SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    29201 1kx5:H (1.94) BS02 dna ? GO:0000786 ... P02281 12079350
    29202 1kx7:A (-1.00) BS01 HEC ? GO:0005506 ... O52685 11955059
    29203 1kxg:A (2.0) BS01 MG ? GO:0005164 ... Q9Y275 11862220
    29204 1kxg:F (2.0) BS01 MG ? GO:0005164 ... Q9Y275 11862220
    29205 1kxh:A (2.3) BS01 GLC 3.2.1.1 GO:0003824 ... P29957 11914073
    29206 1kxh:A (2.3) BS02 GLC 3.2.1.1 GO:0003824 ... P29957 11914073
    29207 1kxh:A (2.3) BS03 AC1 3.2.1.1 GO:0003824 ... P29957 11914073
    29208 1kxh:A (2.3) BS04 CA 3.2.1.1 GO:0003824 ... P29957 11914073
    29209 1kxm:A (1.74) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 11967381
    29210 1kxm:A (1.74) BS02 BZI 1.11.1.5 GO:0004601 ... P00431 11967381 MOAD: Kd=0.14mM
    29211 1kxn:A (1.8) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 11967381
    29212 1kxp:A (2.1) BS01 ATP 3.6.4.- GO:0000287 ... P68135 12048248
    29213 1kxq:A (1.6) BS01 CA 3.2.1.1 GO:0003824 ... P00690 11960990
    29214 1kxq:B (1.6) BS01 CA 3.2.1.1 GO:0003824 ... P00690 11960990
    29215 1kxq:C (1.6) BS01 CA 3.2.1.1 GO:0003824 ... P00690 11960990
    29216 1kxq:D (1.6) BS01 CA 3.2.1.1 GO:0003824 ... P00690 11960990
    29217 1kxr:A (2.07) BS01 CA 3.4.22.52 GO:0004198 ... P97571 11893336
    29218 1kxr:A (2.07) BS02 CA 3.4.22.52 GO:0004198 ... P97571 11893336
    29219 1kxr:B (2.07) BS01 CA 3.4.22.52 GO:0004198 ... P97571 11893336
    29220 1kxr:B (2.07) BS02 CA 3.4.22.52 GO:0004198 ... P97571 11893336
    29221 1kxt:A (2.0) BS01 CA 3.2.1.1 GO:0003824 ... P00690 11960990
    29222 1kxt:C (2.0) BS01 CA 3.2.1.1 GO:0003824 ... P00690 11960990
    29223 1kxt:E (2.0) BS01 CA 3.2.1.1 GO:0003824 ... P00690 11960990
    29224 1ky2:A (1.6) BS01 MG ? GO:0003924 ... P32939 11937061
    29225 1ky2:A (1.6) BS02 GNP ? GO:0003924 ... P32939 11937061
    29226 1ky3:A (1.35) BS01 GDP ? GO:0003924 ... P32939 11937061
    29227 1ky4:A (2.8) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11927587
    29228 1ky4:A (2.8) BS02 NAD 3.13.2.1 GO:0001666 ... P10760 11927587
    29229 1ky4:B (2.8) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11927587
    29230 1ky4:B (2.8) BS02 NAD 3.13.2.1 GO:0001666 ... P10760 11927587
    29231 1ky4:C (2.8) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11927587
    29232 1ky4:C (2.8) BS02 NAD 3.13.2.1 GO:0001666 ... P10760 11927587
    29233 1ky4:D (2.8) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 11927587
    29234 1ky4:D (2.8) BS02 NAD 3.13.2.1 GO:0001666 ... P10760 11927587
    29235 1ky5:A (2.8) BS01 NAI 3.13.2.1 GO:0001666 ... P10760 11927587
    29236 1ky5:A (2.8) BS02 ADY 3.13.2.1 GO:0001666 ... P10760 11927587
    29237 1ky5:A (2.8) BS03 NAI 3.13.2.1 GO:0001666 ... P10760 11927587
    29238 1ky5:B (2.8) BS01 NAI 3.13.2.1 GO:0001666 ... P10760 11927587
    29239 1ky5:B (2.8) BS02 NAI 3.13.2.1 GO:0001666 ... P10760 11927587
    29240 1ky5:B (2.8) BS03 ADY 3.13.2.1 GO:0001666 ... P10760 11927587
    29241 1ky5:C (2.8) BS01 NAI 3.13.2.1 GO:0001666 ... P10760 11927587
    29242 1ky5:C (2.8) BS02 ADY 3.13.2.1 GO:0001666 ... P10760 11927587
    29243 1ky5:C (2.8) BS03 NAI 3.13.2.1 GO:0001666 ... P10760 11927587
    29244 1ky5:D (2.8) BS01 NAI 3.13.2.1 GO:0001666 ... P10760 11927587
    29245 1ky5:D (2.8) BS02 NAI 3.13.2.1 GO:0001666 ... P10760 11927587
    29246 1ky5:D (2.8) BS03 ADY 3.13.2.1 GO:0001666 ... P10760 11927587
    29247 1ky6:A (2.0) BS01 peptide ? GO:0006886 ... P17427 12057195
    29248 1ky7:A (2.15) BS01 peptide ? GO:0006886 ... P17427 12057195
    29249 1ky8:A (2.4) BS01 NAP 1.2.1.90 GO:0008886 ... O57693 11842090 MOAD: Kd=1uM
    29250 1kya:A (2.4) BS01 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29251 1kya:A (2.4) BS02 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29252 1kya:A (2.4) BS03 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29253 1kya:A (2.4) BS04 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29254 1kya:A (2.4) BS05 XYD 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29255 1kya:B (2.4) BS01 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29256 1kya:B (2.4) BS02 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29257 1kya:B (2.4) BS03 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29258 1kya:B (2.4) BS04 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29259 1kya:B (2.4) BS05 XYD 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29260 1kya:C (2.4) BS01 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29261 1kya:C (2.4) BS02 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29262 1kya:C (2.4) BS03 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29263 1kya:C (2.4) BS04 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29264 1kya:C (2.4) BS05 XYD 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29265 1kya:D (2.4) BS01 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29266 1kya:D (2.4) BS02 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29267 1kya:D (2.4) BS03 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29268 1kya:D (2.4) BS04 CU 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29269 1kya:D (2.4) BS05 XYD 1.10.3.2 GO:0005507 ... Q96UT7 12044164
    29270 1kyd:A (2.0) BS01 peptide ? GO:0006886 ... P17427 12057195
    29271 1kyf:A (1.22) BS01 peptide ? GO:0006886 ... P17427 12057195
    29272 1kyi:A (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29273 1kyi:B (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29274 1kyi:C (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29275 1kyi:D (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29276 1kyi:E (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29277 1kyi:F (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29278 1kyi:G (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29279 1kyi:H (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29280 1kyi:I (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29281 1kyi:J (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29282 1kyi:K (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29283 1kyi:L (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29284 1kyi:M (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29285 1kyi:N (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29286 1kyi:O (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29287 1kyi:P (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29288 1kyi:Q (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29289 1kyi:R (3.1) BS01 LVS 3.4.25.2 GO:0004298 ... P43772 12054822
    29290 1kyi:S (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29291 1kyi:T (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29292 1kyi:U (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29293 1kyi:V (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29294 1kyi:W (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29295 1kyi:X (3.1) BS01 ATP ? GO:0005515 ... P43773 12054822
    29296 1kyn:A (3.5) BS01 KTP 3.4.21.20 GO:0002003 ... P08311 11942800 BindingDB: IC50=4100nM
    29297 1kyn:B (3.5) BS01 KTP 3.4.21.20 GO:0002003 ... P08311 11942800 BindingDB: IC50=4100nM
    29298 1kyo:C (2.97) BS01 HEC 7.1.1.8 GO:0005739 ... P00163 11880631
    29299 1kyo:C (2.97) BS02 HEC 7.1.1.8 GO:0005739 ... P00163 11880631
    29300 1kyo:C (2.97) BS03 SMA 7.1.1.8 GO:0005739 ... P00163 11880631
    29301 1kyo:D (2.97) BS01 HEC 7.1.1.8 GO:0009055 ... P07143 11880631
    29302 1kyo:E (2.97) BS01 FES 7.1.1.8 GO:0008121 ... P08067 11880631
    29303 1kyo:E (2.97) BS02 SMA 7.1.1.8 GO:0008121 ... P08067 11880631
    29304 1kyo:N (2.97) BS01 HEC 7.1.1.8 GO:0005739 ... P00163 11880631
    29305 1kyo:N (2.97) BS02 HEC 7.1.1.8 GO:0005739 ... P00163 11880631
    29306 1kyo:N (2.97) BS03 SMA 7.1.1.8 GO:0005739 ... P00163 11880631
    29307 1kyo:O (2.97) BS01 HEC 7.1.1.8 GO:0009055 ... P07143 11880631
    29308 1kyo:P (2.97) BS01 FES 7.1.1.8 GO:0008121 ... P08067 11880631
    29309 1kyo:W (2.97) BS01 HEC ? GO:0005515 ... P00044 11880631
    29310 1kyq:A (2.2) BS01 NAD 1.3.1.76
    4.99.1.4
    GO:0000103 ... P15807 11980703
    29311 1kyq:B (2.2) BS01 NAD 1.3.1.76
    4.99.1.4
    GO:0000103 ... P15807 11980703
    29312 1kyq:C (2.2) BS01 NAD 1.3.1.76
    4.99.1.4
    GO:0000103 ... P15807 11980703
    29313 1kyr:A (1.5) BS01 CU ? GO:0006091 ... P42212 11929238
    29314 1kys:A (1.44) BS01 ZN ? GO:0006091 ... P42212 11929238
    29315 1kyt:A (1.7) BS01 CA 3.1.3.18 GO:0000287 ... Q9HLQ2 N/A
    29316 1kyt:A (1.7) BS02 CA 3.1.3.18 GO:0000287 ... Q9HLQ2 N/A
    29317 1kyt:A (1.7) BS03 CA 3.1.3.18 GO:0000287 ... Q9HLQ2 N/A
    29318 1kyt:B (1.7) BS01 CA 3.1.3.18 GO:0000287 ... Q9HLQ2 N/A
    29319 1kyt:B (1.7) BS02 CA 3.1.3.18 GO:0000287 ... Q9HLQ2 N/A
    29320 1kyu:A (1.8) BS01 peptide ? GO:0006886 ... P17427 12057195
    29321 1kyv:A (2.4) BS01 RBF 2.5.1.78 GO:0000906 ... Q9UUB1 12083520 MOAD: Kd=1.2uM
    29322 1kyv:A (2.4) BS02 RBF 2.5.1.78 GO:0000906 ... Q9UUB1 12083520 MOAD: Kd=1.2uM
    29323 1kyv:B (2.4) BS01 RBF 2.5.1.78 GO:0000906 ... Q9UUB1 12083520 MOAD: Kd=1.2uM
    29324 1kyv:B (2.4) BS02 RBF 2.5.1.78 GO:0000906 ... Q9UUB1 12083520 MOAD: Kd=1.2uM
    29325 1kyv:C (2.4) BS01 RBF 2.5.1.78 GO:0000906 ... Q9UUB1 12083520 MOAD: Kd=1.2uM
    29326 1kyv:C (2.4) BS02 RBF 2.5.1.78 GO:0000906 ... Q9UUB1 12083520 MOAD: Kd=1.2uM
    29327 1kyv:D (2.4) BS01 RBF 2.5.1.78 GO:0000906 ... Q9UUB1 12083520 MOAD: Kd=1.2uM
    29328 1kyv:D (2.4) BS02 RBF 2.5.1.78 GO:0000906 ... Q9UUB1 12083520 MOAD: Kd=1.2uM
    29329 1kyv:E (2.4) BS01 RBF 2.5.1.78 GO:0000906 ... Q9UUB1 12083520 MOAD: Kd=1.2uM
    29330 1kyv:E (2.4) BS02 RBF 2.5.1.78 GO:0000906 ... Q9UUB1 12083520 MOAD: Kd=1.2uM
    29331 1kyw:C (2.4) BS01 SAH 2.1.1.68 GO:0008168 ... P28002 12084826
    29332 1kyw:F (2.4) BS01 SAH 2.1.1.68 GO:0008168 ... P28002 12084826
    29333 1kyw:F (2.4) BS02 HFL 2.1.1.68 GO:0008168 ... P28002 12084826
    29334 1kyx:A (2.6) BS01 CRM 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29335 1kyx:A (2.6) BS02 CRM 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29336 1kyx:B (2.6) BS01 CRM 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29337 1kyx:B (2.6) BS02 CRM 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29338 1kyx:C (2.6) BS01 CRM 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29339 1kyx:C (2.6) BS02 CRM 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29340 1kyx:D (2.6) BS01 CRM 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29341 1kyx:D (2.6) BS02 CRM 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29342 1kyx:E (2.6) BS01 CRM 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29343 1kyx:E (2.6) BS02 CRM 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29344 1kyy:A (2.4) BS01 INI 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29345 1kyy:A (2.4) BS02 INI 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29346 1kyy:B (2.4) BS01 INI 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29347 1kyy:B (2.4) BS02 INI 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29348 1kyy:C (2.4) BS01 INI 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29349 1kyy:C (2.4) BS02 INI 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29350 1kyy:D (2.4) BS01 INI 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29351 1kyy:D (2.4) BS02 INI 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29352 1kyy:E (2.4) BS01 INI 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29353 1kyy:E (2.4) BS02 INI 2.5.1.78 GO:0000906 ... Q9UUB1 12083520
    29354 1kyz:A (2.2) BS01 FER 2.1.1.68 GO:0008168 ... P28002 12084826
    29355 1kyz:A (2.2) BS02 SAH 2.1.1.68 GO:0008168 ... P28002 12084826
    29356 1kyz:C (2.2) BS01 FER 2.1.1.68 GO:0008168 ... P28002 12084826
    29357 1kyz:C (2.2) BS02 SAH 2.1.1.68 GO:0008168 ... P28002 12084826
    29358 1kyz:E (2.2) BS01 SAH 2.1.1.68 GO:0008168 ... P28002 12084826
    29359 1kyz:E (2.2) BS02 FER 2.1.1.68 GO:0008168 ... P28002 12084826
    29360 1kz8:A (2.0) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 12190310
    29361 1kz8:A (2.0) BS02 MN 3.1.3.11 GO:0000122 ... P00636 12190310
    29362 1kz8:A (2.0) BS03 AMP 3.1.3.11 GO:0000122 ... P00636 12190310 BindingDB: IC50=1300nM
    29363 1kz8:A (2.0) BS04 PFE 3.1.3.11 GO:0000122 ... P00636 12190310 MOAD: ic50=0.83uM
    29364 1kz8:F (2.0) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 12190310
    29365 1kz8:F (2.0) BS02 MN 3.1.3.11 GO:0000122 ... P00636 12190310
    29366 1kz8:F (2.0) BS03 AMP 3.1.3.11 GO:0000122 ... P00636 12190310 BindingDB: IC50=1300nM
    29367 1kz8:F (2.0) BS04 PFE 3.1.3.11 GO:0000122 ... P00636 12190310 MOAD: ic50=0.83uM
    29368 1kza:1 (1.74) BS01 MAN ? N/A P08661 11850428
    29369 1kza:1 (1.74) BS02 CA ? N/A P08661 11850428
    29370 1kza:1 (1.74) BS03 CA ? N/A P08661 11850428
    29371 1kza:2 (1.74) BS01 MAN ? N/A P08661 11850428
    29372 1kza:2 (1.74) BS02 CA ? N/A P08661 11850428
    29373 1kza:2 (1.74) BS03 CA ? N/A P08661 11850428
    29374 1kzb:1 (1.8) BS01 MAN ? N/A P08661 11850428
    29375 1kzb:1 (1.8) BS02 CA ? N/A P08661 11850428
    29376 1kzb:1 (1.8) BS03 CA ? N/A P08661 11850428
    29377 1kzb:2 (1.8) BS01 MAN ? N/A P08661 11850428
    29378 1kzb:2 (1.8) BS02 CA ? N/A P08661 11850428
    29379 1kzb:2 (1.8) BS03 CA ? N/A P08661 11850428
    29380 1kzc:1 (1.85) BS01 MAN ? N/A P08661 11850428
    29381 1kzc:1 (1.85) BS02 CA ? N/A P08661 11850428
    29382 1kzc:1 (1.85) BS03 CA ? N/A P08661 11850428
    29383 1kzc:2 (1.85) BS01 MAN ? N/A P08661 11850428
    29384 1kzc:2 (1.85) BS02 CA ? N/A P08661 11850428
    29385 1kzc:2 (1.85) BS03 CA ? N/A P08661 11850428
    29386 1kzd:1 (1.9) BS01 CA ? N/A P08661 11850428
    29387 1kzd:1 (1.9) BS02 CA ? N/A P08661 11850428
    29388 1kzd:2 (1.9) BS01 CA ? N/A P08661 11850428
    29389 1kzd:2 (1.9) BS02 CA ? N/A P08661 11850428
    29390 1kze:1 (1.8) BS01 MAN ? N/A P08661 11850428
    29391 1kze:1 (1.8) BS02 CA ? N/A P08661 11850428
    29392 1kze:1 (1.8) BS03 CA ? N/A P08661 11850428
    29393 1kze:2 (1.8) BS01 MAN ? N/A P08661 11850428
    29394 1kze:2 (1.8) BS02 CA ? N/A P08661 11850428
    29395 1kze:2 (1.8) BS03 CA ? N/A P08661 11850428
    29396 1kzh:A (2.55) BS01 SO4 2.7.1.90 GO:0003872 ... P70826 12015149
    29397 1kzh:A (2.55) BS02 SO4 2.7.1.90 GO:0003872 ... P70826 12015149
    29398 1kzh:A (2.55) BS03 SO4 2.7.1.90 GO:0003872 ... P70826 12015149
    29399 1kzh:B (2.55) BS01 SO4 2.7.1.90 GO:0003872 ... P70826 12015149
    29400 1kzh:B (2.55) BS02 SO4 2.7.1.90 GO:0003872 ... P70826 12015149

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).