999999nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).