SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    331001 5cvu:D (1.8) BS02 SAH 2.1.1.146 GO:0008168 ... O04385 N/A
    331002 5cvv:A (1.73) BS01 SAH 2.1.1.146 GO:0008168 ... O04385 N/A
    331003 5cvv:A (1.73) BS02 N7I 2.1.1.146 GO:0008168 ... O04385 N/A
    331004 5cvv:B (1.73) BS01 SAH 2.1.1.146 GO:0008168 ... O04385 N/A
    331005 5cvw:A (1.25) BS01 CA 4.6.1.1 GO:0005509 ... J7QLC0 27058787
    331006 5cvw:A (1.25) BS02 CA 4.6.1.1 GO:0005509 ... J7QLC0 27058787
    331007 5cvw:A (1.25) BS03 CA 4.6.1.1 GO:0005509 ... J7QLC0 27058787
    331008 5cvw:A (1.25) BS04 CA 4.6.1.1 GO:0005509 ... J7QLC0 27058787
    331009 5cvw:A (1.25) BS05 CA 4.6.1.1 GO:0005509 ... J7QLC0 27058787
    331010 5cvw:A (1.25) BS06 CA 4.6.1.1 GO:0005509 ... J7QLC0 27058787
    331011 5cvw:A (1.25) BS07 CA 4.6.1.1 GO:0005509 ... J7QLC0 27058787
    331012 5cvw:A (1.25) BS08 CA 4.6.1.1 GO:0005509 ... J7QLC0 27058787
    331013 5cvy:A (2.0) BS01 BGC ? GO:0004553 ... A8FDC4 29213319
    331014 5cvy:A (2.0) BS02 BGC ? GO:0004553 ... A8FDC4 29213319
    331015 5cvy:A (2.0) BS03 BGC ? GO:0004553 ... A8FDC4 29213319
    331016 5cvy:A (2.0) BS04 BGC ? GO:0004553 ... A8FDC4 29213319
    331017 5cvy:A (2.0) BS05 BGC ? GO:0004553 ... A8FDC4 29213319
    331018 5cvy:A (2.0) BS06 BGC ? GO:0004553 ... A8FDC4 29213319
    331019 5cvy:A (2.0) BS07 BGC ? GO:0004553 ... A8FDC4 29213319
    331020 5cvy:A (2.0) BS08 BGC ? GO:0004553 ... A8FDC4 29213319
    331021 5cvy:A (2.0) BS09 CA ? GO:0004553 ... A8FDC4 29213319
    331022 5cw1:A (1.45) BS01 PYZ 3.4.21.64 GO:0004252 ... P06873 N/A
    331023 5cw1:A (1.45) BS02 PYZ 3.4.21.64 GO:0004252 ... P06873 N/A
    331024 5cw1:A (1.45) BS03 PYZ 3.4.21.64 GO:0004252 ... P06873 N/A
    331025 5cw2:A (2.0) BS01 BSU 3.3.2.3 GO:0003824 ... G7CF24 N/A
    331026 5cw2:B (2.0) BS01 BSU 3.3.2.3 GO:0003824 ... G7CF24 N/A
    331027 5cw2:C (2.0) BS01 BSU 3.3.2.3 GO:0003824 ... G7CF24 N/A
    331028 5cw2:D (2.0) BS01 BSU 3.3.2.3 GO:0003824 ... G7CF24 N/A
    331029 5cw3:A (2.55) BS01 ZN 3.4.19.- GO:0000922 ... E2AXC7 26344097
    331030 5cw3:C (2.55) BS01 ZN 3.4.19.- GO:0000922 ... E2AXC7 26344097
    331031 5cw4:A (2.543) BS01 ZN 3.4.19.- GO:0000922 ... E2AXC7 26344097
    331032 5cw6:A (3.193) BS01 ZN 3.4.19.- GO:0000922 ... A0A8M3B525 26344097
    331033 5cw8:A (2.6) BS01 55X ? GO:0000976 ... P96856 26858250
    331034 5cw8:B (2.6) BS01 55X ? GO:0000976 ... P96856 26858250
    331035 5cwa:A (2.1) BS01 0GA 4.1.3.27 GO:0000162 ... P9WFX2 26527146 MOAD: ic50=17uM
    331036 5cwe:A (2.39) BS01 HEM ? GO:0004497 ... Q82LM3 N/A
    331037 5cwe:B (2.39) BS01 HEM ? GO:0004497 ... Q82LM3 N/A
    331038 5cwf:A (1.8) BS01 CA N/A N/A N/A 26675729
    331039 5cwf:A (1.8) BS02 CA N/A N/A N/A 26675729
    331040 5cwf:A (1.8) BS03 CA N/A N/A N/A 26675729
    331041 5cwf:A (1.8) BS04 CA N/A N/A N/A 26675729
    331042 5cwf:A (1.8) BS05 CA N/A N/A N/A 26675729
    331043 5cwf:A (1.8) BS06 CA N/A N/A N/A 26675729
    331044 5cwf:B (1.8) BS01 CA N/A N/A N/A 26675729
    331045 5cwf:B (1.8) BS02 CA N/A N/A N/A 26675729
    331046 5cwf:B (1.8) BS03 CA N/A N/A N/A 26675729
    331047 5cwf:B (1.8) BS04 CA N/A N/A N/A 26675729
    331048 5cwf:B (1.8) BS05 CA N/A N/A N/A 26675729
    331049 5cwf:B (1.8) BS06 CA N/A N/A N/A 26675729
    331050 5cwf:B (1.8) BS07 CA N/A N/A N/A 26675729
    331051 5cwf:C (1.8) BS01 CA N/A N/A N/A 26675729
    331052 5cwf:C (1.8) BS02 CA N/A N/A N/A 26675729
    331053 5cwf:C (1.8) BS03 CA N/A N/A N/A 26675729
    331054 5cwf:C (1.8) BS04 CA N/A N/A N/A 26675729
    331055 5cwf:C (1.8) BS05 CA N/A N/A N/A 26675729
    331056 5cwf:C (1.8) BS06 CA N/A N/A N/A 26675729
    331057 5cwf:C (1.8) BS07 CA N/A N/A N/A 26675729
    331058 5cwf:D (1.8) BS01 CA N/A N/A N/A 26675729
    331059 5cwf:D (1.8) BS02 CA N/A N/A N/A 26675729
    331060 5cwf:D (1.8) BS03 CA N/A N/A N/A 26675729
    331061 5cwf:D (1.8) BS04 CA N/A N/A N/A 26675729
    331062 5cwr:A (2.5) BS01 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331063 5cwr:A (2.5) BS02 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331064 5cwr:A (2.5) BS03 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331065 5cwr:A (2.5) BS04 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331066 5cwr:A (2.5) BS05 DCP 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331067 5cwr:A (2.5) BS06 CA 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331068 5cwr:A (2.5) BS07 CA 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331069 5cwr:B (2.5) BS01 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331070 5cwr:B (2.5) BS02 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331071 5cwr:B (2.5) BS03 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331072 5cwr:B (2.5) BS04 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331073 5cwr:B (2.5) BS05 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331074 5cwr:B (2.5) BS06 DCP 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331075 5cwr:B (2.5) BS07 CA 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331076 5cwr:B (2.5) BS08 CA 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    331077 5cwx:A (2.2) BS01 56K 3.5.1.88 GO:0042586 ... Q5H3Z2 N/A
    331078 5cwy:A (2.4) BS01 4WL 3.5.1.88 GO:0042586 ... Q5H3Z2 N/A
    331079 5cx0:A (2.5) BS01 56L 3.5.1.88 GO:0042586 ... Q5H3Z2 N/A
    331080 5cx1:A (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    331081 5cx1:A (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    331082 5cx1:B (1.7476) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    331083 5cx1:B (1.7476) BS02 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331084 5cx1:B (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331085 5cx1:C (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    331086 5cx1:C (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    331087 5cx1:D (1.7476) BS01 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331088 5cx1:D (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    331089 5cx1:D (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331090 5cx1:E (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    331091 5cx1:E (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    331092 5cx1:F (1.7476) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    331093 5cx1:F (1.7476) BS02 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331094 5cx1:F (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331095 5cx1:G (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    331096 5cx1:G (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    331097 5cx1:H (1.7476) BS01 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331098 5cx1:H (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    331099 5cx1:H (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331100 5cx1:I (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    331101 5cx1:I (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    331102 5cx1:J (1.7476) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    331103 5cx1:J (1.7476) BS02 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331104 5cx1:J (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331105 5cx1:K (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    331106 5cx1:K (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    331107 5cx1:L (1.7476) BS01 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331108 5cx1:L (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    331109 5cx1:L (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331110 5cx1:M (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    331111 5cx1:M (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    331112 5cx1:N (1.7476) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    331113 5cx1:N (1.7476) BS02 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331114 5cx1:N (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331115 5cx1:O (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    331116 5cx1:O (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    331117 5cx1:P (1.7476) BS01 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331118 5cx1:P (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    331119 5cx1:P (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    331120 5cx3:A (2.3) BS01 peptide ? GO:0000045 ... Q9H492 27246247
    331121 5cx3:B (2.3) BS01 peptide ? GO:0000045 ... Q9H492 27246247
    331122 5cx3:C (2.3) BS01 peptide ? GO:0000045 ... Q9H492 27246247
    331123 5cx3:D (2.3) BS01 peptide ? GO:0000045 ... Q9H492 27246247
    331124 5cx6:A (2.1) BS01 MG ? N/A Q6A562 26625123
    331125 5cx6:A (2.1) BS02 CDP ? N/A Q6A562 26625123
    331126 5cx6:B (2.1) BS01 CDP ? N/A Q6A562 26625123
    331127 5cx7:A (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331128 5cx7:B (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331129 5cx7:C (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331130 5cx7:D (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331131 5cx7:E (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331132 5cx7:F (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331133 5cx7:G (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331134 5cx7:H (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331135 5cx7:H (1.97) BS02 MG 2.5.1.- N/A Q8ZNR5 27446048
    331136 5cx7:I (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331137 5cx7:J (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331138 5cx7:K (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331139 5cx7:L (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331140 5cx7:M (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331141 5cx7:N (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331142 5cx7:O (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331143 5cx7:P (1.97) BS01 HEM 2.5.1.- N/A Q8ZNR5 27446048
    331144 5cx7:P (1.97) BS02 MG 2.5.1.- N/A Q8ZNR5 27446048
    331145 5cx8:A (2.4) BS01 3DO ? GO:0009279 ... F5H948 26441291
    331146 5cx8:A (2.4) BS02 TG6 ? GO:0009279 ... F5H948 26441291
    331147 5cx8:A (2.4) BS03 RP3 ? GO:0009279 ... F5H948 26441291
    331148 5cx8:B (2.4) BS01 RP3 ? GO:0009279 ... F5H948 26441291
    331149 5cx9:A (1.732) BS01 551 2.7.11.1 GO:0004672 ... P68400 28495381
    331150 5cx9:A (1.732) BS02 551 2.7.11.1 GO:0004672 ... P68400 28495381
    331151 5cx9:A (1.732) BS03 551 2.7.11.1 GO:0004672 ... P68400 28495381
    331152 5cx9:B (1.732) BS01 551 2.7.11.1 GO:0004672 ... P68400 28495381
    331153 5cx9:B (1.732) BS02 551 2.7.11.1 GO:0004672 ... P68400 28495381
    331154 5cxa:A (1.3) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 27996256
    331155 5cxa:A (1.3) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 27996256
    331156 5cxa:A (1.3) BS03 CA 3.4.24.65 GO:0004222 ... P39900 27996256
    331157 5cxa:A (1.3) BS04 CA 3.4.24.65 GO:0004222 ... P39900 27996256
    331158 5cxa:A (1.3) BS05 CA 3.4.24.65 GO:0004222 ... P39900 27996256
    331159 5cxa:A (1.3) BS06 55L 3.4.24.65 GO:0004222 ... P39900 27996256
    331160 5cxh:A (1.9) BS01 55M 2.7.10.2 GO:0004672 ... P43405 26320624 MOAD: ic50=5nM
    BindingDB: IC50=132nM
    331161 5cxi:A (2.0) BS01 5TW ? GO:0000976 ... P96856 26858250 MOAD: Kd=280nM
    331162 5cxi:B (2.0) BS01 5TW ? GO:0000976 ... P96856 26858250 MOAD: Kd=280nM
    331163 5cxj:A (2.38) BS01 56T 3.5.1.88 GO:0042586 ... Q5H3Z2 N/A
    331164 5cxk:A (1.9) BS01 ZN 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652
    331165 5cxk:A (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    331166 5cxk:B (1.9) BS01 ZN 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652
    331167 5cxk:B (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    331168 5cxk:C (1.9) BS01 ZN 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652
    331169 5cxk:C (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    331170 5cxk:D (1.9) BS01 ZN 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652
    331171 5cxk:D (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    331172 5cxk:E (1.9) BS01 ZN 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652
    331173 5cxk:F (1.9) BS01 ZN 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652
    331174 5cxk:G (1.9) BS01 ZN 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652
    331175 5cxk:G (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    331176 5cxk:H (1.9) BS01 ZN 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652
    331177 5cxk:H (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    331178 5cxl:A (1.45) BS01 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331179 5cxl:A (1.45) BS02 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331180 5cxl:A (1.45) BS03 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331181 5cxl:A (1.45) BS04 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331182 5cxl:A (1.45) BS05 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331183 5cxl:A (1.45) BS06 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331184 5cxl:A (1.45) BS07 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331185 5cxl:A (1.45) BS08 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331186 5cxl:B (1.45) BS01 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331187 5cxl:B (1.45) BS02 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331188 5cxl:B (1.45) BS03 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331189 5cxl:B (1.45) BS04 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331190 5cxl:B (1.45) BS05 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331191 5cxl:B (1.45) BS06 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331192 5cxl:B (1.45) BS07 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331193 5cxl:B (1.45) BS08 CA 4.6.1.1 GO:0005509 ... P0DKX7 27058787
    331194 5cxm:A (1.7) BS01 FES ? GO:0016020 ... P74174 27663073
    331195 5cxm:B (1.7) BS01 FES ? GO:0016020 ... P74174 27663073
    331196 5cxm:C (1.7) BS01 FES ? GO:0016020 ... P74174 27663073
    331197 5cxm:D (1.7) BS01 FES ? GO:0016020 ... P74174 27663073
    331198 5cxr:A (2.002) BS01 MN 3.1.-.- GO:0003723 ... M9QLS3 26870381
    331199 5cxr:A (2.002) BS02 MN 3.1.-.- GO:0003723 ... M9QLS3 26870381
    331200 5cxr:A (2.002) BS03 BYZ 3.1.-.- GO:0003723 ... M9QLS3 26870381

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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