SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    30601 1lhc:H (1.95) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 7893672
    30602 1lhc:H (1.95) BS03 DP7 3.4.21.5 GO:0004252 ... P00734 7893672 BindingDB: Ki=0.040000nM
    30603 1lhd:H (2.35) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 7893672
    30604 1lhd:H (2.35) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 7893672
    30605 1lhd:H (2.35) BS03 DI2 3.4.21.5 GO:0004252 ... P00734 7893672 BindingDB: Ki=0.240000nM
    30606 1lhe:H (2.25) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 7893672
    30607 1lhe:H (2.25) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 7893672
    30608 1lhe:H (2.25) BS03 DI3 3.4.21.5 GO:0004252 ... P00734 7893672
    30609 1lhf:H (2.4) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 7893672
    30610 1lhf:H (2.4) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 7893672
    30611 1lhf:H (2.4) BS03 DI4 3.4.21.5 GO:0004252 ... P00734 7893672
    30612 1lhg:H (2.25) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 7893672
    30613 1lhg:H (2.25) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 7893672
    30614 1lhg:H (2.25) BS03 DI5 3.4.21.5 GO:0004252 ... P00734 7893672
    30615 1lhn:A (2.0) BS01 CA ? N/A P04278 12065592
    30616 1lhn:A (2.0) BS02 ZN ? N/A P04278 12065592
    30617 1lhn:A (2.0) BS03 AON ? N/A P04278 12065592
    30618 1lho:A (2.0) BS01 CA ? N/A P04278 12065592
    30619 1lho:A (2.0) BS02 AOM ? N/A P04278 12065592
    30620 1lhr:A (2.6) BS01 ATP 2.7.1.35 GO:0005829 ... P82197 12235162
    30621 1lhr:B (2.6) BS01 ATP 2.7.1.35 GO:0005829 ... P82197 12235162
    30622 1lhs:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P56208 7714901
    30623 1lht:A (2.0) BS01 CYN 1.11.1.-
    1.7.-.-
    GO:0004601 ... P56208 7714901
    30624 1lht:A (2.0) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P56208 7714901
    30625 1lhu:A (1.8) BS01 CA ? N/A P04278 12065592
    30626 1lhu:A (1.8) BS02 EST ? N/A P04278 12065592 BindingDB: IC50=50nM, Kd=1.5nM
    30627 1lhv:A (2.0) BS01 CA ? N/A P04278 12065592
    30628 1lhv:A (2.0) BS02 ZN ? N/A P04278 12065592
    30629 1lhv:A (2.0) BS03 NOG ? N/A P04278 12065592 BindingDB: Kd=1.2nM
    30630 1lhw:A (1.75) BS01 CA ? N/A P04278 12228253
    30631 1lhw:A (1.75) BS02 ESM ? N/A P04278 12228253 MOAD: Kd=6.9nM
    BindingDB: Kd=0.832000nM
    30632 1li0:A (1.61) BS01 BCT 3.5.2.6 GO:0005515 ... P62593 12058046
    30633 1li3:A (1.85) BS01 3CH 3.2.1.17 GO:0003796 ... P00720 12217695 MOAD: Kd=56uM
    30634 1li4:A (2.01) BS01 NAD 3.13.2.1 GO:0004013 ... P23526 12590576
    30635 1li4:A (2.01) BS02 NOC 3.13.2.1 GO:0004013 ... P23526 12590576
    30636 1li5:A (2.3) BS01 ZN 6.1.1.16 GO:0000166 ... P21888 12032090
    30637 1li5:B (2.3) BS01 ZN 6.1.1.16 GO:0000166 ... P21888 12032090
    30638 1li6:A (2.0) BS01 5MP 3.2.1.17 GO:0003796 ... P00720 12217695 MOAD: Ka=6300M^-1
    30639 1li7:A (2.6) BS01 ZN 6.1.1.16 GO:0000166 ... P21888 12032090
    30640 1li7:A (2.6) BS02 CYS 6.1.1.16 GO:0000166 ... P21888 12032090
    30641 1li7:B (2.6) BS01 ZN 6.1.1.16 GO:0000166 ... P21888 12032090
    30642 1li7:B (2.6) BS02 CYS 6.1.1.16 GO:0000166 ... P21888 12032090
    30643 1lia:B (2.8) BS01 PUB ? GO:0009535 ... P84862 8876649
    30644 1lia:L (2.8) BS01 PUB ? GO:0009535 ... P84862 8876649
    30645 1lic:A (1.6) BS01 HDS ? GO:0005324 ... P04117 8161548
    30646 1lid:A (1.6) BS01 OLA ? GO:0005324 ... P04117 8463311
    30647 1lif:A (1.6) BS01 STE ? GO:0005324 ... P04117 8463311
    30648 1lih:A (2.2) BS01 PHN ? GO:0006935 ... P02941 1660187
    30649 1lii:A (1.73) BS01 ADN 2.7.1.20 GO:0004001 ... Q9TVW2 10801355 BindingDB: Ki=8900nM
    30650 1lii:A (1.73) BS02 ACP 2.7.1.20 GO:0004001 ... Q9TVW2 10801355
    30651 1lij:A (1.86) BS01 RPP 2.7.1.20 GO:0004001 ... Q9TVW2 10801355
    30652 1lij:A (1.86) BS02 ACP 2.7.1.20 GO:0004001 ... Q9TVW2 10801355
    30653 1lik:A (2.55) BS01 ADN 2.7.1.20 GO:0004001 ... Q9TVW2 10801355 BindingDB: Ki=8900nM
    30654 1lik:A (2.55) BS02 ADN 2.7.1.20 GO:0004001 ... Q9TVW2 10801355 BindingDB: Ki=8900nM
    30655 1lin:A (2.0) BS01 CA ? GO:0000922 ... P62157 7634090
    30656 1lin:A (2.0) BS02 CA ? GO:0000922 ... P62157 7634090
    30657 1lin:A (2.0) BS03 CA ? GO:0000922 ... P62157 7634090
    30658 1lin:A (2.0) BS04 CA ? GO:0000922 ... P62157 7634090
    30659 1lin:A (2.0) BS05 TFP ? GO:0000922 ... P62157 7634090 BindingDB: Kd=5000nM
    30660 1lin:A (2.0) BS06 TFP ? GO:0000922 ... P62157 7634090 BindingDB: Kd=5000nM
    30661 1lin:A (2.0) BS07 TFP ? GO:0000922 ... P62157 7634090 BindingDB: Kd=5000nM
    30662 1lin:A (2.0) BS08 TFP ? GO:0000922 ... P62157 7634090 BindingDB: Kd=5000nM
    30663 1lj0:A (2.0) BS01 HEM ? GO:0020037 ... P04166 12269800
    30664 1lj0:B (2.0) BS01 HEM ? GO:0020037 ... P04166 12269800
    30665 1lj0:C (2.0) BS01 HEM ? GO:0020037 ... P04166 12269800
    30666 1lj0:D (2.0) BS01 HEM ? GO:0020037 ... P04166 12269800
    30667 1lj1:A (2.0) BS01 HEM 1.3.2.4 GO:0009055 ... P0C278 12356299
    30668 1lj1:A (2.0) BS02 HEM 1.3.2.4 GO:0009055 ... P0C278 12356299
    30669 1lj1:A (2.0) BS03 HEM 1.3.2.4 GO:0009055 ... P0C278 12356299
    30670 1lj1:A (2.0) BS04 HEM 1.3.2.4 GO:0009055 ... P0C278 12356299
    30671 1lj1:A (2.0) BS05 FAD 1.3.2.4 GO:0009055 ... P0C278 12356299
    30672 1lj1:A (2.0) BS06 FUM 1.3.2.4 GO:0009055 ... P0C278 12356299
    30673 1lj1:B (2.0) BS01 HEM 1.3.2.4 GO:0009055 ... P0C278 12356299
    30674 1lj1:B (2.0) BS02 HEM 1.3.2.4 GO:0009055 ... P0C278 12356299
    30675 1lj1:B (2.0) BS03 HEM 1.3.2.4 GO:0009055 ... P0C278 12356299
    30676 1lj1:B (2.0) BS04 HEM 1.3.2.4 GO:0009055 ... P0C278 12356299
    30677 1lj1:B (2.0) BS05 FAD 1.3.2.4 GO:0009055 ... P0C278 12356299
    30678 1lj1:B (2.0) BS06 FUM 1.3.2.4 GO:0009055 ... P0C278 12356299
    30679 1lj2:A (2.38) BS01 peptide ? GO:0003723 ... P03536 12086624
    30680 1lj2:A (2.38) BS02 peptide ? GO:0003723 ... P03536 12086624
    30681 1lj2:B (2.38) BS01 peptide ? GO:0003723 ... P03536 12086624
    30682 1lj2:B (2.38) BS02 peptide ? GO:0003723 ... P03536 12086624
    30683 1lj8:A (1.7) BS01 NAD 1.1.1.67 GO:0003824 ... O08355 12196534
    30684 1ljr:A (3.2) BS01 GSH 2.5.1.18 GO:0004364 ... P0CG30 9551553
    30685 1ljr:B (3.2) BS01 GSH 2.5.1.18 GO:0004364 ... P0CG30 9551553
    30686 1ljt:A (2.0) BS01 HDI 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 11997397 MOAD: ic50=7uM
    BindingDB: IC50=7000nM, Ki=21000nM
    30687 1ljt:A (2.0) BS02 HDI 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 11997397 MOAD: ic50=7uM
    BindingDB: IC50=7000nM, Ki=21000nM
    30688 1ljt:B (2.0) BS01 HDI 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 11997397 MOAD: ic50=7uM
    BindingDB: IC50=7000nM, Ki=21000nM
    30689 1ljt:B (2.0) BS02 HDI 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 11997397 MOAD: ic50=7uM
    BindingDB: IC50=7000nM, Ki=21000nM
    30690 1ljt:C (2.0) BS01 HDI 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 11997397 MOAD: ic50=7uM
    BindingDB: IC50=7000nM, Ki=21000nM
    30691 1ljt:C (2.0) BS02 HDI 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 11997397 MOAD: ic50=7uM
    BindingDB: IC50=7000nM, Ki=21000nM
    30692 1ljw:A (2.16) BS01 HEM ? GO:0004601 ... P69905 12454461
    30693 1ljw:B (2.16) BS01 PO4 ? GO:0004601 ... P68871 12454461
    30694 1ljw:B (2.16) BS02 HEM ? GO:0004601 ... P68871 12454461
    30695 1ljz:A (-1.00) BS01 peptide ? GO:0005515 ... P60615 12160749
    30696 1lk2:A (1.35) BS01 peptide ? N/A P01901 14978103
    30697 1lk2:A (1.35) BS02 FUC ? N/A P01901 14978103
    30698 1lk6:I (2.8) BS01 peptide ? GO:0002020 ... P01008 12578831
    30699 1lk6:I (2.8) BS02 peptide ? GO:0002020 ... P01008 12578831
    30700 1lk6:I (2.8) BS03 GOL ? GO:0002020 ... P01008 12578831
    30701 1lk7:A (2.0) BS01 DER 5.3.1.6 GO:0004751 ... O50083 12057201
    30702 1lk7:B (2.0) BS01 DER 5.3.1.6 GO:0004751 ... O50083 12057201
    30703 1lk7:C (2.0) BS01 DER 5.3.1.6 GO:0004751 ... O50083 12057201
    30704 1lk7:D (2.0) BS01 DER 5.3.1.6 GO:0004751 ... O50083 12057201
    30705 1lk9:A (1.53) BS01 PLP 4.4.1.4 GO:0005773 ... Q01594 12235163
    30706 1lk9:B (1.53) BS01 FUC 4.4.1.4 GO:0005773 ... Q01594 12235163
    30707 1lk9:B (1.53) BS02 PLP 4.4.1.4 GO:0005773 ... Q01594 12235163
    30708 1lk9:B (1.53) BS03 DHA 4.4.1.4 GO:0005773 ... Q01594 12235163
    30709 1lka:A (1.7) BS01 CA 3.4.21.36 GO:0004252 ... P00772 12198296
    30710 1lkb:A (1.7) BS01 SO4 3.4.21.36 GO:0004252 ... P00772 12198296
    30711 1lkb:A (1.7) BS02 NA 3.4.21.36 GO:0004252 ... P00772 12198296
    30712 1lkc:A (1.8) BS01 PO4 4.1.1.81 GO:0003824 ... P97084 11939774
    30713 1lkc:A (1.8) BS02 PLP 4.1.1.81 GO:0003824 ... P97084 11939774
    30714 1lkd:A (1.7) BS01 FE2 1.13.11.39 GO:0003824 ... P47228 12415290
    30715 1lkd:A (1.7) BS02 FE2 1.13.11.39 GO:0003824 ... P47228 12415290
    30716 1lkd:A (1.7) BS03 BP6 1.13.11.39 GO:0003824 ... P47228 12415290
    30717 1lkd:A (1.7) BS04 BP6 1.13.11.39 GO:0003824 ... P47228 12415290
    30718 1lke:A (1.9) BS01 DOG ? GO:0000302 ... P09464 12823976 MOAD: Kd=30.2nM
    30719 1lkk:A (1.0) BS01 peptide 2.7.10.2 N/A P06239 8604142
    30720 1lkl:A (1.8) BS01 peptide 2.7.10.2 N/A P06239 8604142
    30721 1lkm:A (1.69) BS01 FE ? GO:0005506 ... P24931 12175244
    30722 1lkm:A (1.69) BS02 FE ? GO:0005506 ... P24931 12175244
    30723 1lkm:A (1.69) BS03 FE ? GO:0005506 ... P24931 12175244
    30724 1lko:A (1.63) BS01 FE2 ? GO:0005506 ... P24931 12175244
    30725 1lko:A (1.63) BS02 FE2 ? GO:0005506 ... P24931 12175244
    30726 1lko:A (1.63) BS03 FE2 ? GO:0005506 ... P24931 12175244
    30727 1lkp:A (1.64) BS01 AZI ? GO:0005506 ... P24931 12175244
    30728 1lkp:A (1.64) BS02 AZI ? GO:0005506 ... P24931 12175244
    30729 1lkp:A (1.64) BS03 FE2 ? GO:0005506 ... P24931 12175244
    30730 1lkp:A (1.64) BS04 FE2 ? GO:0005506 ... P24931 12175244
    30731 1lkp:A (1.64) BS05 FE2 ? GO:0005506 ... P24931 12175244
    30732 1lkq:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 12196530
    30733 1lks:A (1.1) BS01 NO3 3.2.1.17 GO:0003796 ... P00698 9757091
    30734 1lks:A (1.1) BS02 NO3 3.2.1.17 GO:0003796 ... P00698 9757091
    30735 1lks:A (1.1) BS03 NO3 3.2.1.17 GO:0003796 ... P00698 9757091
    30736 1lks:A (1.1) BS04 NO3 3.2.1.17 GO:0003796 ... P00698 9757091
    30737 1lks:A (1.1) BS05 NO3 3.2.1.17 GO:0003796 ... P00698 9757091
    30738 1lks:A (1.1) BS06 NO3 3.2.1.17 GO:0003796 ... P00698 9757091
    30739 1lkx:A (3.0) BS01 MG ? GO:0003774 ... Q03479 12032065
    30740 1lkx:A (3.0) BS02 ADP ? GO:0003774 ... Q03479 12032065
    30741 1lkx:B (3.0) BS01 MG ? GO:0003774 ... Q03479 12032065
    30742 1lkx:B (3.0) BS02 ADP ? GO:0003774 ... Q03479 12032065
    30743 1lkx:C (3.0) BS01 MG ? GO:0003774 ... Q03479 12032065
    30744 1lkx:C (3.0) BS02 ADP ? GO:0003774 ... Q03479 12032065
    30745 1lkx:D (3.0) BS01 MG ? GO:0003774 ... Q03479 12032065
    30746 1lkx:D (3.0) BS02 ADP ? GO:0003774 ... Q03479 12032065
    30747 1ll1:A (2.55) BS01 CU ? GO:0005344 ... P04253 N/A
    30748 1ll1:A (2.55) BS02 CU ? GO:0005344 ... P04253 N/A
    30749 1ll2:A (1.9) BS01 MN 2.4.1.186 GO:0005634 ... P13280 12051921
    30750 1ll2:A (1.9) BS02 UPG 2.4.1.186 GO:0005634 ... P13280 12051921
    30751 1ll4:A (2.8) BS01 AMI 3.2.1.14 GO:0004553 ... P0CB51 12079386
    30752 1ll4:B (2.8) BS01 AMI 3.2.1.14 GO:0004553 ... P0CB51 12079386
    30753 1ll4:C (2.8) BS01 AMI 3.2.1.14 GO:0004553 ... P0CB51 12079386
    30754 1ll4:D (2.8) BS01 AMI 3.2.1.14 GO:0004553 ... P0CB51 12079386
    30755 1ll5:A (1.8) BS01 IM2 3.5.2.6 GO:0008800 ... P00811 12435704
    30756 1ll5:B (1.8) BS01 IM2 3.5.2.6 GO:0008800 ... P00811 12435704
    30757 1ll9:B (1.87) BS01 AXL 3.5.2.6 GO:0008800 ... P00811 12323371
    30758 1lla:A (2.18) BS01 CU ? GO:0005344 ... P04253 8518732
    30759 1lla:A (2.18) BS02 CU ? GO:0005344 ... P04253 8518732
    30760 1lla:A (2.18) BS03 CL ? GO:0005344 ... P04253 8518732
    30761 1llb:B (1.72) BS01 PCN 3.5.2.6 GO:0008800 ... P00811 12323371
    30762 1llc:A (3.0) BS01 AFP 1.1.1.27 GO:0003824 ... P00343 N/A
    30763 1lld:A (2.0) BS01 NAD 1.1.1.27 GO:0003824 ... E8ME30 8450537
    30764 1lld:B (2.0) BS01 NAD 1.1.1.27 GO:0003824 ... E8ME30 8450537
    30765 1llf:A (1.4) BS01 F23 3.1.1.3 GO:0004806 ... P32947 12499539
    30766 1llf:B (1.4) BS01 F23 3.1.1.3 GO:0004806 ... P32947 12499539
    30767 1lli:A (2.1) BS01 dna ? GO:0003677 ... P03034 8278404
    30768 1lli:A (2.1) BS02 dna ? GO:0003677 ... P03034 8278404
    30769 1lli:B (2.1) BS01 dna ? GO:0003677 ... P03034 8278404
    30770 1lli:B (2.1) BS02 dna ? GO:0003677 ... P03034 8278404
    30771 1llm:C (1.5) BS01 dna ? GO:0003700 ... P03069
    P08046
    14621985
    30772 1llm:C (1.5) BS02 dna ? GO:0003700 ... P03069
    P08046
    14621985
    30773 1llm:C (1.5) BS03 ZN ? GO:0003700 ... P03069
    P08046
    14621985
    30774 1llm:C (1.5) BS04 ZN ? GO:0003700 ... P03069
    P08046
    14621985
    30775 1llm:D (1.5) BS01 dna ? GO:0003700 ... P03069
    P08046
    14621985
    30776 1llm:D (1.5) BS02 dna ? GO:0003700 ... P03069
    P08046
    14621985
    30777 1llm:D (1.5) BS03 ZN ? GO:0003700 ... P03069
    P08046
    14621985
    30778 1llm:D (1.5) BS04 ZN ? GO:0003700 ... P03069
    P08046
    14621985
    30779 1llo:A (1.85) BS01 AMI 3.2.1.14
    3.2.1.17
    GO:0003796 ... P23472 7495789
    30780 1llp:A (1.7) BS01 MAN 1.11.1.14 GO:0000302 ... P49012 10024453
    30781 1llp:A (1.7) BS02 CA 1.11.1.14 GO:0000302 ... P49012 10024453
    30782 1llp:A (1.7) BS03 CA 1.11.1.14 GO:0000302 ... P49012 10024453
    30783 1llp:A (1.7) BS04 HEM 1.11.1.14 GO:0000302 ... P49012 10024453
    30784 1llq:A (2.3) BS01 NAD 1.1.1.38 GO:0004470 ... P27443 12033925
    30785 1llq:B (2.3) BS01 NAD 1.1.1.38 GO:0004470 ... P27443 12033925
    30786 1llr:D (1.46) BS01 FNG ? GO:0005576 ... Q57193 12137534
    30787 1llr:D (1.46) BS02 LNQ ? GO:0005576 ... Q57193 12137534
    30788 1llr:E (1.46) BS01 FNG ? GO:0005576 ... Q57193 12137534
    30789 1llr:E (1.46) BS02 LNQ ? GO:0005576 ... Q57193 12137534
    30790 1llr:F (1.46) BS01 LNQ ? GO:0005576 ... Q57193 12137534
    30791 1llr:F (1.46) BS02 FNG ? GO:0005576 ... Q57193 12137534
    30792 1llr:G (1.46) BS01 FNG ? GO:0005576 ... Q57193 12137534
    30793 1llr:H (1.46) BS01 FNG ? GO:0005576 ... Q57193 12137534
    30794 1lls:A (1.8) BS01 XE ? GO:0005515 ... P0AEX9 12217701
    30795 1llu:A (2.3) BS01 ZN 1.1.1.1 GO:0004022 ... Q9HTD9 15152088
    30796 1llu:A (2.3) BS02 ZN 1.1.1.1 GO:0004022 ... Q9HTD9 15152088
    30797 1llu:A (2.3) BS03 NAD 1.1.1.1 GO:0004022 ... Q9HTD9 15152088
    30798 1llu:A (2.3) BS04 EDO 1.1.1.1 GO:0004022 ... Q9HTD9 15152088
    30799 1llu:A (2.3) BS05 EDO 1.1.1.1 GO:0004022 ... Q9HTD9 15152088
    30800 1llu:B (2.3) BS01 ZN 1.1.1.1 GO:0004022 ... Q9HTD9 15152088

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).