SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    34401 1mxr:B (1.42) BS01 FE 1.17.4.1 GO:0004748 ... P69924 12624184
    34402 1mxr:B (1.42) BS02 FE 1.17.4.1 GO:0004748 ... P69924 12624184
    34403 1mxs:A (2.2) BS01 SO4 4.1.2.14 GO:0008675 ... P00885 12876349
    34404 1mxt:A (0.95) BS01 FAE 1.1.3.6
    5.3.3.1
    GO:0004769 ... P12676 12595270
    34405 1mxt:A (0.95) BS02 OXY 1.1.3.6
    5.3.3.1
    GO:0004769 ... P12676 12595270
    34406 1mxu:A (1.8) BS01 ZN ? GO:0015276 ... P19491 12731861
    34407 1mxu:A (1.8) BS02 BWD ? GO:0015276 ... P19491 12731861 MOAD: ic50=4uM
    BindingDB: Ki=61nM
    34408 1mxu:B (1.8) BS01 ZN ? GO:0015276 ... P19491 12731861
    34409 1mxu:B (1.8) BS02 ZN ? GO:0015276 ... P19491 12731861
    34410 1mxu:B (1.8) BS03 BWD ? GO:0015276 ... P19491 12731861 MOAD: ic50=4uM
    BindingDB: Ki=61nM
    34411 1mxu:C (1.8) BS01 ZN ? GO:0015276 ... P19491 12731861
    34412 1mxu:C (1.8) BS02 BWD ? GO:0015276 ... P19491 12731861 MOAD: ic50=4uM
    BindingDB: Ki=61nM
    34413 1mxv:A (1.95) BS01 ZN ? GO:0015276 ... P19491 12731861
    34414 1mxv:B (1.95) BS01 ZN ? GO:0015276 ... P19491 12731861
    34415 1mxv:B (1.95) BS02 ZN ? GO:0015276 ... P19491 12731861
    34416 1mxv:C (1.95) BS01 ZN ? GO:0015276 ... P19491 12731861
    34417 1mxw:A (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34418 1mxw:B (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34419 1mxw:B (1.9) BS02 ZN ? GO:0015276 ... P19491 12731861
    34420 1mxw:C (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34421 1mxx:A (2.0) BS01 ZN ? GO:0015276 ... P19491 12731861
    34422 1mxx:B (2.0) BS01 ZN ? GO:0015276 ... P19491 12731861
    34423 1mxx:B (2.0) BS02 ZN ? GO:0015276 ... P19491 12731861
    34424 1mxy:A (1.95) BS01 ZN ? GO:0015276 ... P19491 12731861
    34425 1mxy:B (1.95) BS01 ZN ? GO:0015276 ... P19491 12731861
    34426 1mxy:B (1.95) BS02 ZN ? GO:0015276 ... P19491 12731861
    34427 1mxz:A (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34428 1mxz:B (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34429 1mxz:B (1.9) BS02 ZN ? GO:0015276 ... P19491 12731861
    34430 1mxz:C (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34431 1my0:A (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34432 1my0:B (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34433 1my0:B (1.9) BS02 ZN ? GO:0015276 ... P19491 12731861
    34434 1my0:C (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34435 1my1:A (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34436 1my1:B (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34437 1my1:B (1.9) BS02 ZN ? GO:0015276 ... P19491 12731861
    34438 1my1:C (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34439 1my2:A (1.8) BS01 ZN ? GO:0015276 ... P19491 12731861
    34440 1my2:A (1.8) BS02 AMQ ? GO:0015276 ... P19491 12731861 BindingDB: Ki=17nM
    34441 1my2:B (1.8) BS01 ZN ? GO:0015276 ... P19491 12731861
    34442 1my2:B (1.8) BS02 ZN ? GO:0015276 ... P19491 12731861
    34443 1my2:B (1.8) BS03 AMQ ? GO:0015276 ... P19491 12731861 BindingDB: Ki=17nM
    34444 1my2:C (1.8) BS01 ZN ? GO:0015276 ... P19491 12731861
    34445 1my2:C (1.8) BS02 AMQ ? GO:0015276 ... P19491 12731861 BindingDB: Ki=17nM
    34446 1my3:A (1.75) BS01 ZN ? GO:0015276 ... P19491 12731861
    34447 1my3:A (1.75) BS02 BWD ? GO:0015276 ... P19491 12731861 BindingDB: Ki=61nM
    34448 1my3:B (1.75) BS01 ZN ? GO:0015276 ... P19491 12731861
    34449 1my3:B (1.75) BS02 ZN ? GO:0015276 ... P19491 12731861
    34450 1my3:B (1.75) BS03 BWD ? GO:0015276 ... P19491 12731861 BindingDB: Ki=61nM
    34451 1my3:C (1.75) BS01 BWD ? GO:0015276 ... P19491 12731861 BindingDB: Ki=61nM
    34452 1my4:A (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34453 1my4:A (1.9) BS02 IWD ? GO:0015276 ... P19491 12731861 BindingDB: Ki=105nM
    34454 1my4:B (1.9) BS01 ZN ? GO:0015276 ... P19491 12731861
    34455 1my4:B (1.9) BS02 ZN ? GO:0015276 ... P19491 12731861
    34456 1my4:B (1.9) BS03 IWD ? GO:0015276 ... P19491 12731861 BindingDB: Ki=105nM
    34457 1my4:C (1.9) BS01 IWD ? GO:0015276 ... P19491 12731861 BindingDB: Ki=105nM
    34458 1my6:A (1.6) BS01 FE 1.15.1.1 GO:0004784 ... Q8DIR2 12827458
    34459 1my6:B (1.6) BS01 FE 1.15.1.1 GO:0004784 ... Q8DIR2 12827458
    34460 1my8:A (1.72) BS01 SM3 3.5.2.6 GO:0008800 ... P00811 12526668 MOAD: Ki=0.035uM
    34461 1my8:B (1.72) BS01 SM3 3.5.2.6 GO:0008800 ... P00811 12526668 MOAD: Ki=0.035uM
    34462 1myf:A (-1.00) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 7966330
    34463 1myg:A (1.75) BS01 SO4 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1390659
    34464 1myg:A (1.75) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1390659
    34465 1myg:B (1.75) BS01 SO4 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1390659
    34466 1myg:B (1.75) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1390659
    34467 1myh:A (1.9) BS01 SO4 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1390659
    34468 1myh:A (1.9) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1390659
    34469 1myh:B (1.9) BS01 SO4 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1390659
    34470 1myh:B (1.9) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1390659
    34471 1myi:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1390659
    34472 1myi:B (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1390659
    34473 1myj:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1905570
    34474 1myj:B (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P02189 1905570
    34475 1mym:A (1.7) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 8312263
    34476 1myp:A (3.0) BS01 HEM 1.11.2.2 GO:0004601 ... P05164 1320128
    34477 1myp:B (3.0) BS01 HEM 1.11.2.2 GO:0004601 ... P05164 1320128
    34478 1myp:C (3.0) BS01 CA 1.11.2.2 GO:0004601 ... P05164 1320128
    34479 1myp:C (3.0) BS02 HEM 1.11.2.2 GO:0004601 ... P05164 1320128
    34480 1myp:D (3.0) BS01 CA 1.11.2.2 GO:0004601 ... P05164 1320128
    34481 1myp:D (3.0) BS02 HEM 1.11.2.2 GO:0004601 ... P05164 1320128
    34482 1myr:A (1.64) BS01 ZN 3.2.1.147 GO:0004553 ... P29736 9195886
    34483 1myt:A (1.74) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02205 15299440
    34484 1myz:A (1.6) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 12847289
    34485 1mz0:A (1.6) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 12847289
    34486 1mz4:A (1.8) BS01 BCT ? GO:0005506 ... P0A386 12881497
    34487 1mz4:A (1.8) BS02 HEC ? GO:0005506 ... P0A386 12881497
    34488 1mz6:A (2.9) BS01 DAN 3.2.1.18 GO:0004308 ... O44049 10619840
    34489 1mz8:B (2.0) BS01 ZN 3.1.-.- GO:0004519 ... Q47112 12441392
    34490 1mz8:B (2.0) BS02 PO4 3.1.-.- GO:0004519 ... Q47112 12441392
    34491 1mz8:D (2.0) BS01 ZN 3.1.-.- GO:0004519 ... Q47112 12441392
    34492 1mz9:A (1.7) BS01 VDY ? N/A Q9R0G6 12426368
    34493 1mz9:A (1.7) BS02 VDY ? N/A Q9R0G6 12426368
    34494 1mz9:B (1.7) BS01 VDY ? N/A Q9R0G6 12426368
    34495 1mz9:B (1.7) BS02 VDY ? N/A Q9R0G6 12426368
    34496 1mz9:C (1.7) BS01 VDY ? N/A Q9R0G6 12426368
    34497 1mz9:D (1.7) BS01 VDY ? N/A Q9R0G6 12426368
    34498 1mz9:D (1.7) BS02 VDY ? N/A Q9R0G6 12426368
    34499 1mz9:E (1.7) BS01 VDY ? N/A Q9R0G6 12426368
    34500 1mz9:E (1.7) BS02 VDY ? N/A Q9R0G6 12426368
    34501 1mzb:A (1.8) BS01 ZN ? GO:0000976 ... Q03456 12581348
    34502 1mzb:A (1.8) BS02 ZN ? GO:0000976 ... Q03456 12581348
    34503 1mzb:A (1.8) BS03 ZN ? GO:0000976 ... Q03456 12581348
    34504 1mzc:A (2.0) BS01 GLC 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 12825937
    34505 1mzc:A (2.0) BS02 FPP 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 12825937 BindingDB: Kd=2.0nM
    34506 1mzc:B (2.0) BS01 GLC 2.5.1.58 GO:0003824 ... P49356 12825937
    34507 1mzc:B (2.0) BS02 FRU 2.5.1.58 GO:0003824 ... P49356 12825937
    34508 1mzc:B (2.0) BS03 ZN 2.5.1.58 GO:0003824 ... P49356 12825937
    34509 1mzc:B (2.0) BS04 FPP 2.5.1.58 GO:0003824 ... P49356 12825937
    34510 1mzc:B (2.0) BS05 BNE 2.5.1.58 GO:0003824 ... P49356 12825937 MOAD: ic50=0.06nM
    BindingDB: IC50=0.06nM
    34511 1mze:A (2.2) BS01 FE2 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12432100
    34512 1mzf:A (2.4) BS01 FE2 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12432100
    34513 1mzf:A (2.4) BS02 AKG 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12432100
    34514 1mzj:A (2.1) BS01 COA 2.3.1.180
    2.3.1.300
    GO:0004315 ... Q9F6D4 12429097
    34515 1mzj:B (2.1) BS01 COA 2.3.1.180
    2.3.1.300
    GO:0004315 ... Q9F6D4 12429097
    34516 1mzn:A (1.9) BS01 peptide ? GO:0003677 ... P19793 11981034
    34517 1mzn:A (1.9) BS02 BM6 ? GO:0003677 ... P19793 11981034
    34518 1mzn:C (1.9) BS01 peptide ? GO:0003677 ... P19793 11981034
    34519 1mzn:C (1.9) BS02 BM6 ? GO:0003677 ... P19793 11981034
    34520 1mzn:E (1.9) BS01 peptide ? GO:0003677 ... P19793 11981034
    34521 1mzn:E (1.9) BS02 BM6 ? GO:0003677 ... P19793 11981034
    34522 1mzn:G (1.9) BS01 peptide ? GO:0003677 ... P19793 11981034
    34523 1mzn:G (1.9) BS02 BM6 ? GO:0003677 ... P19793 11981034
    34524 1mzo:A (2.7) BS01 PYR 2.3.1.54 GO:0003824 ... P09373 12454503
    34525 1mzo:B (2.7) BS01 PYR 2.3.1.54 GO:0003824 ... P09373 12454503
    34526 1mzp:A (2.65) BS01 rna ? GO:0003723 ... P35024 12514741
    34527 1mzs:A (2.1) BS01 669 2.3.1.180 GO:0004315 ... P0A6R0 12502353 MOAD: ic50=7uM
    34528 1mzv:A (2.2) BS01 AMP 2.4.2.7 GO:0003999 ... O77103 14726202
    34529 1mzy:A (1.46) BS01 CU 1.7.2.1 GO:0005507 ... Q53239 N/A
    34530 1mzy:A (1.46) BS02 CU 1.7.2.1 GO:0005507 ... Q53239 N/A
    34531 1mzy:A (1.46) BS03 MG 1.7.2.1 GO:0005507 ... Q53239 N/A
    34532 1mzz:A (2.0) BS01 CU 1.7.2.1 GO:0005507 ... Q53239 N/A
    34533 1mzz:A (2.0) BS02 CU 1.7.2.1 GO:0005507 ... Q53239 N/A
    34534 1mzz:B (2.0) BS01 CU 1.7.2.1 GO:0005507 ... Q53239 N/A
    34535 1mzz:B (2.0) BS02 CU 1.7.2.1 GO:0005507 ... Q53239 N/A
    34536 1mzz:C (2.0) BS01 CU 1.7.2.1 GO:0005507 ... Q53239 N/A
    34537 1mzz:C (2.0) BS02 CU 1.7.2.1 GO:0005507 ... Q53239 N/A
    34538 1n03:A (20.0) BS01 ADP ? GO:0000150 ... P0A7G6 12575938
    34539 1n03:B (20.0) BS01 ADP ? GO:0000150 ... P0A7G6 12575938
    34540 1n03:C (20.0) BS01 ADP ? GO:0000150 ... P0A7G6 12575938
    34541 1n03:D (20.0) BS01 ADP ? GO:0000150 ... P0A7G6 12575938
    34542 1n03:E (20.0) BS01 ADP ? GO:0000150 ... P0A7G6 12575938
    34543 1n03:F (20.0) BS01 ADP ? GO:0000150 ... P0A7G6 12575938
    34544 1n03:G (20.0) BS01 ADP ? GO:0000150 ... P0A7G6 12575938
    34545 1n04:A (2.8) BS01 FUL ? GO:0005506 ... P02789 14501117
    34546 1n04:A (2.8) BS02 FE ? GO:0005506 ... P02789 14501117
    34547 1n04:A (2.8) BS03 FE ? GO:0005506 ... P02789 14501117
    34548 1n04:A (2.8) BS04 CO3 ? GO:0005506 ... P02789 14501117
    34549 1n04:A (2.8) BS05 CO3 ? GO:0005506 ... P02789 14501117
    34550 1n06:A (2.0) BS01 ADP 2.7.1.26 GO:0005739 ... O74866 12595258
    34551 1n06:B (2.0) BS01 ADP 2.7.1.26 GO:0005739 ... O74866 12595258
    34552 1n07:A (2.45) BS01 ADP 2.7.1.26 GO:0005739 ... O74866 12595258
    34553 1n07:A (2.45) BS02 FMN 2.7.1.26 GO:0005739 ... O74866 12595258
    34554 1n07:B (2.45) BS01 ADP 2.7.1.26 GO:0005739 ... O74866 12595258
    34555 1n07:B (2.45) BS02 FMN 2.7.1.26 GO:0005739 ... O74866 12595258
    34556 1n08:A (1.6) BS01 ADP 2.7.1.26 GO:0005739 ... O74866 12595258
    34557 1n08:B (1.6) BS01 ADP 2.7.1.26 GO:0005739 ... O74866 12595258
    34558 1n0h:A (2.8) BS01 MG 2.2.1.6 GO:0000287 ... P07342 14557277
    34559 1n0h:A (2.8) BS02 CIE 2.2.1.6 GO:0000287 ... P07342 14557277 BindingDB: Ki=3.3nM
    34560 1n0h:A (2.8) BS03 AYD 2.2.1.6 GO:0000287 ... P07342 14557277
    34561 1n0h:A (2.8) BS04 FAD 2.2.1.6 GO:0000287 ... P07342 14557277
    34562 1n0h:A (2.8) BS05 CIE 2.2.1.6 GO:0000287 ... P07342 14557277 BindingDB: Ki=3.3nM
    34563 1n0h:A (2.8) BS06 TPP 2.2.1.6 GO:0000287 ... P07342 14557277
    34564 1n0h:B (2.8) BS01 CIE 2.2.1.6 GO:0000287 ... P07342 14557277 BindingDB: Ki=3.3nM
    34565 1n0h:B (2.8) BS02 AYD 2.2.1.6 GO:0000287 ... P07342 14557277
    34566 1n0h:B (2.8) BS03 MG 2.2.1.6 GO:0000287 ... P07342 14557277
    34567 1n0h:B (2.8) BS04 CIE 2.2.1.6 GO:0000287 ... P07342 14557277 BindingDB: Ki=3.3nM
    34568 1n0h:B (2.8) BS05 TPP 2.2.1.6 GO:0000287 ... P07342 14557277
    34569 1n0h:B (2.8) BS06 FAD 2.2.1.6 GO:0000287 ... P07342 14557277
    34570 1n0j:A (2.2) BS01 MN 1.15.1.1 GO:0004784 ... P04179 1394426
    34571 1n0j:B (2.2) BS01 MN 1.15.1.1 GO:0004784 ... P04179 1394426
    34572 1n0n:A (1.82) BS01 MN 1.15.1.1 GO:0004784 ... P04179 N/A
    34573 1n0n:B (1.82) BS01 MN 1.15.1.1 GO:0004784 ... P04179 N/A
    34574 1n0q:B (1.26) BS01 TFA N/A N/A N/A 12461176
    34575 1n0s:A (2.0) BS01 FLU ? GO:0000302 ... P09464 12945055 MOAD: Kd=35.2nM
    34576 1n0s:B (2.0) BS01 FLU ? GO:0000302 ... P09464 12945055 MOAD: Kd=35.2nM
    34577 1n0t:A (2.1) BS01 AT1 ? GO:0015276 ... P19491 12519060 MOAD: ic50=12.2uM
    34578 1n0t:B (2.1) BS01 AT1 ? GO:0015276 ... P19491 12519060 MOAD: ic50=12.2uM
    34579 1n0t:C (2.1) BS01 AT1 ? GO:0015276 ... P19491 12519060 MOAD: ic50=12.2uM
    34580 1n0t:D (2.1) BS01 AT1 ? GO:0015276 ... P19491 12519060 MOAD: ic50=12.2uM
    34581 1n0u:A (2.12) BS01 SO1 3.6.5.- GO:0003746 ... P32324 12692531
    34582 1n0w:A (1.7) BS01 MG ? GO:0000150 ... Q06609 12442171
    34583 1n0x:H (1.8) BS01 peptide ? N/A P0DOX5 N/A
    34584 1n0x:H (1.8) BS02 peptide ? N/A P0DOX5 N/A
    34585 1n0x:K (1.8) BS01 peptide ? N/A P0DOX5 N/A
    34586 1n0x:L (1.8) BS01 peptide ? GO:0002250 ... P01834 N/A
    34587 1n0x:M (1.8) BS01 peptide ? GO:0002250 ... P01834 N/A
    34588 1n0z:A (-1.00) BS01 ZN ? N/A O95218 12657633
    34589 1n12:A (1.87) BS01 peptide ? GO:0005515 ... P08407 12437927
    34590 1n12:C (1.87) BS01 peptide ? GO:0005515 ... P08407 12437927
    34591 1n13:A (1.4) BS01 AG2 4.1.1.19 GO:0006520 ... Q57764 12623016
    34592 1n13:B (1.4) BS01 AG2 4.1.1.19 GO:0006520 ... Q57764 12623016
    34593 1n13:C (1.4) BS01 AG2 4.1.1.19 GO:0006520 ... Q57764 12623016
    34594 1n13:D (1.4) BS01 AG2 4.1.1.19 GO:0006520 ... Q57764 12623016
    34595 1n13:E (1.4) BS01 AG2 4.1.1.19 GO:0006520 ... Q57764 12623016
    34596 1n13:F (1.4) BS01 AG2 4.1.1.19 GO:0006520 ... Q57764 12623016
    34597 1n13:G (1.4) BS01 AG2 4.1.1.19 GO:0006520 ... Q57764 12623016
    34598 1n13:H (1.4) BS01 AG2 4.1.1.19 GO:0006520 ... Q57764 12623016
    34599 1n13:I (1.4) BS01 AG2 4.1.1.19 GO:0006520 ... Q57764 12623016
    34600 1n13:J (1.4) BS01 AG2 4.1.1.19 GO:0006520 ... Q57764 12623016

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).