SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    323001 5aj9:B (2.0) BS02 SO4 3.1.6.1 GO:0004065 ... P51691 30012610
    323002 5aj9:B (2.0) BS03 SO4 3.1.6.1 GO:0004065 ... P51691 30012610
    323003 5aj9:B (2.0) BS04 SO4 3.1.6.1 GO:0004065 ... P51691 30012610
    323004 5aja:B (2.649) BS01 ZN ? GO:0019058 ... Q7ZB17 25856754
    323005 5ajb:A (1.8) BS01 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323006 5ajb:A (1.8) BS02 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323007 5ajb:A (1.8) BS03 GAL ? GO:0030246 ... A0A0S4TLR1 27198630
    323008 5ajb:A (1.8) BS04 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323009 5ajb:B (1.8) BS01 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323010 5ajb:B (1.8) BS02 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323011 5ajb:B (1.8) BS03 GAL ? GO:0030246 ... A0A0S4TLR1 27198630
    323012 5ajb:B (1.8) BS04 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323013 5ajb:C (1.8) BS01 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323014 5ajb:C (1.8) BS02 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323015 5ajb:C (1.8) BS03 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323016 5ajc:A (1.7) BS01 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323017 5ajc:A (1.7) BS02 FUL ? GO:0030246 ... A0A0S4TLR1 27198630
    323018 5ajc:A (1.7) BS03 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323019 5ajc:A (1.7) BS04 FUL ? GO:0030246 ... A0A0S4TLR1 27198630
    323020 5ajc:B (1.7) BS01 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323021 5ajc:B (1.7) BS02 FUL ? GO:0030246 ... A0A0S4TLR1 27198630
    323022 5ajc:B (1.7) BS03 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323023 5ajc:B (1.7) BS04 FUL ? GO:0030246 ... A0A0S4TLR1 27198630
    323024 5ajc:C (1.7) BS01 SIA ? GO:0030246 ... A0A0S4TLR1 27198630
    323025 5ajc:C (1.7) BS02 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323026 5ajc:C (1.7) BS03 FUL ? GO:0030246 ... A0A0S4TLR1 27198630
    323027 5ajc:C (1.7) BS04 FUC ? GO:0030246 ... A0A0S4TLR1 27198630
    323028 5ajc:C (1.7) BS05 FUL ? GO:0030246 ... A0A0S4TLR1 27198630
    323029 5ajg:A (1.11) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 27471775
    323030 5ajj:A (1.75) BS01 peptide ? GO:0033668 ... Q85365 25766319
    323031 5ajk:A (2.55) BS01 peptide ? GO:0033668 ... Q85365 25766319
    323032 5ajk:C (2.55) BS01 peptide ? GO:0033668 ... Q85365 25766319
    323033 5ajk:E (2.55) BS01 peptide ? GO:0033668 ... Q85365 25766319
    323034 5ajk:G (2.55) BS01 peptide ? GO:0033668 ... Q85365 25766319
    323035 5ajk:I (2.55) BS01 peptide ? GO:0033668 ... Q85365 25766319
    323036 5ajk:K (2.55) BS01 peptide ? GO:0033668 ... Q85365 25766319
    323037 5ajl:A (3.45) BS01 ZN 3.1.6.21 GO:0018741 ... Q9I5I9 N/A
    323038 5ajl:A (3.45) BS02 ZN 3.1.6.21 GO:0018741 ... Q9I5I9 N/A
    323039 5ajl:B (3.45) BS01 ZN 3.1.6.21 GO:0018741 ... Q9I5I9 N/A
    323040 5ajl:B (3.45) BS02 ZN 3.1.6.21 GO:0018741 ... Q9I5I9 N/A
    323041 5ajl:B (3.45) BS03 ZN 3.1.6.21 GO:0018741 ... Q9I5I9 N/A
    323042 5ajm:A (2.45) BS01 SIA ? GO:0019031 ... Q6DQ34 24889237
    323043 5ajn:A (1.67) BS01 peptide 2.4.1.41 GO:0000139 ... Q10471 25939779
    323044 5ajo:A (1.48) BS01 peptide 2.4.1.41 GO:0000139 ... Q10471 25939779
    323045 5ajp:A (1.65) BS01 peptide 2.4.1.41 GO:0000139 ... Q10471 25939779
    323046 5ajp:A (1.65) BS02 UDP 2.4.1.41 GO:0000139 ... Q10471 25939779
    323047 5ajp:A (1.65) BS03 MN 2.4.1.41 GO:0000139 ... Q10471 25939779
    323048 5ajq:A (2.2) BS01 DB8 2.7.11.1 GO:0004672 ... O94804 N/A BindingDB: IC50=52nM, Kd=7nM
    323049 5ajq:B (2.2) BS01 DB8 2.7.11.1 GO:0004672 ... O94804 N/A BindingDB: IC50=52nM, Kd=7nM
    323050 5ajr:A (2.75) BS01 HEM 1.14.14.154 GO:0004497 ... Q7Z1V1 26643331
    323051 5ajr:A (2.75) BS02 VT1 1.14.14.154 GO:0004497 ... Q7Z1V1 26643331
    323052 5aju:A (2.5) BS01 RP5 ? GO:0005829 ... M1VUY5 26010010
    323053 5ajv:B (3.01) BS01 8R2 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762 BindingDB: IC50=>30000nM
    323054 5ajv:B (3.01) BS02 FDP 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323055 5ajw:A (2.5) BS01 PHS 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323056 5ajw:A (2.5) BS02 F6P 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323057 5ajw:A (2.5) BS03 S6L 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762 MOAD: ic50=0.104uM
    BindingDB: IC50=104nM
    323058 5ajx:A (2.58) BS01 PHS 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323059 5ajx:A (2.58) BS02 F6P 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323060 5ajx:A (2.58) BS03 FD9 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762 BindingDB: IC50=>30000nM
    323061 5ajy:A (2.37) BS01 PHS 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323062 5ajy:A (2.37) BS02 F6P 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323063 5ajy:A (2.37) BS03 87T 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762 MOAD: ic50=0.496uM
    323064 5ajz:A (2.35) BS01 PHS 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323065 5ajz:A (2.35) BS02 F6P 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323066 5ajz:A (2.35) BS03 MJP 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762 MOAD: ic50=2.01uM
    BindingDB: IC50=2010nM
    323067 5ak0:A (2.03) BS01 PHS 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323068 5ak0:A (2.03) BS02 F6P 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762
    323069 5ak0:A (2.03) BS03 8V1 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 25849762 MOAD: ic50=0.021uM
    BindingDB: IC50=21nM
    323070 5ak2:A (2.19) BS01 85Z ? N/A P03372 25790336 MOAD: ic50=0.0039uM
    BindingDB: IC50=3.9nM
    323071 5ak2:B (2.19) BS01 85Z ? N/A P03372 25790336 MOAD: ic50=0.0039uM
    BindingDB: IC50=3.9nM
    323072 5ak3:A (2.28) BS01 XM0 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=8.49uM
    323073 5ak4:A (1.79) BS01 GVG 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=59.2uM
    323074 5ak4:A (1.79) BS02 GVG 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=59.2uM
    323075 5ak4:A (1.79) BS03 GVG 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=59.2uM
    323076 5ak5:A (2.22) BS01 V2Z 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=0.086uM
    323077 5ak6:A (2.15) BS01 YPN 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=326.4uM
    323078 5ak6:A (2.15) BS02 YPN 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=326.4uM
    323079 5ak7:A (1.46) BS01 ARG 3.5.3.- GO:0004668 ... Q9RQJ2 26209657
    323080 5ak8:A (1.48) BS01 ARG 3.5.3.- GO:0004668 ... Q9RQJ2 26209657
    323081 5ak9:A (2.601) BS01 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323082 5ak9:A (2.601) BS02 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323083 5ak9:A (2.601) BS03 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323084 5ak9:A (2.601) BS04 MN 3.1.-.- GO:0004519 ... P21505 26045557
    323085 5ak9:A (2.601) BS05 MN 3.1.-.- GO:0004519 ... P21505 26045557
    323086 5ak9:E (2.601) BS01 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323087 5ak9:E (2.601) BS02 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323088 5ak9:E (2.601) BS03 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323089 5ak9:E (2.601) BS04 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323090 5ak9:E (2.601) BS05 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323091 5ak9:E (2.601) BS06 MN 3.1.-.- GO:0004519 ... P21505 26045557
    323092 5ak9:E (2.601) BS07 MN 3.1.-.- GO:0004519 ... P21505 26045557
    323093 5ak9:J (2.601) BS01 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323094 5ak9:J (2.601) BS02 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323095 5ak9:J (2.601) BS03 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323096 5ak9:J (2.601) BS04 MN 3.1.-.- GO:0004519 ... P21505 26045557
    323097 5ak9:J (2.601) BS05 MN 3.1.-.- GO:0004519 ... P21505 26045557
    323098 5aka:0 (5.7) BS01 rna ? GO:0000027 ... P0A7N4 25775537
    323099 5aka:1 (5.7) BS01 rna ? GO:0000027 ... P0A7N9 25775537
    323100 5aka:2 (5.7) BS01 rna ? GO:0002181 ... P0A7P5 25775537
    323101 5aka:3 (5.7) BS01 rna ? GO:0002181 ... P0A7Q1 25775537
    323102 5aka:4 (5.7) BS01 rna ? GO:0002181 ... P0A7Q6 25775537
    323103 5aka:5 (5.7) BS01 peptide 3.6.5.4 GO:0003924 ... P0AGD7 25775537
    323104 5aka:5 (5.7) BS02 rna 3.6.5.4 GO:0003924 ... P0AGD7 25775537
    323105 5aka:5 (5.7) BS03 rna 3.6.5.4 GO:0003924 ... P0AGD7 25775537
    323106 5aka:C (5.7) BS01 rna ? GO:0000027 ... P60422 25775537
    323107 5aka:D (5.7) BS01 rna ? GO:0000027 ... P60438 25775537
    323108 5aka:E (5.7) BS01 rna ? GO:0001070 ... P60723 25775537
    323109 5aka:F (5.7) BS01 rna ? GO:0000027 ... P62399 25775537
    323110 5aka:F (5.7) BS02 rna ? GO:0000027 ... P62399 25775537
    323111 5aka:G (5.7) BS01 rna ? GO:0000027 ... P0AG55 25775537
    323112 5aka:H (5.7) BS01 rna ? GO:0002181 ... P0A7R1 25775537
    323113 5aka:I (5.7) BS01 rna ? GO:0000027 ... P0A7J7 25775537
    323114 5aka:J (5.7) BS01 rna ? GO:0002181 ... P0AA10 25775537
    323115 5aka:K (5.7) BS01 rna ? GO:0002181 ... P0ADY3 25775537
    323116 5aka:L (5.7) BS01 rna ? GO:0002181 ... P02413 25775537
    323117 5aka:M (5.7) BS01 rna ? GO:0000027 ... P0ADY7 25775537
    323118 5aka:M (5.7) BS02 rna ? GO:0000027 ... P0ADY7 25775537
    323119 5aka:N (5.7) BS01 rna ? GO:0000027 ... P0AG44 25775537
    323120 5aka:O (5.7) BS01 rna ? GO:0002181 ... P0C018 25775537
    323121 5aka:O (5.7) BS02 rna ? GO:0002181 ... P0C018 25775537
    323122 5aka:P (5.7) BS01 rna ? GO:0000027 ... P0A7K6 25775537
    323123 5aka:Q (5.7) BS01 rna ? GO:0000027 ... P0A7L3 25775537
    323124 5aka:R (5.7) BS01 rna ? GO:0002181 ... P0AG48 25775537
    323125 5aka:S (5.7) BS01 rna ? GO:0002181 ... P61175 25775537
    323126 5aka:T (5.7) BS01 rna ? GO:0000027 ... P0ADZ0 25775537
    323127 5aka:U (5.7) BS01 rna ? GO:0000027 ... P60624 25775537
    323128 5aka:V (5.7) BS01 rna ? GO:0000027 ... P68919 25775537
    323129 5aka:W (5.7) BS01 rna ? GO:0000027 ... P0A7L8 25775537
    323130 5aka:W (5.7) BS02 rna ? GO:0000027 ... P0A7L8 25775537
    323131 5aka:X (5.7) BS01 rna ? GO:0000027 ... P0A7M6 25775537
    323132 5aka:Y (5.7) BS01 rna ? GO:0000027 ... P0AG51 25775537
    323133 5aka:Y (5.7) BS02 rna ? GO:0000027 ... P0AG51 25775537
    323134 5aka:Z (5.7) BS01 rna ? GO:0002181 ... P0A7M9 25775537
    323135 5akb:A (4.71) BS01 ANP ? GO:0000018 ... P23909 26163658
    323136 5akb:A (4.71) BS02 ANP ? GO:0000018 ... P23909 26163658
    323137 5akb:B (4.71) BS01 ANP ? GO:0000018 ... P23909 26163658
    323138 5akb:B (4.71) BS02 ANP ? GO:0000018 ... P23909 26163658
    323139 5akb:E (4.71) BS01 ANP ? GO:0000018 ... P23909 26163658
    323140 5akc:A (6.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323141 5akc:A (6.6) BS02 ANP ? GO:0000018 ... P23909 26163658
    323142 5akc:B (6.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323143 5akc:B (6.6) BS02 ANP ? GO:0000018 ... P23909 26163658
    323144 5akc:E (6.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323145 5akc:E (6.6) BS02 ANP ? GO:0000018 ... P23909 26163658
    323146 5akc:F (6.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323147 5akc:F (6.6) BS02 ANP ? GO:0000018 ... P23909 26163658
    323148 5akc:I (6.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323149 5akc:I (6.6) BS02 ANP ? GO:0000018 ... P23909 26163658
    323150 5akc:J (6.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323151 5akc:J (6.6) BS02 ANP ? GO:0000018 ... P23909 26163658
    323152 5akd:A (7.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323153 5akd:B (7.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323154 5akd:E (7.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323155 5akd:F (7.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323156 5akd:I (7.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323157 5akd:J (7.6) BS01 ANP ? GO:0000018 ... P23909 26163658
    323158 5ake:A (2.26) BS01 6N0 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=0.015uM
    BindingDB: IC50=20nM
    323159 5akf:A (2.45) BS01 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323160 5akf:A (2.45) BS02 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323161 5akf:A (2.45) BS03 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323162 5akf:A (2.45) BS04 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323163 5akf:A (2.45) BS05 MN 3.1.-.- GO:0004519 ... P21505 26045557
    323164 5akf:E (2.45) BS01 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323165 5akf:E (2.45) BS02 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323166 5akf:E (2.45) BS03 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323167 5akf:E (2.45) BS04 MN 3.1.-.- GO:0004519 ... P21505 26045557
    323168 5akf:I (2.45) BS01 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323169 5akf:I (2.45) BS02 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323170 5akf:I (2.45) BS03 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323171 5akf:I (2.45) BS04 MN 3.1.-.- GO:0004519 ... P21505 26045557
    323172 5akg:A (2.51) BS01 6N6 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 BindingDB: IC50=34810nM
    323173 5akh:A (2.1) BS01 6NM 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=0.256uM
    323174 5aki:A (1.81) BS01 6NF 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=0.754uM
    323175 5akj:A (2.03) BS01 6N4 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50<1.37uM
    BindingDB: IC50=1370nM
    323176 5akk:A (1.9) BS01 1P8 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=99.3uM
    323177 5akk:A (1.9) BS02 1P8 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50=99.3uM
    323178 5akl:A (2.0) BS01 6N8 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 25931264 MOAD: ic50<0.086uM
    323179 5akm:A (2.4) BS01 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323180 5akm:A (2.4) BS02 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323181 5akm:A (2.4) BS03 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323182 5akm:A (2.4) BS04 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323183 5akm:A (2.4) BS05 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323184 5akm:A (2.4) BS06 MG 3.1.-.- GO:0004519 ... P21505 26045557
    323185 5akm:F (2.4) BS01 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323186 5akm:F (2.4) BS02 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323187 5akm:F (2.4) BS03 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323188 5akm:F (2.4) BS04 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323189 5akm:F (2.4) BS05 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323190 5akm:F (2.4) BS06 MG 3.1.-.- GO:0004519 ... P21505 26045557
    323191 5akm:F (2.4) BS07 MG 3.1.-.- GO:0004519 ... P21505 26045557
    323192 5akm:K (2.4) BS01 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323193 5akm:K (2.4) BS02 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323194 5akm:K (2.4) BS03 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323195 5akm:K (2.4) BS04 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323196 5akm:K (2.4) BS05 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323197 5akm:K (2.4) BS06 MG 3.1.-.- GO:0004519 ... P21505 26045557
    323198 5akn:A (2.75) BS01 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323199 5akn:A (2.75) BS02 dna 3.1.-.- GO:0004519 ... P21505 26045557
    323200 5akn:A (2.75) BS03 dna 3.1.-.- GO:0004519 ... P21505 26045557

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).