SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    33001 1mey:C (2.2) BS05 ZN N/A N/A N/A 8901872
    33002 1mey:C (2.2) BS06 ZN N/A N/A N/A 8901872
    33003 1mey:F (2.2) BS01 dna N/A N/A N/A 8901872
    33004 1mey:F (2.2) BS02 dna N/A N/A N/A 8901872
    33005 1mey:F (2.2) BS03 ZN N/A N/A N/A 8901872
    33006 1mey:F (2.2) BS04 ZN N/A N/A N/A 8901872
    33007 1mey:F (2.2) BS05 ZN N/A N/A N/A 8901872
    33008 1mez:A (2.4) BS01 MG 6.3.4.4 GO:0000166 ... P28650 12186864
    33009 1mez:A (2.4) BS02 SO4 6.3.4.4 GO:0000166 ... P28650 12186864
    33010 1mez:A (2.4) BS03 GDP 6.3.4.4 GO:0000166 ... P28650 12186864
    33011 1mez:A (2.4) BS04 2SA 6.3.4.4 GO:0000166 ... P28650 12186864
    33012 1mf0:A (2.5) BS01 MG 6.3.4.4 GO:0000166 ... P28650 12186864
    33013 1mf0:A (2.5) BS02 PO4 6.3.4.4 GO:0000166 ... P28650 12186864
    33014 1mf0:A (2.5) BS03 AMP 6.3.4.4 GO:0000166 ... P28650 12186864
    33015 1mf0:A (2.5) BS04 GDP 6.3.4.4 GO:0000166 ... P28650 12186864
    33016 1mf1:A (2.7) BS01 AMP 6.3.4.4 GO:0000166 ... P28650 12186864
    33017 1mf4:A (1.9) BS01 peptide 3.1.1.4 GO:0004623 ... P60045 14529280
    33018 1mf4:A (1.9) BS02 CA 3.1.1.4 GO:0004623 ... P60045 14529280
    33019 1mf8:A (3.1) BS01 peptide 3.1.3.16 GO:0016787 ... Q08209 12357034
    33020 1mf8:B (3.1) BS01 CA 3.1.3.16 GO:0004721 ... P63098 12357034
    33021 1mf8:B (3.1) BS02 CA 3.1.3.16 GO:0004721 ... P63098 12357034
    33022 1mf8:B (3.1) BS03 CA 3.1.3.16 GO:0004721 ... P63098 12357034
    33023 1mf8:B (3.1) BS04 CA 3.1.3.16 GO:0004721 ... P63098 12357034
    33024 1mf8:C (3.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 12357034
    33025 1mfa:L (1.7) BS01 ABE N/A N/A N/A 7517550
    33026 1mfb:H (2.1) BS01 RAM N/A N/A N/A 7689495
    33027 1mfb:H (2.1) BS02 ABE N/A N/A N/A 7689495
    33028 1mfb:L (2.1) BS01 RAM N/A N/A N/A 7689495
    33029 1mfb:L (2.1) BS02 ABE N/A N/A N/A 7689495
    33030 1mfc:H (2.1) BS01 RAM N/A N/A N/A 7689495
    33031 1mfc:H (2.1) BS02 ABE N/A N/A N/A 7689495
    33032 1mfc:L (2.1) BS01 ABE N/A N/A N/A 7689495
    33033 1mfd:H (2.1) BS01 MMA N/A N/A N/A 8172893
    33034 1mfd:H (2.1) BS02 ABE N/A N/A N/A 8172893
    33035 1mfd:L (2.1) BS01 ABE N/A N/A N/A 8172893
    33036 1mfe:H (2.0) BS01 ABE N/A N/A N/A 1713710
    33037 1mfe:L (2.0) BS01 ABE N/A N/A N/A 1713710
    33038 1mfg:A (1.25) BS01 peptide ? N/A Q96RT1 12444095
    33039 1mfi:A (1.8) BS01 FHC 5.3.2.1
    5.3.3.12
    GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    33040 1mfi:A (1.8) BS02 FHC 5.3.2.1
    5.3.3.12
    GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    33041 1mfi:B (1.8) BS01 FHC 5.3.2.1
    5.3.3.12
    GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    33042 1mfi:B (1.8) BS02 FHC 5.3.2.1
    5.3.3.12
    GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    33043 1mfi:C (1.8) BS01 FHC 5.3.2.1
    5.3.3.12
    GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    33044 1mfi:C (1.8) BS02 FHC 5.3.2.1
    5.3.3.12
    GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    33045 1mfl:A (1.88) BS01 peptide ? N/A Q96RT1 12444095
    33046 1mfm:A (1.02) BS01 ZN 1.15.1.1 GO:0000303 ... P00441 10329151
    33047 1mfm:A (1.02) BS02 CU 1.15.1.1 GO:0000303 ... P00441 10329151
    33048 1mfm:A (1.02) BS03 CD 1.15.1.1 GO:0000303 ... P00441 10329151
    33049 1mfm:A (1.02) BS04 CD 1.15.1.1 GO:0000303 ... P00441 10329151
    33050 1mfm:A (1.02) BS05 CD 1.15.1.1 GO:0000303 ... P00441 10329151
    33051 1mfp:A (2.33) BS01 NAD 1.3.1.9 GO:0004318 ... P0AEK4 12699381
    33052 1mfp:A (2.33) BS02 IDN 1.3.1.9 GO:0004318 ... P0AEK4 12699381 MOAD: ic50=0.07uM
    BindingDB: IC50=70nM
    33053 1mfp:B (2.33) BS01 NAD 1.3.1.9 GO:0004318 ... P0AEK4 12699381
    33054 1mfp:B (2.33) BS02 IDN 1.3.1.9 GO:0004318 ... P0AEK4 12699381 MOAD: ic50=0.07uM
    BindingDB: IC50=70nM
    33055 1mfq:B (3.1) BS01 rna ? GO:0006614 ... P09132 12244299
    33056 1mfq:C (3.1) BS01 rna 3.6.5.4 GO:0003924 ... P61011 12244299
    33057 1mfr:A (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33058 1mfr:A (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33059 1mfr:B (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33060 1mfr:B (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33061 1mfr:C (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33062 1mfr:C (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33063 1mfr:D (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33064 1mfr:D (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33065 1mfr:E (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33066 1mfr:E (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33067 1mfr:F (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33068 1mfr:F (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33069 1mfr:G (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33070 1mfr:G (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33071 1mfr:H (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33072 1mfr:H (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33073 1mfr:I (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33074 1mfr:I (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33075 1mfr:J (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33076 1mfr:J (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33077 1mfr:K (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33078 1mfr:K (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33079 1mfr:L (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33080 1mfr:L (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33081 1mfr:M (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33082 1mfr:M (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33083 1mfr:N (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33084 1mfr:N (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33085 1mfr:O (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33086 1mfr:O (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33087 1mfr:P (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33088 1mfr:P (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33089 1mfr:Q (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33090 1mfr:Q (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33091 1mfr:R (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33092 1mfr:R (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33093 1mfr:S (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33094 1mfr:S (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33095 1mfr:T (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33096 1mfr:T (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33097 1mfr:U (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33098 1mfr:U (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33099 1mfr:V (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33100 1mfr:V (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33101 1mfr:W (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33102 1mfr:W (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33103 1mfr:X (2.8) BS01 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33104 1mfr:X (2.8) BS02 MG 1.16.3.1 GO:0004322 ... P07798 10439069
    33105 1mfs:A (-1.00) BS01 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P35962 9641983
    33106 1mfs:A (-1.00) BS02 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P35962 9641983
    33107 1mft:A (2.5) BS01 ZN N/A GO:0016491 ... N/A 15713492
    33108 1mft:B (2.5) BS01 ZN N/A GO:0016491 ... N/A 15713492
    33109 1mfu:A (2.0) BS01 GLC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33110 1mfu:A (2.0) BS02 GLC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33111 1mfu:A (2.0) BS03 AGL 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33112 1mfu:A (2.0) BS04 GLC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33113 1mfu:A (2.0) BS05 AGL 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33114 1mfu:A (2.0) BS06 GLC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33115 1mfu:A (2.0) BS07 GLC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33116 1mfu:A (2.0) BS08 AGL 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33117 1mfu:A (2.0) BS09 HMC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33118 1mfu:A (2.0) BS10 HMC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33119 1mfu:A (2.0) BS11 GLC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33120 1mfu:A (2.0) BS12 CA 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33121 1mfv:A (2.0) BS01 GLC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33122 1mfv:A (2.0) BS02 AGL 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33123 1mfv:A (2.0) BS03 GLC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33124 1mfv:A (2.0) BS04 AGL 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33125 1mfv:A (2.0) BS05 GLC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33126 1mfv:A (2.0) BS06 AGL 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33127 1mfv:A (2.0) BS07 HMC 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33128 1mfv:A (2.0) BS08 CA 3.2.1.1 GO:0003824 ... P0DUB6 12527308
    33129 1mfz:A (2.8) BS01 GDX 1.1.1.132 GO:0006970 ... P11759 12705829
    33130 1mfz:A (2.8) BS02 GDX 1.1.1.132 GO:0006970 ... P11759 12705829
    33131 1mfz:B (2.8) BS01 GDX 1.1.1.132 GO:0006970 ... P11759 12705829
    33132 1mfz:B (2.8) BS02 GDX 1.1.1.132 GO:0006970 ... P11759 12705829
    33133 1mfz:C (2.8) BS01 GDX 1.1.1.132 GO:0006970 ... P11759 12705829
    33134 1mfz:C (2.8) BS02 GDX 1.1.1.132 GO:0006970 ... P11759 12705829
    33135 1mfz:D (2.8) BS01 GDX 1.1.1.132 GO:0006970 ... P11759 12705829
    33136 1mfz:D (2.8) BS02 GDX 1.1.1.132 GO:0006970 ... P11759 12705829
    33137 1mg0:A (1.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33138 1mg0:A (1.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33139 1mg0:A (1.8) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 12501206
    33140 1mg0:A (1.8) BS04 DFB 1.1.1.1 GO:0004022 ... P00327 12501206
    33141 1mg0:B (1.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33142 1mg0:B (1.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33143 1mg0:B (1.8) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 12501206
    33144 1mg0:B (1.8) BS04 DFB 1.1.1.1 GO:0004022 ... P00327 12501206
    33145 1mg0:C (1.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33146 1mg0:C (1.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33147 1mg0:C (1.8) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 12501206
    33148 1mg0:C (1.8) BS04 DFB 1.1.1.1 GO:0004022 ... P00327 12501206
    33149 1mg0:D (1.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33150 1mg0:D (1.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33151 1mg0:D (1.8) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 12501206
    33152 1mg0:D (1.8) BS04 DFB 1.1.1.1 GO:0004022 ... P00327 12501206
    33153 1mg1:A (2.5) BS01 GLC ? GO:0005515 ... P0AEX9 10200260
    33154 1mg1:A (2.5) BS02 GLC ? GO:0005515 ... P0AEX9 10200260
    33155 1mg2:C (2.25) BS01 CU ? GO:0005507 ... P22364 12437349
    33156 1mg2:D (2.25) BS01 HEC ? GO:0005506 ... P29899 12437349
    33157 1mg2:G (2.25) BS01 CU ? GO:0005507 ... P22364 12437349
    33158 1mg2:H (2.25) BS01 HEC ? GO:0005506 ... P29899 12437349
    33159 1mg2:K (2.25) BS01 CU ? GO:0005507 ... P22364 12437349
    33160 1mg2:L (2.25) BS01 HEC ? GO:0005506 ... P29899 12437349
    33161 1mg2:O (2.25) BS01 CU ? GO:0005507 ... P22364 12437349
    33162 1mg2:P (2.25) BS01 HEC ? GO:0005506 ... P29899 12437349
    33163 1mg3:C (2.4) BS01 CU ? GO:0005507 ... P22364 12437349
    33164 1mg3:D (2.4) BS01 HEC ? GO:0005506 ... P29899 12437349
    33165 1mg3:G (2.4) BS01 CU ? GO:0005507 ... P22364 12437349
    33166 1mg3:H (2.4) BS01 HEC ? GO:0005506 ... P29899 12437349
    33167 1mg3:K (2.4) BS01 CU ? GO:0005507 ... P22364 12437349
    33168 1mg3:L (2.4) BS01 HEC ? GO:0005506 ... P29899 12437349
    33169 1mg3:O (2.4) BS01 CU ? GO:0005507 ... P22364 12437349
    33170 1mg3:P (2.4) BS01 HEC ? GO:0005506 ... P29899 12437349
    33171 1mg5:A (1.63) BS01 ACT 1.1.1.1 GO:0004022 ... P00334 15581900
    33172 1mg5:A (1.63) BS02 NAI 1.1.1.1 GO:0004022 ... P00334 15581900
    33173 1mg5:B (1.63) BS01 ACT 1.1.1.1 GO:0004022 ... P00334 15581900
    33174 1mg5:B (1.63) BS02 NAI 1.1.1.1 GO:0004022 ... P00334 15581900
    33175 1mgn:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 8307983
    33176 1mgo:A (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33177 1mgo:A (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33178 1mgo:A (1.2) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 12501206
    33179 1mgo:B (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33180 1mgo:B (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 12501206
    33181 1mgo:B (1.2) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 12501206
    33182 1mgo:B (1.2) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 12501206 MOAD: Ki=51uM
    33183 1mgo:B (1.2) BS05 PFB 1.1.1.1 GO:0004022 ... P00327 12501206 MOAD: Ki=51uM
    33184 1mgv:A (2.1) BS01 PLP 2.6.1.62 GO:0004015 ... P12995 12379100
    33185 1mgv:B (2.1) BS01 PLP 2.6.1.62 GO:0004015 ... P12995 12379100
    33186 1mgy:A (2.0) BS01 BR ? GO:0005216 ... P02945 12829500
    33187 1mgy:A (2.0) BS02 BR ? GO:0005216 ... P02945 12829500
    33188 1mgy:A (2.0) BS03 RET ? GO:0005216 ... P02945 12829500
    33189 1mh1:A (1.38) BS01 MG 3.6.5.2 GO:0000242 ... P63000 9033596
    33190 1mh1:A (1.38) BS02 GNP 3.6.5.2 GO:0000242 ... P63000 9033596
    33191 1mh2:A (2.7) BS01 ZN 3.1.1.4 GO:0004623 ... P60043 N/A
    33192 1mh5:A (2.1) BS01 HAL ? GO:0002250 ... P01837 12948492
    33193 1mh5:B (2.1) BS01 HAL ? N/A P01863 12948492 MOAD: Kd=0.61nM
    33194 1mh5:H (2.1) BS01 HAL ? N/A P01863 12948492 MOAD: Kd=0.61nM
    33195 1mh5:L (2.1) BS01 HAL ? GO:0002250 ... P01837 12948492
    33196 1mh9:A (1.8) BS01 PO4 3.1.3.- GO:0008253 ... Q9NPB1 12352955
    33197 1mh9:A (1.8) BS02 MG 3.1.3.- GO:0008253 ... Q9NPB1 12352955
    33198 1mhc:A (2.1) BS01 peptide ? N/A Q31093 7664344
    33199 1mhc:D (2.1) BS01 peptide ? N/A Q31093 7664344
    33200 1mhd:A (2.8) BS01 dna ? GO:0005667 ... P84022 9741623

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).