SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    32601 1m9n:B (1.93) BS01 AMZ 2.1.2.3
    3.5.4.10
    GO:0003937 ... P31335 12501179
    32602 1m9n:B (1.93) BS02 AMZ 2.1.2.3
    3.5.4.10
    GO:0003937 ... P31335 12501179
    32603 1m9n:B (1.93) BS03 XMP 2.1.2.3
    3.5.4.10
    GO:0003937 ... P31335 12501179 MOAD: Ki=0.12uM
    32604 1m9o:A (-1.00) BS01 ZN ? GO:0003729 ... P22893 12515557
    32605 1m9p:A (2.1) BS01 HEM ? GO:0004601 ... P69905 15858266
    32606 1m9p:B (2.1) BS01 HEM ? GO:0004601 ... P68871 15858266
    32607 1m9p:C (2.1) BS01 HEM ? GO:0004601 ... P69905 15858266
    32608 1m9p:D (2.1) BS01 HEM ? GO:0004601 ... P68871 15858266
    32609 1m9q:A (2.01) BS01 ZN 1.14.13.39 GO:0004517 ... P29474 12437348
    32610 1m9q:A (2.01) BS02 HEM 1.14.13.39 GO:0004517 ... P29474 12437348
    32611 1m9q:A (2.01) BS03 5NI 1.14.13.39 GO:0004517 ... P29474 12437348
    32612 1m9q:B (2.01) BS01 ZN 1.14.13.39 GO:0004517 ... P29474 12437348
    32613 1m9q:B (2.01) BS02 5NI 1.14.13.39 GO:0004517 ... P29474 12437348
    32614 1m9q:B (2.01) BS03 HEM 1.14.13.39 GO:0004517 ... P29474 12437348
    32615 1m9r:A (2.56) BS01 ZN 1.14.13.39 GO:0004517 ... P29474 12437348
    32616 1m9r:A (2.56) BS02 HEM 1.14.13.39 GO:0004517 ... P29474 12437348
    32617 1m9r:A (2.56) BS03 INE 1.14.13.39 GO:0004517 ... P29474 12437348
    32618 1m9r:A (2.56) BS04 INE 1.14.13.39 GO:0004517 ... P29474 12437348
    32619 1m9r:A (2.56) BS05 INE 1.14.13.39 GO:0004517 ... P29474 12437348
    32620 1m9r:B (2.56) BS01 ZN 1.14.13.39 GO:0004517 ... P29474 12437348
    32621 1m9r:B (2.56) BS02 INE 1.14.13.39 GO:0004517 ... P29474 12437348
    32622 1m9r:B (2.56) BS03 HEM 1.14.13.39 GO:0004517 ... P29474 12437348
    32623 1m9r:B (2.56) BS04 INE 1.14.13.39 GO:0004517 ... P29474 12437348
    32624 1m9r:B (2.56) BS05 INE 1.14.13.39 GO:0004517 ... P29474 12437348
    32625 1m9t:A (2.4) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 12437348
    32626 1m9t:A (2.4) BS02 H4B 1.14.13.39 GO:0004517 ... P29477 12437348
    32627 1m9t:A (2.4) BS03 INE 1.14.13.39 GO:0004517 ... P29477 12437348 BindingDB: IC50=2200nM
    32628 1m9t:B (2.4) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 12437348
    32629 1m9t:B (2.4) BS02 H4B 1.14.13.39 GO:0004517 ... P29477 12437348
    32630 1m9t:B (2.4) BS03 INE 1.14.13.39 GO:0004517 ... P29477 12437348 BindingDB: IC50=2200nM
    32631 1ma0:A (2.3) BS01 ZN 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12196016
    32632 1ma0:A (2.3) BS02 ZN 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12196016
    32633 1ma0:A (2.3) BS03 NAD 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12196016
    32634 1ma0:B (2.3) BS01 ZN 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12196016
    32635 1ma0:B (2.3) BS02 ZN 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12196016
    32636 1ma0:B (2.3) BS03 NAD 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12196016
    32637 1ma1:A (2.6) BS01 FE 1.15.1.1 GO:0004784 ... P18868 N/A
    32638 1ma1:B (2.6) BS01 FE 1.15.1.1 GO:0004784 ... P18868 N/A
    32639 1ma1:C (2.6) BS01 FE 1.15.1.1 GO:0004784 ... P18868 N/A
    32640 1ma1:D (2.6) BS01 FE 1.15.1.1 GO:0004784 ... P18868 N/A
    32641 1ma1:E (2.6) BS01 FE 1.15.1.1 GO:0004784 ... P18868 N/A
    32642 1ma1:F (2.6) BS01 FE 1.15.1.1 GO:0004784 ... P18868 N/A
    32643 1ma3:A (2.0) BS01 peptide 2.3.1.286 GO:0005737 ... O30124 12408821
    32644 1ma3:A (2.0) BS02 ZN 2.3.1.286 GO:0005737 ... O30124 12408821
    32645 1ma7:A (2.3) BS01 dna ? GO:0003677 ... P06956 12779336
    32646 1ma7:A (2.3) BS02 dna ? GO:0003677 ... P06956 12779336
    32647 1ma7:B (2.3) BS01 dna ? GO:0003677 ... P06956 12779336
    32648 1ma7:B (2.3) BS02 dna ? GO:0003677 ... P06956 12779336
    32649 1ma9:B (2.4) BS01 ATP 3.6.4.- GO:0000287 ... P68135 12554937
    32650 1maa:A (2.9) BS01 DME 3.1.1.7 GO:0001919 ... P21836 9915834 BindingDB: Ki=460nM
    32651 1maa:B (2.9) BS01 DME 3.1.1.7 GO:0001919 ... P21836 9915834 BindingDB: Ki=460nM
    32652 1maa:C (2.9) BS01 DME 3.1.1.7 GO:0001919 ... P21836 9915834 BindingDB: Ki=460nM
    32653 1maa:D (2.9) BS01 DME 3.1.1.7 GO:0001919 ... P21836 9915834 BindingDB: Ki=460nM
    32654 1mab:A (2.8) BS01 ATP 3.6.1.34 GO:0001937 ... P15999 9736690
    32655 1mab:B (2.8) BS01 ADP 7.1.2.2 GO:0001889 ... P10719 9736690
    32656 1mac:A (2.3) BS01 CA 3.2.1.73 GO:0004553 ... P23904 7852389
    32657 1mac:B (2.3) BS01 CA 3.2.1.73 GO:0004553 ... P23904 7852389
    32658 1mae:L (2.8) BS01 HDZ 1.4.9.1 GO:0009308 ... P22641 1390754
    32659 1maf:L (2.6) BS01 HDZ 1.4.9.1 GO:0009308 ... P22641 1390754
    32660 1mai:A (1.9) BS01 I3P 3.1.4.11 GO:0035556 ... P10688 8521504 MOAD: Kd=210nM
    32661 1map:A (2.4) BS01 KET 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 7903048
    32662 1maq:A (2.3) BS01 PGU 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 7903048
    32663 1mar:A (1.8) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 8234324
    32664 1mat:A (2.4) BS01 CO 3.4.11.18 GO:0004239 ... P0AE18 8471602
    32665 1mat:A (2.4) BS02 CO 3.4.11.18 GO:0004239 ... P0AE18 8471602
    32666 1mau:A (2.15) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451
    32667 1mau:A (2.15) BS02 LTN 6.1.1.2 GO:0000166 ... P00953 12473451
    32668 1mav:A (1.6) BS01 MN ? GO:0000160 ... Q9A5I4 12176983
    32669 1mav:A (1.6) BS02 MN ? GO:0000160 ... Q9A5I4 12176983
    32670 1maw:A (3.0) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451
    32671 1maw:B (3.0) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451
    32672 1maw:C (3.0) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451
    32673 1maw:D (3.0) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451
    32674 1maw:E (3.0) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451
    32675 1maw:F (3.0) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451
    32676 1max:A (1.8) BS01 CA 3.4.21.4 GO:0004175 ... P00760 8605148
    32677 1max:A (1.8) BS02 ZAP 3.4.21.4 GO:0004175 ... P00760 8605148
    32678 1may:A (1.8) BS01 CA 3.4.21.4 GO:0004175 ... P00760 8605148
    32679 1may:A (1.8) BS02 ZAP 3.4.21.4 GO:0004175 ... P00760 8605148
    32680 1mb0:A (2.0) BS01 MN ? GO:0000160 ... Q9A5I4 12176983
    32681 1mb2:A (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 12473451
    32682 1mb2:B (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 12473451
    32683 1mb2:C (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 12473451
    32684 1mb2:D (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 12473451
    32685 1mb2:E (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 12473451
    32686 1mb2:F (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 12473451
    32687 1mb3:A (1.41) BS01 MG ? GO:0000160 ... Q9A5I4 12176983
    32688 1mb4:A (1.84) BS01 CYS 1.2.1.11 GO:0004073 ... Q9KQG2 12493825
    32689 1mb4:A (1.84) BS02 NDP 1.2.1.11 GO:0004073 ... Q9KQG2 12493825
    32690 1mb4:B (1.84) BS01 CYS 1.2.1.11 GO:0004073 ... Q9KQG2 12493825
    32691 1mb4:B (1.84) BS02 NDP 1.2.1.11 GO:0004073 ... Q9KQG2 12493825
    32692 1mb9:A (2.11) BS01 MG 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32693 1mb9:A (2.11) BS02 POP 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32694 1mb9:A (2.11) BS03 AMP 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32695 1mb9:A (2.11) BS04 ATP 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32696 1mb9:B (2.11) BS01 MG 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32697 1mb9:B (2.11) BS02 ATP 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32698 1mba:A (1.6) BS01 HEM ? GO:0005506 ... P02210 2926816
    32699 1mbb:A (2.3) BS01 EEB 1.3.1.98 GO:0005737 ... P08373 8634262
    32700 1mbb:A (2.3) BS02 FAD 1.3.1.98 GO:0005737 ... P08373 8634262
    32701 1mbc:A (1.5) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 3820301
    32702 1mbd:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    32703 1mbi:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 1994031
    32704 1mbi:A (2.0) BS02 IMD 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 1994031
    32705 1mbn:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    32706 1mbo:A (1.6) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 7463482
    32707 1mbo:A (1.6) BS02 OXY 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 7463482
    32708 1mbq:A (1.8) BS01 CA 3.4.21.4 GO:0004252 ... Q8AV11 12445776
    32709 1mbq:A (1.8) BS02 BEN 3.4.21.4 GO:0004252 ... Q8AV11 12445776
    32710 1mbs:A (2.5) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68081 745243
    32711 1mbt:A (3.0) BS01 FAD 1.3.1.98 GO:0005737 ... P08373 8805513
    32712 1mbu:A (2.3) BS01 YBT ? N/A P0ABH9 12235156
    32713 1mbu:B (2.3) BS01 YBT ? N/A P0ABH9 12235156
    32714 1mbu:B (2.3) BS02 YBT ? N/A P0ABH9 12235156
    32715 1mbx:A (2.25) BS01 ZN ? N/A P0ABH9 12235156
    32716 1mbx:A (2.25) BS02 YBT ? N/A P0ABH9 12235156
    32717 1mbx:A (2.25) BS03 YBT ? N/A P0ABH9 12235156
    32718 1mbx:B (2.25) BS01 ZN ? N/A P0ABH9 12235156
    32719 1mbx:B (2.25) BS02 YBT ? N/A P0ABH9 12235156
    32720 1mbx:B (2.25) BS03 YBT ? N/A P0ABH9 12235156
    32721 1mbx:D (2.25) BS01 YBT ? GO:0005515 ... P0A8Q6 12235156
    32722 1mbx:D (2.25) BS02 YBT ? GO:0005515 ... P0A8Q6 12235156
    32723 1mbz:A (2.47) BS01 MG 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32724 1mbz:A (2.47) BS02 POP 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32725 1mbz:A (2.47) BS03 IOT 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32726 1mbz:B (2.47) BS01 MG 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32727 1mbz:B (2.47) BS02 IOT 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32728 1mbz:B (2.47) BS03 POP 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32729 1mc0:A (2.86) BS01 PCG 3.1.4.17 N/A Q922S4 12271124
    32730 1mc1:A (2.16) BS01 MG 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32731 1mc1:A (2.16) BS02 POP 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32732 1mc1:A (2.16) BS03 AMP 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32733 1mc1:A (2.16) BS04 PCX 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32734 1mc1:B (2.16) BS01 MG 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32735 1mc1:B (2.16) BS02 PCX 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32736 1mc1:B (2.16) BS03 AMP 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32737 1mc1:B (2.16) BS04 POP 6.3.3.4 GO:0004066 ... P0DJQ7 12409610
    32738 1mc3:A (2.6) BS01 MG 2.7.7.24 GO:0000271 ... P61887 12171937
    32739 1mc3:A (2.6) BS02 TTP 2.7.7.24 GO:0000271 ... P61887 12171937
    32740 1mc3:B (2.6) BS01 MG 2.7.7.24 GO:0000271 ... P61887 12171937
    32741 1mc3:B (2.6) BS02 TTP 2.7.7.24 GO:0000271 ... P61887 12171937
    32742 1mc5:A (2.6) BS01 ZN 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12484756
    32743 1mc5:A (2.6) BS02 ZN 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12484756
    32744 1mc5:A (2.6) BS03 NAD 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12484756
    32745 1mc5:A (2.6) BS04 AHE 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12484756
    32746 1mc5:B (2.6) BS01 ZN 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12484756
    32747 1mc5:B (2.6) BS02 ZN 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12484756
    32748 1mc5:B (2.6) BS03 NAD 1.1.1.-
    1.1.1.1
    1.1.1.284
    GO:0004022 ... P11766 12484756
    32749 1mc9:A (1.7) BS01 XYP 3.2.1.8 N/A P26514 11914070
    32750 1mc9:A (1.7) BS02 XYP 3.2.1.8 N/A P26514 11914070
    32751 1mcb:A (2.7) BS01 peptide ? GO:0005515 ... Q6PIK1 8346191
    32752 1mcb:B (2.7) BS01 peptide ? GO:0005515 ... Q6PIK1 8346191
    32753 1mcc:A (2.7) BS01 peptide N/A N/A N/A 8346191
    32754 1mcc:B (2.7) BS01 peptide N/A N/A N/A 8346191
    32755 1mcd:A () BS01 peptide ? GO:0005576 ... P0DOX8 8346191
    32756 1mcd:B () BS01 peptide ? GO:0005576 ... P0DOX8 8346191
    32757 1mce:A (2.7) BS01 peptide ? GO:0005576 ... P0DOX8 8346191
    32758 1mce:B (2.7) BS01 peptide ? GO:0005576 ... P0DOX8 8346191
    32759 1mcf:A (2.7) BS01 peptide ? GO:0005515 ... Q6PIK1 8346191
    32760 1mcf:B (2.7) BS01 peptide ? GO:0005515 ... Q6PIK1 8346191
    32761 1mch:A (2.7) BS01 peptide ? GO:0005515 ... Q6PIK1 8346191
    32762 1mch:B (2.7) BS01 peptide ? GO:0005515 ... Q6PIK1 8346191
    32763 1mci:A (2.7) BS01 peptide N/A N/A N/A 8346191
    32764 1mci:B (2.7) BS01 peptide N/A N/A N/A 8346191
    32765 1mcj:A (2.7) BS01 peptide N/A N/A N/A 8346191
    32766 1mcj:B (2.7) BS01 DPN N/A N/A N/A 8346191
    32767 1mck:A (2.7) BS01 peptide N/A N/A N/A 8346191
    32768 1mck:B (2.7) BS01 peptide N/A N/A N/A 8346191
    32769 1mcl:A (2.7) BS01 peptide ? GO:0005515 ... Q6PIK1 8346191
    32770 1mcl:B (2.7) BS01 peptide ? GO:0005515 ... Q6PIK1 8346191
    32771 1mcn:A (2.7) BS01 peptide N/A N/A N/A 8346191
    32772 1mcn:B (2.7) BS01 peptide N/A N/A N/A 8346191
    32773 1mco:H (3.2) BS01 MAN N/A N/A N/A 8483943
    32774 1mco:H (3.2) BS02 GAL N/A N/A N/A 8483943
    32775 1mco:H (3.2) BS03 SIA N/A N/A N/A 8483943
    32776 1mco:H (3.2) BS04 GUP N/A N/A N/A 8483943
    32777 1mco:H (3.2) BS05 FUL N/A N/A N/A 8483943
    32778 1mcp:H (2.7) BS01 SO4 ? GO:0003823 ... P01789 3097327
    32779 1mcq:B (2.7) BS01 peptide N/A N/A N/A 8346191
    32780 1mcr:A (2.7) BS01 peptide N/A N/A N/A 8346191
    32781 1mcr:B (2.7) BS01 peptide N/A N/A N/A 8346191
    32782 1mcs:A (2.7) BS01 peptide N/A N/A N/A 8346191
    32783 1mcs:B (2.7) BS01 peptide N/A N/A N/A 8346191
    32784 1mct:A (1.6) BS01 peptide 3.4.21.4 GO:0004252 ... P00761 8445634
    32785 1mct:A (1.6) BS02 CA 3.4.21.4 GO:0004252 ... P00761 8445634
    32786 1mcv:A (1.8) BS01 peptide 3.4.21.36 GO:0004252 ... P00772 12554935
    32787 1mcv:A (1.8) BS02 CA 3.4.21.36 GO:0004252 ... P00772 12554935
    32788 1mcx:A (2.03) BS01 CA ? GO:0001786 ... P19619 12595246
    32789 1mcx:A (2.03) BS02 CA ? GO:0001786 ... P19619 12595246
    32790 1mcx:A (2.03) BS03 CA ? GO:0001786 ... P19619 12595246
    32791 1mcx:A (2.03) BS04 CA ? GO:0001786 ... P19619 12595246
    32792 1mcx:A (2.03) BS05 CA ? GO:0001786 ... P19619 12595246
    32793 1mcx:A (2.03) BS06 CA ? GO:0001786 ... P19619 12595246
    32794 1mcx:A (2.03) BS07 CA ? GO:0001786 ... P19619 12595246
    32795 1mcx:A (2.03) BS08 CA ? GO:0001786 ... P19619 12595246
    32796 1mcy:A (1.7) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 7657659
    32797 1mcz:A (2.8) BS01 MG 4.1.1.7 GO:0000287 ... P20906 12590569
    32798 1mcz:A (2.8) BS02 MG 4.1.1.7 GO:0000287 ... P20906 12590569
    32799 1mcz:A (2.8) BS03 TPP 4.1.1.7 GO:0000287 ... P20906 12590569
    32800 1mcz:A (2.8) BS04 RMN 4.1.1.7 GO:0000287 ... P20906 12590569

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).