SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    30201 1lc3:A (1.5) BS05 NAD 1.3.1.24 GO:0000166 ... P46844 12079357
    30202 1lc5:A (1.46) BS01 PO4 4.1.1.81 GO:0003824 ... P97084 12119022
    30203 1lc5:A (1.46) BS02 PO4 4.1.1.81 GO:0003824 ... P97084 12119022
    30204 1lc7:A (1.8) BS01 PO4 4.1.1.81 GO:0003824 ... P97084 12119022
    30205 1lc7:A (1.8) BS02 TPO 4.1.1.81 GO:0003824 ... P97084 12119022
    30206 1lc8:A (1.8) BS01 33P 4.1.1.81 GO:0003824 ... P97084 12119022
    30207 1lca:A (2.5) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 8371269
    30208 1lcb:A (2.5) BS01 TMP 2.1.1.45 GO:0004799 ... P00469 8371269
    30209 1lcb:A (2.5) BS02 DHF 2.1.1.45 GO:0004799 ... P00469 8371269
    30210 1lcc:A (-1.00) BS01 dna ? GO:0003677 ... P03023 8230225
    30211 1lcc:A (-1.00) BS02 dna ? GO:0003677 ... P03023 8230225
    30212 1lcd:A (-1.00) BS01 dna ? GO:0003677 ... P03023 8230225
    30213 1lcd:A (-1.00) BS02 dna ? GO:0003677 ... P03023 8230225
    30214 1lce:A (2.5) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 8371269
    30215 1lce:A (2.5) BS02 TMF 2.1.1.45 GO:0004799 ... P00469 8371269
    30216 1lcf:A (2.0) BS01 CU 3.4.21.- GO:0001530 ... P02788 15299444
    30217 1lcf:A (2.0) BS02 CU 3.4.21.- GO:0001530 ... P02788 15299444
    30218 1lcf:A (2.0) BS03 CO3 3.4.21.- GO:0001530 ... P02788 15299444
    30219 1lcf:A (2.0) BS04 OXL 3.4.21.- GO:0001530 ... P02788 15299444
    30220 1lcj:A (1.8) BS01 peptide 2.7.10.2 N/A P06239 7680435
    30221 1lck:A (2.5) BS01 peptide 2.7.10.2 N/A P06239 7512222
    30222 1lcn:A (1.63) BS01 SCN 3.2.1.17 GO:0003796 ... P00698 11418760
    30223 1lcn:B (1.63) BS01 SCN 3.2.1.17 GO:0003796 ... P00698 11418760
    30224 1lcn:B (1.63) BS02 SCN 3.2.1.17 GO:0003796 ... P00698 11418760
    30225 1lco:A (2.9) BS01 HEM 1.1.2.3 GO:0016491 ... P00175 7632684
    30226 1lco:A (2.9) BS02 FMN 1.1.2.3 GO:0016491 ... P00175 7632684
    30227 1lco:A (2.9) BS03 PPY 1.1.2.3 GO:0016491 ... P00175 7632684
    30228 1lco:B (2.9) BS01 FMN 1.1.2.3 GO:0016491 ... P00175 7632684
    30229 1lco:B (2.9) BS02 PPY 1.1.2.3 GO:0016491 ... P00175 7632684
    30230 1lcp:A (1.65) BS01 ZN 3.4.11.1
    3.4.11.5
    3.4.13.23
    GO:0004177 ... P00727 7619821
    30231 1lcp:A (1.65) BS02 ZN 3.4.11.1
    3.4.11.5
    3.4.13.23
    GO:0004177 ... P00727 7619821
    30232 1lcp:A (1.65) BS03 PLU 3.4.11.1
    3.4.11.5
    3.4.13.23
    GO:0004177 ... P00727 7619821 MOAD: Ki=0.23uM
    30233 1lcp:B (1.65) BS01 ZN 3.4.11.1
    3.4.11.5
    3.4.13.23
    GO:0004177 ... P00727 7619821
    30234 1lcp:B (1.65) BS02 ZN 3.4.11.1
    3.4.11.5
    3.4.13.23
    GO:0004177 ... P00727 7619821
    30235 1lcp:B (1.65) BS03 PLU 3.4.11.1
    3.4.11.5
    3.4.13.23
    GO:0004177 ... P00727 7619821 MOAD: Ki=0.23uM
    30236 1lct:A (2.0) BS01 FE 3.4.21.- GO:0005576 ... P02788 8371268
    30237 1lct:A (2.0) BS02 CO3 3.4.21.- GO:0005576 ... P02788 8371268
    30238 1lcu:A (3.5) BS01 CA 3.6.4.- GO:0000287 ... P68135 11932258
    30239 1lcu:A (3.5) BS02 CA 3.6.4.- GO:0000287 ... P68135 11932258
    30240 1lcu:A (3.5) BS03 ATP 3.6.4.- GO:0000287 ... P68135 11932258
    30241 1lcu:A (3.5) BS04 LAR 3.6.4.- GO:0000287 ... P68135 11932258
    30242 1lcu:B (3.5) BS01 ATP 3.6.4.- GO:0000287 ... P68135 11932258
    30243 1lcu:B (3.5) BS02 LAR 3.6.4.- GO:0000287 ... P68135 11932258
    30244 1lcv:A (2.3) BS01 SNR ? GO:0009374 ... P22629 12055191
    30245 1lcv:B (2.3) BS01 SNR ? GO:0009374 ... P22629 12055191
    30246 1lcw:A (2.2) BS01 SHM ? GO:0009374 ... P22629 12055191
    30247 1lcw:B (2.2) BS01 SHM ? GO:0009374 ... P22629 12055191
    30248 1lcz:A (1.95) BS01 BH7 ? GO:0009374 ... P22629 12055191
    30249 1lcz:B (1.95) BS01 BH7 ? GO:0009374 ... P22629 12055191
    30250 1ld3:A (2.6) BS01 ZN 4.99.1.9 GO:0004325 ... P32396 12761666
    30251 1ld7:A (2.0) BS01 GLC 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 12036349
    30252 1ld7:A (2.0) BS02 FPP 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 12036349 BindingDB: Kd=2.0nM
    30253 1ld7:B (2.0) BS01 GLC 2.5.1.58 GO:0003824 ... P49356 12036349
    30254 1ld7:B (2.0) BS02 FRU 2.5.1.58 GO:0003824 ... P49356 12036349
    30255 1ld7:B (2.0) BS03 ZN 2.5.1.58 GO:0003824 ... P49356 12036349
    30256 1ld7:B (2.0) BS04 FPP 2.5.1.58 GO:0003824 ... P49356 12036349
    30257 1ld7:B (2.0) BS05 U66 2.5.1.58 GO:0003824 ... P49356 12036349 MOAD: ic50=1.1nM
    30258 1ld8:A (1.8) BS01 GLC 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 12036349
    30259 1ld8:B (1.8) BS01 GLC 2.5.1.58 GO:0003824 ... P49356 12036349
    30260 1ld8:B (1.8) BS02 FRU 2.5.1.58 GO:0003824 ... P49356 12036349
    30261 1ld8:B (1.8) BS03 ZN 2.5.1.58 GO:0003824 ... P49356 12036349
    30262 1ld8:B (1.8) BS04 FPP 2.5.1.58 GO:0003824 ... P49356 12036349
    30263 1ld8:B (1.8) BS05 U49 2.5.1.58 GO:0003824 ... P49356 12036349 MOAD: ic50=3.5nM
    30264 1ld9:A (2.4) BS01 peptide ? N/A P01897 9192660
    30265 1ld9:D (2.4) BS01 peptide ? N/A P01897 9192660
    30266 1ldb:A (2.8) BS01 SO4 1.1.1.27 GO:0003824 ... P00344 2330370
    30267 1ldc:A (2.9) BS01 FMN 1.1.2.3 GO:0016491 ... P00175 7632684
    30268 1ldc:A (2.9) BS02 HEM 1.1.2.3 GO:0016491 ... P00175 7632684
    30269 1ldc:A (2.9) BS03 PYR 1.1.2.3 GO:0016491 ... P00175 7632684
    30270 1ldc:B (2.9) BS01 FMN 1.1.2.3 GO:0016491 ... P00175 7632684
    30271 1ldc:B (2.9) BS02 PYR 1.1.2.3 GO:0016491 ... P00175 7632684
    30272 1lde:A (2.5) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30273 1lde:A (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30274 1lde:A (2.5) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 9132002
    30275 1lde:A (2.5) BS04 FPI 1.1.1.1 GO:0004022 ... P00327 9132002
    30276 1lde:B (2.5) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30277 1lde:B (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30278 1lde:B (2.5) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 9132002
    30279 1lde:B (2.5) BS04 FPI 1.1.1.1 GO:0004022 ... P00327 9132002
    30280 1lde:C (2.5) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30281 1lde:C (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30282 1lde:C (2.5) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 9132002
    30283 1lde:C (2.5) BS04 FPI 1.1.1.1 GO:0004022 ... P00327 9132002
    30284 1lde:D (2.5) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30285 1lde:D (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30286 1lde:D (2.5) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 9132002
    30287 1lde:D (2.5) BS04 FPI 1.1.1.1 GO:0004022 ... P00327 9132002
    30288 1ldg:A (1.74) BS01 NAI 1.1.1.27 GO:0003824 ... Q27743 8901865
    30289 1ldj:B (3.0) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0008270 ... P62877 11961546
    30290 1ldj:B (3.0) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0008270 ... P62877 11961546
    30291 1ldj:B (3.0) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0008270 ... P62877 11961546
    30292 1ldk:C (3.1) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0008270 ... P62877 11961546
    30293 1ldk:C (3.1) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0008270 ... P62877 11961546
    30294 1ldk:C (3.1) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0008270 ... P62877 11961546
    30295 1ldm:A (2.1) BS01 NAD 1.1.1.27 GO:0003824 ... P00341 3430615
    30296 1ldn:A (2.5) BS01 FBP 1.1.1.27 GO:0003824 ... P00344 1731077
    30297 1ldn:A (2.5) BS02 NAD 1.1.1.27 GO:0003824 ... P00344 1731077
    30298 1ldn:B (2.5) BS01 FBP 1.1.1.27 GO:0003824 ... P00344 1731077
    30299 1ldn:B (2.5) BS02 NAD 1.1.1.27 GO:0003824 ... P00344 1731077
    30300 1ldn:C (2.5) BS01 FBP 1.1.1.27 GO:0003824 ... P00344 1731077
    30301 1ldn:C (2.5) BS02 NAD 1.1.1.27 GO:0003824 ... P00344 1731077
    30302 1ldn:D (2.5) BS01 FBP 1.1.1.27 GO:0003824 ... P00344 1731077
    30303 1ldn:D (2.5) BS02 NAD 1.1.1.27 GO:0003824 ... P00344 1731077
    30304 1ldn:E (2.5) BS01 FBP 1.1.1.27 GO:0003824 ... P00344 1731077
    30305 1ldn:E (2.5) BS02 NAD 1.1.1.27 GO:0003824 ... P00344 1731077
    30306 1ldn:F (2.5) BS01 FBP 1.1.1.27 GO:0003824 ... P00344 1731077
    30307 1ldn:F (2.5) BS02 NAD 1.1.1.27 GO:0003824 ... P00344 1731077
    30308 1ldn:G (2.5) BS01 NAD 1.1.1.27 GO:0003824 ... P00344 1731077
    30309 1ldn:H (2.5) BS01 FBP 1.1.1.27 GO:0003824 ... P00344 1731077
    30310 1ldn:H (2.5) BS02 NAD 1.1.1.27 GO:0003824 ... P00344 1731077
    30311 1ldo:A (2.2) BS01 SNR ? GO:0005576 ... P02701 12055191
    30312 1ldo:B (2.2) BS01 SNR ? GO:0005576 ... P02701 12055191
    30313 1ldp:H (3.1) BS01 peptide ? N/A P01897 9620676
    30314 1ldp:H (3.1) BS02 peptide ? N/A P01897 9620676
    30315 1ldq:A (2.7) BS01 SHM ? GO:0005576 ... P02701 12055191
    30316 1ldq:B (2.7) BS01 SHM ? GO:0005576 ... P02701 12055191
    30317 1ldt:T (1.9) BS01 CA 3.4.21.4 GO:0004252 ... P00761 9242660
    30318 1ldy:A (2.5) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30319 1ldy:A (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30320 1ldy:A (2.5) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 9132002
    30321 1ldy:A (2.5) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 9132002
    30322 1ldy:B (2.5) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30323 1ldy:B (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30324 1ldy:B (2.5) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 9132002
    30325 1ldy:B (2.5) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 9132002
    30326 1ldy:C (2.5) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30327 1ldy:C (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30328 1ldy:C (2.5) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 9132002
    30329 1ldy:C (2.5) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 9132002
    30330 1ldy:D (2.5) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30331 1ldy:D (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 9132002
    30332 1ldy:D (2.5) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 9132002
    30333 1ldy:D (2.5) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 9132002
    30334 1le5:A (2.75) BS01 dna ? GO:0003677 ... Q04207 11970948
    30335 1le5:A (2.75) BS02 dna ? GO:0003677 ... Q04207 11970948
    30336 1le5:B (2.75) BS01 dna ? GO:0003677 ... P25799 11970948
    30337 1le5:B (2.75) BS02 dna ? GO:0003677 ... P25799 11970948
    30338 1le5:E (2.75) BS01 dna ? GO:0003677 ... Q04207 11970948
    30339 1le5:E (2.75) BS02 dna ? GO:0003677 ... Q04207 11970948
    30340 1le5:F (2.75) BS01 dna ? GO:0003677 ... P25799 11970948
    30341 1le5:F (2.75) BS02 dna ? GO:0003677 ... P25799 11970948
    30342 1le6:A (1.97) BS01 CA 3.1.1.4 GO:0000122 ... O15496 12161451
    30343 1le6:B (1.97) BS01 CA 3.1.1.4 GO:0000122 ... O15496 12161451
    30344 1le6:C (1.97) BS01 CA 3.1.1.4 GO:0000122 ... O15496 12161451
    30345 1le7:A (2.09) BS01 CA 3.1.1.4 GO:0000122 ... O15496 12161451
    30346 1le7:B (2.09) BS01 CA 3.1.1.4 GO:0000122 ... O15496 12161451
    30347 1le8:A (2.3) BS01 dna ? GO:0000981 ... P0CY10 12121651
    30348 1le8:A (2.3) BS02 dna ? GO:0000981 ... P0CY10 12121651
    30349 1le8:B (2.3) BS01 dna ? GO:0003677 ... P0CY08 12121651
    30350 1le8:B (2.3) BS02 dna ? GO:0003677 ... P0CY08 12121651
    30351 1le9:A (3.0) BS01 dna ? GO:0003677 ... Q04207 11970948
    30352 1le9:A (3.0) BS02 dna ? GO:0003677 ... Q04207 11970948
    30353 1le9:B (3.0) BS01 dna ? GO:0003677 ... P25799 11970948
    30354 1le9:B (3.0) BS02 dna ? GO:0003677 ... P25799 11970948
    30355 1le9:E (3.0) BS01 dna ? GO:0003677 ... Q04207 11970948
    30356 1le9:E (3.0) BS02 dna ? GO:0003677 ... Q04207 11970948
    30357 1le9:F (3.0) BS01 dna ? GO:0003677 ... P25799 11970948
    30358 1le9:F (3.0) BS02 dna ? GO:0003677 ... P25799 11970948
    30359 1lec:A (2.0) BS01 MN ? GO:0030246 ... P24146 8478943
    30360 1lec:A (2.0) BS02 CA ? GO:0030246 ... P24146 8478943
    30361 1lec:A (2.0) BS03 SO4 ? GO:0030246 ... P24146 8478943
    30362 1led:A (2.0) BS01 GAL ? GO:0030246 ... P24146 8478943
    30363 1led:A (2.0) BS02 FUC ? GO:0030246 ... P24146 8478943
    30364 1led:A (2.0) BS03 FUC ? GO:0030246 ... P24146 8478943
    30365 1led:A (2.0) BS04 FUC ? GO:0030246 ... P24146 8478943
    30366 1led:A (2.0) BS05 MN ? GO:0030246 ... P24146 8478943
    30367 1led:A (2.0) BS06 CA ? GO:0030246 ... P24146 8478943
    30368 1led:A (2.0) BS07 SO4 ? GO:0030246 ... P24146 8478943
    30369 1lee:A (1.9) BS01 R36 3.4.23.39 GO:0004190 ... P46925 12454457
    30370 1leg:A (1.75) BS01 peptide ? N/A P01901 11994422
    30371 1lei:A (2.7) BS01 dna ? GO:0003677 ... Q04207 11970949
    30372 1lei:A (2.7) BS02 dna ? GO:0003677 ... Q04207 11970949
    30373 1lei:B (2.7) BS01 dna ? GO:0003677 ... P25799 11970949
    30374 1lei:B (2.7) BS02 dna ? GO:0003677 ... P25799 11970949
    30375 1lek:A (2.15) BS01 peptide ? N/A P01901 11994422
    30376 1lek:A (2.15) BS02 FUC ? N/A P01901 11994422
    30377 1lel:A (2.9) BS01 BH7 ? GO:0005576 ... P02701 12055191
    30378 1lel:B (2.9) BS01 BH7 ? GO:0005576 ... P02701 12055191
    30379 1lem:A (3.0) BS01 GLC ? GO:0030246 ... P02870 7696853
    30380 1lem:A (3.0) BS02 CA ? GO:0030246 ... P02870 7696853
    30381 1lem:A (3.0) BS03 MN ? GO:0030246 ... P02870 7696853
    30382 1lem:B (3.0) BS01 GLC ? GO:0030246 ... P02870 7696853
    30383 1len:A (1.8) BS01 PO4 ? GO:0030246 ... P02870 7731952
    30384 1len:A (1.8) BS02 MN ? GO:0030246 ... P02870 7731952
    30385 1len:A (1.8) BS03 CA ? GO:0030246 ... P02870 7731952
    30386 1len:C (1.8) BS01 PO4 ? GO:0030246 ... P02870 7731952
    30387 1len:C (1.8) BS02 MN ? GO:0030246 ... P02870 7731952
    30388 1len:C (1.8) BS03 CA ? GO:0030246 ... P02870 7731952
    30389 1les:A (1.9) BS01 GLC ? GO:0030246 ... P02870 7592736
    30390 1les:A (1.9) BS02 CA ? GO:0030246 ... P02870 7592736
    30391 1les:A (1.9) BS03 MN ? GO:0030246 ... P02870 7592736
    30392 1les:B (1.9) BS01 GLC ? GO:0030246 ... P02870 7592736
    30393 1les:C (1.9) BS01 GLC ? GO:0030246 ... P02870 7592736
    30394 1les:C (1.9) BS02 CA ? GO:0030246 ... P02870 7592736
    30395 1les:C (1.9) BS03 MN ? GO:0030246 ... P02870 7592736
    30396 1les:D (1.9) BS01 GLC ? GO:0030246 ... P02870 7592736
    30397 1lev:A (2.15) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 12781194
    30398 1lev:A (2.15) BS02 MN 3.1.3.11 GO:0000122 ... P00636 12781194
    30399 1lev:A (2.15) BS03 MN 3.1.3.11 GO:0000122 ... P00636 12781194
    30400 1lev:A (2.15) BS04 CLI 3.1.3.11 GO:0000122 ... P00636 12781194 MOAD: ic50=2.5uM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).