SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    31201 1lr5:C (1.9) BS01 MAN ? GO:0000911 ... P13689 12065401
    31202 1lr5:C (1.9) BS02 MAN ? GO:0000911 ... P13689 12065401
    31203 1lr5:C (1.9) BS03 ZN ? GO:0000911 ... P13689 12065401
    31204 1lr5:D (1.9) BS01 MAN ? GO:0000911 ... P13689 12065401
    31205 1lr5:D (1.9) BS02 MAN ? GO:0000911 ... P13689 12065401
    31206 1lr5:D (1.9) BS03 ZN ? GO:0000911 ... P13689 12065401
    31207 1lr6:A (1.9) BS01 HEM ? GO:0020037 ... P00171 12136141
    31208 1lr7:A (1.5) BS01 SO4 ? N/A P21674 12867435
    31209 1lr7:A (1.5) BS02 SO4 ? N/A P21674 12867435
    31210 1lr8:A (2.1) BS01 IHS ? N/A P21674 12867435 MOAD: Kd=10nM
    31211 1lra:A (1.9) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 7906540
    31212 1lrh:A (1.9) BS01 BMA ? GO:0000911 ... P13689 12065401
    31213 1lrh:A (1.9) BS02 MAN ? GO:0000911 ... P13689 12065401
    31214 1lrh:A (1.9) BS03 ZN ? GO:0000911 ... P13689 12065401
    31215 1lrh:A (1.9) BS04 NLA ? GO:0000911 ... P13689 12065401 MOAD: Kd=0.15uM
    31216 1lrh:B (1.9) BS01 MAN ? GO:0000911 ... P13689 12065401
    31217 1lrh:B (1.9) BS02 MAN ? GO:0000911 ... P13689 12065401
    31218 1lrh:B (1.9) BS03 ZN ? GO:0000911 ... P13689 12065401
    31219 1lrh:B (1.9) BS04 NLA ? GO:0000911 ... P13689 12065401 MOAD: Kd=0.15uM
    31220 1lrh:C (1.9) BS01 MAN ? GO:0000911 ... P13689 12065401
    31221 1lrh:C (1.9) BS02 MAN ? GO:0000911 ... P13689 12065401
    31222 1lrh:C (1.9) BS03 ZN ? GO:0000911 ... P13689 12065401
    31223 1lrh:C (1.9) BS04 NLA ? GO:0000911 ... P13689 12065401 MOAD: Kd=0.15uM
    31224 1lrh:D (1.9) BS01 MAN ? GO:0000911 ... P13689 12065401
    31225 1lrh:D (1.9) BS02 MAN ? GO:0000911 ... P13689 12065401
    31226 1lrh:D (1.9) BS03 ZN ? GO:0000911 ... P13689 12065401
    31227 1lrh:D (1.9) BS04 NLA ? GO:0000911 ... P13689 12065401 MOAD: Kd=0.15uM
    31228 1lri:A (1.45) BS01 CLR ? GO:0001907 ... P15570 12198300
    31229 1lrj:A (1.9) BS01 NAD 5.1.3.2 GO:0003978 ... P09147 12019271
    31230 1lrj:A (1.9) BS02 UD1 5.1.3.2 GO:0003978 ... P09147 12019271
    31231 1lrk:A (1.75) BS01 NAD 5.1.3.2 GO:0003978 ... P09147 12019271
    31232 1lrk:A (1.75) BS02 UD1 5.1.3.2 GO:0003978 ... P09147 12019271
    31233 1lrl:A (1.8) BS01 NAD 5.1.3.2 GO:0003978 ... P09147 12019271
    31234 1lrl:A (1.8) BS02 UPG 5.1.3.2 GO:0003978 ... P09147 12019271
    31235 1lrm:A (2.1) BS01 FE 1.14.16.1 GO:0004497 ... P00439 N/A
    31236 1lrm:A (2.1) BS02 HBI 1.14.16.1 GO:0004497 ... P00439 N/A
    31237 1lrn:A (2.1) BS01 PO4 2.5.1.55 GO:0005737 ... O66496 12441100
    31238 1lrn:B (2.1) BS01 PO4 2.5.1.55 GO:0005737 ... O66496 12441100
    31239 1lro:A (1.8) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 12441100
    31240 1lro:B (1.8) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 12441100
    31241 1lrq:A (1.8) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 12441100
    31242 1lrq:A (1.8) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 12441100
    31243 1lrq:B (1.8) BS01 PO4 2.5.1.55 GO:0005737 ... O66496 12441100
    31244 1lrr:A (2.65) BS01 dna ? GO:0003677 ... P0AFY8 12379844
    31245 1lrr:A (2.65) BS02 dna ? GO:0003677 ... P0AFY8 12379844
    31246 1lrr:D (2.65) BS01 dna ? GO:0003677 ... P0AFY8 12379844
    31247 1lrr:D (2.65) BS02 dna ? GO:0003677 ... P0AFY8 12379844
    31248 1lrt:A (2.2) BS01 IMP 1.1.1.205 GO:0003824 ... P50097 12403633
    31249 1lrt:A (2.2) BS02 TAD 1.1.1.205 GO:0003824 ... P50097 12403633 MOAD: Ki=2.3uM
    31250 1lrt:B (2.2) BS01 IMP 1.1.1.205 GO:0003824 ... P50097 12403633
    31251 1lrt:B (2.2) BS02 TAD 1.1.1.205 GO:0003824 ... P50097 12403633 MOAD: Ki=2.3uM
    31252 1lrt:C (2.2) BS01 IMP 1.1.1.205 GO:0003824 ... P50097 12403633
    31253 1lrt:C (2.2) BS02 TAD 1.1.1.205 GO:0003824 ... P50097 12403633 MOAD: Ki=2.3uM
    31254 1lrt:D (2.2) BS01 IMP 1.1.1.205 GO:0003824 ... P50097 12403633
    31255 1lrt:D (2.2) BS02 TAD 1.1.1.205 GO:0003824 ... P50097 12403633 MOAD: Ki=2.3uM
    31256 1lru:A (2.1) BS01 ZN 3.5.1.88 GO:0005515 ... P0A6K3 12126617
    31257 1lru:A (2.1) BS02 BB2 3.5.1.88 GO:0005515 ... P0A6K3 12126617
    31258 1lru:B (2.1) BS01 ZN 3.5.1.88 GO:0005515 ... P0A6K3 12126617
    31259 1lru:B (2.1) BS02 BB2 3.5.1.88 GO:0005515 ... P0A6K3 12126617
    31260 1lru:C (2.1) BS01 ZN 3.5.1.88 GO:0005515 ... P0A6K3 12126617
    31261 1lru:C (2.1) BS02 BB2 3.5.1.88 GO:0005515 ... P0A6K3 12126617
    31262 1lrw:A (2.5) BS01 CA 1.1.2.7 GO:0005509 ... P12293 14505072
    31263 1lrw:A (2.5) BS02 PQQ 1.1.2.7 GO:0005509 ... P12293 14505072
    31264 1lrw:C (2.5) BS01 CA 1.1.2.7 GO:0005509 ... P12293 14505072
    31265 1lrw:C (2.5) BS02 PQQ 1.1.2.7 GO:0005509 ... P12293 14505072
    31266 1lry:A (2.6) BS01 ZN 3.5.1.88 GO:0006412 ... Q9I7A8 12126617
    31267 1lry:A (2.6) BS02 BB2 3.5.1.88 GO:0006412 ... Q9I7A8 12126617
    31268 1ls1:A (1.1) BS01 OXY 3.6.5.4 GO:0003924 ... O07347 12095255
    31269 1ls1:A (1.1) BS02 OXY 3.6.5.4 GO:0003924 ... O07347 12095255
    31270 1ls3:A (2.7) BS01 PLP 2.1.2.1 GO:0000900 ... P07511 12438316
    31271 1ls3:A (2.7) BS02 GLY 2.1.2.1 GO:0000900 ... P07511 12438316
    31272 1ls3:A (2.7) BS03 PLP 2.1.2.1 GO:0000900 ... P07511 12438316
    31273 1ls3:A (2.7) BS04 TGF 2.1.2.1 GO:0000900 ... P07511 12438316
    31274 1ls3:B (2.7) BS01 PLP 2.1.2.1 GO:0000900 ... P07511 12438316
    31275 1ls3:B (2.7) BS02 PLP 2.1.2.1 GO:0000900 ... P07511 12438316
    31276 1ls3:B (2.7) BS03 TGF 2.1.2.1 GO:0000900 ... P07511 12438316
    31277 1ls3:C (2.7) BS01 GLY 2.1.2.1 GO:0000900 ... P07511 12438316
    31278 1ls3:C (2.7) BS02 PLP 2.1.2.1 GO:0000900 ... P07511 12438316
    31279 1ls3:C (2.7) BS03 PLP 2.1.2.1 GO:0000900 ... P07511 12438316
    31280 1ls3:C (2.7) BS04 TGF 2.1.2.1 GO:0000900 ... P07511 12438316
    31281 1ls3:D (2.7) BS01 PLP 2.1.2.1 GO:0000900 ... P07511 12438316
    31282 1ls3:D (2.7) BS02 PLP 2.1.2.1 GO:0000900 ... P07511 12438316
    31283 1ls3:D (2.7) BS03 TGF 2.1.2.1 GO:0000900 ... P07511 12438316
    31284 1ls5:A (2.8) BS01 peptide 3.4.23.39 GO:0004190 ... Q8IM16 12614616
    31285 1ls5:B (2.8) BS01 peptide 3.4.23.39 GO:0004190 ... Q8IM16 12614616
    31286 1ls6:A (1.9) BS01 A3P 2.8.2.1 GO:0004062 ... P50225 12471039
    31287 1ls6:A (1.9) BS02 NPO 2.8.2.1 GO:0004062 ... P50225 12471039
    31288 1ls6:A (1.9) BS03 NPO 2.8.2.1 GO:0004062 ... P50225 12471039
    31289 1ls9:A (1.3) BS01 HEM ? GO:0005506 ... P83391 12475218
    31290 1lsj:A (2.5) BS01 NAD 1.1.1.35 GO:0003857 ... Q16836 N/A
    31291 1lsj:B (2.5) BS01 NAD 1.1.1.35 GO:0003857 ... Q16836 N/A
    31292 1lsl:A (1.9) BS01 FUL ? N/A P07996 12391027
    31293 1lso:A (2.6) BS01 NAD 1.1.1.35 GO:0003857 ... Q16836 N/A
    31294 1lso:B (2.6) BS01 NAD 1.1.1.35 GO:0003857 ... Q16836 N/A
    31295 1lsp:A (2.45) BS01 BUL 3.2.1.17 GO:0003796 ... P00717 15299731
    31296 1lss:A (2.3) BS01 NAD ? GO:0005886 ... Q58505 12086676
    31297 1lss:B (2.3) BS01 NAD ? GO:0005886 ... Q58505 12086676
    31298 1lss:C (2.3) BS01 NAD ? GO:0005886 ... Q58505 12086676
    31299 1lss:D (2.3) BS01 NAD ? GO:0005886 ... Q58505 12086676
    31300 1lst:A (1.8) BS01 LYS ? GO:0016597 ... P02911 8496186
    31301 1lsu:A (2.85) BS01 NAI ? GO:0006813 ... O32080 12086676
    31302 1lsu:B (2.85) BS01 NAI ? GO:0006813 ... O32080 12086676
    31303 1lsv:A (2.4) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 12390021
    31304 1lsw:A (2.2) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 12390021
    31305 1lsx:A (2.7) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 12390021
    31306 1lsx:A (2.7) BS02 1MZ 2.7.13.3 GO:0006355 ... P23222 12390021
    31307 1lsz:A (2.0) BS01 NAG 3.2.1.17 GO:0003796 ... P00698 7966306
    31308 1lsz:A (2.0) BS02 NAG 3.2.1.17 GO:0003796 ... P00698 7966306
    31309 1lsz:A (2.0) BS03 NAG 3.2.1.17 GO:0003796 ... P00698 7966306
    31310 1lt0:A (2.4) BS01 CYN 2.7.13.3 GO:0006355 ... P23222 12390021
    31311 1lt0:A (2.4) BS02 HEM 2.7.13.3 GO:0006355 ... P23222 12390021
    31312 1lt1:A (1.91) BS01 MN N/A N/A N/A 12569505
    31313 1lt1:B (1.91) BS01 MN N/A N/A N/A 12569505
    31314 1lt1:C (1.91) BS01 MN N/A N/A N/A 12569505
    31315 1lt1:D (1.91) BS01 MN N/A N/A N/A 12569505
    31316 1lt1:D (1.91) BS02 MN N/A N/A N/A 12569505
    31317 1lt1:E (1.91) BS01 MN N/A N/A N/A 12569505
    31318 1lt1:F (1.91) BS01 MN N/A N/A N/A 12569505
    31319 1lt1:G (1.91) BS01 MN N/A N/A N/A 12569505
    31320 1lt1:H (1.91) BS01 MN N/A N/A N/A 12569505
    31321 1lt3:D (2.0) BS01 GAL ? GO:0005576 ... P32890 9416616
    31322 1lt3:E (2.0) BS01 GAL ? GO:0005576 ... P32890 9416616
    31323 1lt3:F (2.0) BS01 GAL ? GO:0005576 ... P32890 9416616
    31324 1lt3:G (2.0) BS01 GAL ? GO:0005576 ... P32890 9416616
    31325 1lt3:H (2.0) BS01 GAL ? GO:0005576 ... P32890 9416616
    31326 1lt4:D (2.0) BS01 GAL ? GO:0005576 ... P32890 9416617
    31327 1lt4:E (2.0) BS01 GAL ? GO:0005576 ... P32890 9416617
    31328 1lt4:F (2.0) BS01 GAL ? GO:0005576 ... P32890 9416617
    31329 1lt4:G (2.0) BS01 GAL ? GO:0005576 ... P32890 9416617
    31330 1lt4:H (2.0) BS01 GAL ? GO:0005576 ... P32890 9416617
    31331 1lt5:D (1.7) BS01 YIO ? GO:0005576 ... P32890 9384564
    31332 1lt5:E (1.7) BS01 YIO ? GO:0005576 ... P32890 9384564
    31333 1lt5:F (1.7) BS01 YIO ? GO:0005576 ... P32890 9384564
    31334 1lt5:F (1.7) BS02 GAL ? GO:0005576 ... P32890 9384564
    31335 1lt5:G (1.7) BS01 YIO ? GO:0005576 ... P32890 9384564
    31336 1lt5:H (1.7) BS01 YIO ? GO:0005576 ... P32890 9384564
    31337 1lt6:D (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564
    31338 1lt6:E (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564
    31339 1lt6:F (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564
    31340 1lt6:G (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564
    31341 1lt6:H (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564
    31342 1lt6:L (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564
    31343 1lt6:M (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564
    31344 1lt6:N (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564
    31345 1lt6:O (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564
    31346 1lt6:P (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564
    31347 1lt8:A (2.05) BS01 ZN 2.1.1.5 GO:0005634 ... Q93088 12220488
    31348 1lt8:A (2.05) BS02 CBH 2.1.1.5 GO:0005634 ... Q93088 12220488 BindingDB: Kd=280nM, Ki=12nM, IC50=87nM
    31349 1lt8:B (2.05) BS01 ZN 2.1.1.5 GO:0005634 ... Q93088 12220488
    31350 1lt8:B (2.05) BS02 CBH 2.1.1.5 GO:0005634 ... Q93088 12220488 BindingDB: Kd=280nM, Ki=12nM, IC50=87nM
    31351 1lt9:B (2.8) BS01 CA ? GO:0005102 ... P02675 12356313
    31352 1lt9:B (2.8) BS02 CA ? GO:0005102 ... P02675 12356313
    31353 1lt9:C (2.8) BS01 CA ? GO:0005102 ... P02679 12356313
    31354 1lt9:E (2.8) BS01 CA ? GO:0005102 ... P02675 12356313
    31355 1lt9:E (2.8) BS02 CA ? GO:0005102 ... P02675 12356313
    31356 1lt9:F (2.8) BS01 CA ? GO:0005102 ... P02679 12356313
    31357 1lta:D (2.2) BS01 GAL ? GO:0005576 ... P32890 7997185
    31358 1lta:E (2.2) BS01 GAL ? GO:0005576 ... P32890 7997185
    31359 1lta:F (2.2) BS01 GAL ? GO:0005576 ... P32890 7997185
    31360 1lta:G (2.2) BS01 GAL ? GO:0005576 ... P32890 7997185
    31361 1lta:H (2.2) BS01 GAL ? GO:0005576 ... P32890 7997185
    31362 1ltd:A (2.6) BS01 SO3 1.1.2.3 GO:0016491 ... P00175 8003966
    31363 1ltd:A (2.6) BS02 FMN 1.1.2.3 GO:0016491 ... P00175 8003966
    31364 1ltd:A (2.6) BS03 HEM 1.1.2.3 GO:0016491 ... P00175 8003966
    31365 1ltd:B (2.6) BS01 SO3 1.1.2.3 GO:0016491 ... P00175 8003966
    31366 1ltd:B (2.6) BS02 FMN 1.1.2.3 GO:0016491 ... P00175 8003966
    31367 1lte:A (2.0) BS01 BGC ? GO:0030246 ... P16404 1948067
    31368 1lte:A (2.0) BS02 GAL ? GO:0030246 ... P16404 1948067
    31369 1lte:A (2.0) BS03 MN ? GO:0030246 ... P16404 1948067
    31370 1lte:A (2.0) BS04 CA ? GO:0030246 ... P16404 1948067
    31371 1lth:R (2.5) BS01 FBP 1.1.1.27 GO:0003824 ... E8ME30 7656036
    31372 1lth:R (2.5) BS02 NAD 1.1.1.27 GO:0003824 ... E8ME30 7656036
    31373 1lth:T (2.5) BS01 FBP 1.1.1.27 GO:0003824 ... E8ME30 7656036
    31374 1lth:T (2.5) BS02 NAD 1.1.1.27 GO:0003824 ... E8ME30 7656036
    31375 1lti:D (2.13) BS01 GAL ? GO:0005576 ... P32890 8762150
    31376 1lti:E (2.13) BS01 GAL ? GO:0005576 ... P32890 8762150
    31377 1lti:G (2.13) BS01 GAL ? GO:0005576 ... P32890 8762150
    31378 1lti:H (2.13) BS01 GAL ? GO:0005576 ... P32890 8762150
    31379 1ltj:B (2.8) BS01 peptide ? GO:0005102 ... P02675 12356313
    31380 1ltj:B (2.8) BS02 CA ? GO:0005102 ... P02675 12356313
    31381 1ltj:C (2.8) BS01 peptide ? GO:0005102 ... P02679 12356313
    31382 1ltj:C (2.8) BS02 CA ? GO:0005102 ... P02679 12356313
    31383 1ltj:E (2.8) BS01 peptide ? GO:0005102 ... P02675 12356313
    31384 1ltj:E (2.8) BS02 CA ? GO:0005102 ... P02675 12356313
    31385 1ltj:F (2.8) BS01 peptide ? GO:0005102 ... P02679 12356313
    31386 1ltj:F (2.8) BS02 CA ? GO:0005102 ... P02679 12356313
    31387 1ltk:A (3.0) BS01 AMP 2.7.2.3 GO:0004618 ... P27362 N/A
    31388 1ltk:B (3.0) BS01 AMP 2.7.2.3 GO:0004618 ... P27362 N/A
    31389 1ltk:C (3.0) BS01 AMP 2.7.2.3 GO:0004618 ... P27362 N/A
    31390 1ltl:A (3.0) BS01 ZN 3.6.4.12 GO:0003677 ... O27798 12548282
    31391 1ltl:B (3.0) BS01 ZN 3.6.4.12 GO:0003677 ... O27798 12548282
    31392 1ltl:C (3.0) BS01 ZN 3.6.4.12 GO:0003677 ... O27798 12548282
    31393 1ltl:D (3.0) BS01 ZN 3.6.4.12 GO:0003677 ... O27798 12548282
    31394 1ltl:E (3.0) BS01 ZN 3.6.4.12 GO:0003677 ... O27798 12548282
    31395 1ltl:F (3.0) BS01 ZN 3.6.4.12 GO:0003677 ... O27798 12548282
    31396 1ltq:A (2.33) BS01 ADP 2.7.1.78
    3.1.3.34
    GO:0000166 ... P06855 12220496
    31397 1ltt:D (2.3) BS01 GAL ? GO:0005576 ... P32890 1741035
    31398 1ltt:E (2.3) BS01 GAL ? GO:0005576 ... P32890 1741035
    31399 1ltt:F (2.3) BS01 GAL ? GO:0005576 ... P32890 1741035
    31400 1ltt:G (2.3) BS01 GAL ? GO:0005576 ... P32890 1741035

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).