SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    350201 5gqx:A (2.3) BS18 GLC 2.4.1.18 GO:0003824 ... B1WPM8 28193843
    350202 5gqx:A (2.3) BS19 GLC 2.4.1.18 GO:0003824 ... B1WPM8 28193843
    350203 5gqx:A (2.3) BS20 GLC 2.4.1.18 GO:0003824 ... B1WPM8 28193843
    350204 5gqx:A (2.3) BS21 GLC 2.4.1.18 GO:0003824 ... B1WPM8 28193843
    350205 5gqx:A (2.3) BS22 GLC 2.4.1.18 GO:0003824 ... B1WPM8 28193843
    350206 5gqy:A (2.0) BS01 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350207 5gqy:A (2.0) BS02 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350208 5gqy:A (2.0) BS03 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350209 5gqy:A (2.0) BS04 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350210 5gqy:A (2.0) BS05 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350211 5gqy:A (2.0) BS06 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350212 5gqy:A (2.0) BS07 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350213 5gqy:A (2.0) BS08 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350214 5gqy:A (2.0) BS09 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350215 5gqy:A (2.0) BS10 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350216 5gqy:A (2.0) BS11 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350217 5gqy:A (2.0) BS12 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350218 5gqy:A (2.0) BS13 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350219 5gqy:A (2.0) BS14 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350220 5gqy:A (2.0) BS15 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350221 5gqy:A (2.0) BS16 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350222 5gqy:A (2.0) BS17 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350223 5gr1:A (2.5) BS01 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350224 5gr1:A (2.5) BS02 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350225 5gr1:A (2.5) BS03 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350226 5gr1:A (2.5) BS04 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350227 5gr1:A (2.5) BS05 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350228 5gr1:A (2.5) BS06 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350229 5gr1:A (2.5) BS07 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350230 5gr1:A (2.5) BS08 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350231 5gr1:A (2.5) BS09 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350232 5gr1:A (2.5) BS10 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350233 5gr1:A (2.5) BS11 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350234 5gr1:A (2.5) BS12 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350235 5gr4:A (2.0) BS01 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350236 5gr4:A (2.0) BS02 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350237 5gr4:A (2.0) BS03 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350238 5gr4:A (2.0) BS04 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350239 5gr4:A (2.0) BS05 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350240 5gr4:A (2.0) BS06 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350241 5gr4:A (2.0) BS07 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350242 5gr4:A (2.0) BS08 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350243 5gr4:A (2.0) BS09 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350244 5gr4:A (2.0) BS10 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350245 5gr4:A (2.0) BS11 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350246 5gr4:A (2.0) BS12 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350247 5gr4:A (2.0) BS13 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350248 5gr4:A (2.0) BS14 GLC 2.4.1.18 GO:0003824 ... B1WPM8 N/A
    350249 5gr7:A (2.4) BS01 peptide ? N/A P01902 27903740
    350250 5gr8:A (2.587) BS01 peptide 2.7.11.1 N/A Q9SSL9 25475059
    350251 5gr8:D (2.587) BS01 peptide 2.7.11.1 N/A Q9SSL9 25475059
    350252 5gr9:B (2.767) BS01 peptide 2.7.11.1 N/A Q9FII5 27055373
    350253 5grb:A (2.803) BS01 AGS 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350254 5grb:A (2.803) BS02 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350255 5grb:B (2.803) BS01 AGS 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350256 5grb:B (2.803) BS02 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350257 5grb:C (2.803) BS01 AGS 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350258 5grb:C (2.803) BS02 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350259 5grb:D (2.803) BS01 AGS 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350260 5grb:D (2.803) BS02 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350261 5grb:E (2.803) BS01 AGS 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350262 5grb:E (2.803) BS02 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350263 5grb:F (2.803) BS01 AGS 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350264 5grb:F (2.803) BS02 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... B9VUU3 N/A
    350265 5grd:A (1.8) BS01 peptide ? N/A P04439 28698575
    350266 5gre:A (2.65) BS01 MG 1.1.1.41 GO:0000287 ... P50213 28098230
    350267 5gre:B (2.65) BS01 ADP 1.1.1.41 GO:0000287 ... P51553 28098230
    350268 5gre:B (2.65) BS02 MG 1.1.1.41 GO:0000287 ... P51553 28098230
    350269 5grf:B (2.5) BS01 ADP 1.1.1.41 GO:0000287 ... P51553 28098230
    350270 5grf:B (2.5) BS02 MG 1.1.1.41 GO:0000287 ... P51553 28098230
    350271 5grg:A (1.94) BS01 peptide ? N/A P04439 28698575
    350272 5grg:A (1.94) BS02 peptide ? N/A P04439 28698575
    350273 5grh:A (2.8) BS01 MG 1.1.1.41 GO:0000287 ... P50213 28098230
    350274 5gri:A (2.31) BS01 MG 1.1.1.41 GO:0000287 ... P50213 28098230
    350275 5gri:B (2.31) BS01 MG 1.1.1.41 GO:0000287 ... P51553 28098230
    350276 5grk:A (2.804) BS01 XAN ? N/A Q89XR0 28369586
    350277 5grk:B (2.804) BS01 XAN ? N/A Q89XR0 28369586
    350278 5grk:C (2.804) BS01 XAN ? N/A Q89XR0 28369586
    350279 5grk:D (2.804) BS01 XAN ? N/A Q89XR0 28369586
    350280 5grl:A (2.79) BS01 MG 1.1.1.41 GO:0000287 ... P50213 28098230
    350281 5grl:B (2.79) BS01 ADP 1.1.1.41 GO:0000287 ... P51553 28098230
    350282 5grl:B (2.79) BS02 MG 1.1.1.41 GO:0000287 ... P51553 28098230
    350283 5grm:A (1.55) BS01 1SY ? GO:0002218 ... F1M391 N/A
    350284 5grm:B (1.55) BS01 1SY ? GO:0002218 ... F1M391 N/A MOAD: Kd=0.12uM
    350285 5grn:A (1.77) BS01 748 2.7.10.1 GO:0004672 ... P16234 N/A BindingDB: IC50=132nM
    350286 5grq:A (1.584) BS01 ZN ? N/A Q9UER7 N/A
    350287 5grq:A (1.584) BS02 ZN ? N/A Q9UER7 N/A
    350288 5grq:B (1.584) BS01 peptide ? N/A Q9UER7 N/A
    350289 5grq:B (1.584) BS02 ZN ? N/A Q9UER7 N/A
    350290 5grq:B (1.584) BS03 ZN ? N/A Q9UER7 N/A
    350291 5grq:C (1.584) BS01 ZN 3.6.4.12 N/A P46100 N/A
    350292 5grr:A (1.45) BS01 ZN 2.7.-.- GO:0016772 ... A0A0R6L508 28000749
    350293 5grr:A (1.45) BS02 ZN 2.7.-.- GO:0016772 ... A0A0R6L508 28000749
    350294 5grr:A (1.45) BS03 ZN 2.7.-.- GO:0016772 ... A0A0R6L508 28000749
    350295 5grt:A (2.4) BS01 FAD 1.8.1.7 GO:0004362 ... P00390 9174360
    350296 5grt:A (2.4) BS02 TS4 1.8.1.7 GO:0004362 ... P00390 9174360
    350297 5gs4:A (2.4) BS01 peptide ? N/A P03372 29045135
    350298 5gs4:A (2.4) BS02 EST ? N/A P03372 29045135 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    350299 5gs8:A (1.59) BS01 SO4 3.5.2.6 GO:0008800 ... A0A0B6VPP7 28739781
    350300 5gs8:A (1.59) BS02 SO4 3.5.2.6 GO:0008800 ... A0A0B6VPP7 28739781
    350301 5gs8:A (1.59) BS03 SO4 3.5.2.6 GO:0008800 ... A0A0B6VPP7 28739781
    350302 5gs9:A (2.5) BS01 ARG ? GO:0005515 ... Q8WTX7 27648300 MOAD: Kd=5.5uM
    350303 5gs9:B (2.5) BS01 ARG ? GO:0005515 ... Q8WTX7 27648300 MOAD: Kd=5.5uM
    350304 5gs9:C (2.5) BS01 ARG ? GO:0005515 ... Q8WTX7 27648300 MOAD: Kd=5.5uM
    350305 5gs9:D (2.5) BS01 ARG ? GO:0005515 ... Q8WTX7 27648300 MOAD: Kd=5.5uM
    350306 5gsa:A (2.49) BS01 peptide ? N/A O75530 28135235
    350307 5gsa:A (2.49) BS02 73K ? N/A O75530 28135235 MOAD: Kd=82.5nM
    BindingDB: Kd=82nM, IC50=53.5nM
    350308 5gsa:B (2.49) BS01 peptide ? N/A O75530 28135235
    350309 5gsa:B (2.49) BS02 73K ? N/A O75530 28135235 MOAD: Kd=82.5nM
    BindingDB: Kd=82nM, IC50=53.5nM
    350310 5gsb:A (1.801) BS01 peptide ? N/A P01902 27903740
    350311 5gsd:A (2.3) BS01 peptide ? N/A P04439 28698575
    350312 5gse:A (3.14) BS01 dna ? GO:0000786 ... P68431 28408607
    350313 5gse:A (3.14) BS02 dna ? GO:0000786 ... P68431 28408607
    350314 5gse:B (3.14) BS01 dna ? GO:0000781 ... P62805 28408607
    350315 5gse:B (3.14) BS02 dna ? GO:0000781 ... P62805 28408607
    350316 5gse:C (3.14) BS01 dna ? GO:0000786 ... P04908 28408607
    350317 5gse:C (3.14) BS02 dna ? GO:0000786 ... P04908 28408607
    350318 5gse:D (3.14) BS01 dna ? GO:0000786 ... P06899 28408607
    350319 5gse:D (3.14) BS02 dna ? GO:0000786 ... P06899 28408607
    350320 5gse:E (3.14) BS01 dna ? GO:0000786 ... P68431 28408607
    350321 5gse:E (3.14) BS02 dna ? GO:0000786 ... P68431 28408607
    350322 5gse:F (3.14) BS01 dna ? GO:0000781 ... P62805 28408607
    350323 5gse:F (3.14) BS02 dna ? GO:0000781 ... P62805 28408607
    350324 5gse:G (3.14) BS01 dna ? GO:0000786 ... P04908 28408607
    350325 5gse:G (3.14) BS02 dna ? GO:0000786 ... P04908 28408607
    350326 5gse:H (3.14) BS01 dna ? GO:0000786 ... P06899 28408607
    350327 5gse:H (3.14) BS02 dna ? GO:0000786 ... P06899 28408607
    350328 5gse:K (3.14) BS01 dna ? GO:0000786 ... P68431 28408607
    350329 5gse:K (3.14) BS02 dna ? GO:0000786 ... P68431 28408607
    350330 5gse:L (3.14) BS01 dna ? GO:0000781 ... P62805 28408607
    350331 5gse:L (3.14) BS02 dna ? GO:0000781 ... P62805 28408607
    350332 5gse:M (3.14) BS01 dna ? GO:0000786 ... P04908 28408607
    350333 5gse:M (3.14) BS02 dna ? GO:0000786 ... P04908 28408607
    350334 5gse:N (3.14) BS01 dna ? GO:0000786 ... P06899 28408607
    350335 5gse:N (3.14) BS02 dna ? GO:0000786 ... P06899 28408607
    350336 5gse:O (3.14) BS01 dna ? GO:0000786 ... P68431 28408607
    350337 5gse:O (3.14) BS02 dna ? GO:0000786 ... P68431 28408607
    350338 5gse:P (3.14) BS01 dna ? GO:0000781 ... P62805 28408607
    350339 5gse:P (3.14) BS02 dna ? GO:0000781 ... P62805 28408607
    350340 5gsm:A (1.27) BS01 GCS 3.2.1.- GO:0004553 ... Q76HN4 N/A
    350341 5gsm:B (1.27) BS01 GCS 3.2.1.- GO:0004553 ... Q76HN4 N/A
    350342 5gsn:A (2.203) BS01 NAP 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    350343 5gsn:A (2.203) BS02 FAD 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    350344 5gsn:A (2.203) BS03 MMZ 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    350345 5gsn:B (2.203) BS01 NAP 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    350346 5gsn:B (2.203) BS02 FAD 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    350347 5gsn:C (2.203) BS01 NAP 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    350348 5gsn:C (2.203) BS02 FAD 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    350349 5gsn:C (2.203) BS03 MMZ 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    350350 5gsn:D (2.203) BS01 NAP 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    350351 5gsn:D (2.203) BS02 FAD 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    350352 5gso:A (2.6) BS01 5GI ? GO:0004197 ... E7E815 28461310
    350353 5gso:B (2.6) BS01 5GI ? GO:0004197 ... E7E815 28461310
    350354 5gso:C (2.6) BS01 5GI ? GO:0004197 ... E7E815 28461310
    350355 5gso:D (2.6) BS01 5GI ? GO:0004197 ... E7E815 28461310
    350356 5gso:E (2.6) BS01 5GI ? GO:0004197 ... E7E815 28461310
    350357 5gsp:A (1.8) BS01 3GP 4.6.1.24 GO:0001411 ... P00651 9546218
    350358 5gsq:A (1.85) BS01 BMA ? N/A P01857 28318221
    350359 5gsq:A (1.85) BS02 GAL ? N/A P01857 28318221
    350360 5gsq:B (1.85) BS01 BMA ? N/A P01857 28318221
    350361 5gsq:B (1.85) BS02 GAL ? N/A P01857 28318221
    350362 5gsq:C (1.85) BS01 GAL ? N/A P01857 28318221
    350363 5gsq:D (1.85) BS01 BMA ? N/A P01857 28318221
    350364 5gsr:A (2.198) BS01 peptide ? N/A P01902 27903740
    350365 5gsr:C (2.198) BS01 peptide ? N/A P01902 27903740
    350366 5gss:A (1.95) BS01 GSH 2.5.1.18 GO:0000302 ... P09211 9398518
    350367 5gss:B (1.95) BS01 GSH 2.5.1.18 GO:0000302 ... P09211 9398518
    350368 5gst:A (2.0) BS01 GDN 2.5.1.18 GO:0004364 ... P04905 8241147
    350369 5gst:B (2.0) BS01 GDN 2.5.1.18 GO:0004364 ... P04905 8241147
    350370 5gsu:A (3.1) BS01 dna ? GO:0000786 ... P68431 27992841
    350371 5gsu:A (3.1) BS02 dna ? GO:0000786 ... P68431 27992841
    350372 5gsu:B (3.1) BS01 dna ? GO:0000781 ... P62805 27992841
    350373 5gsu:B (3.1) BS02 dna ? GO:0000781 ... P62805 27992841
    350374 5gsu:C (3.1) BS01 dna ? GO:0000781 ... Q96QV6 27992841
    350375 5gsu:C (3.1) BS02 dna ? GO:0000781 ... Q96QV6 27992841
    350376 5gsu:D (3.1) BS01 dna ? GO:0000781 ... Q96A08 27992841
    350377 5gsu:D (3.1) BS02 dna ? GO:0000781 ... Q96A08 27992841
    350378 5gsu:E (3.1) BS01 dna ? GO:0000786 ... P68431 27992841
    350379 5gsu:E (3.1) BS02 dna ? GO:0000786 ... P68431 27992841
    350380 5gsu:F (3.1) BS01 dna ? GO:0000781 ... P62805 27992841
    350381 5gsu:F (3.1) BS02 dna ? GO:0000781 ... P62805 27992841
    350382 5gsu:G (3.1) BS01 dna ? GO:0000781 ... Q96QV6 27992841
    350383 5gsu:G (3.1) BS02 dna ? GO:0000781 ... Q96QV6 27992841
    350384 5gsu:H (3.1) BS01 dna ? GO:0000781 ... Q96A08 27992841
    350385 5gsu:H (3.1) BS02 dna ? GO:0000781 ... Q96A08 27992841
    350386 5gsv:A (1.996) BS01 peptide ? N/A P01902 27903740
    350387 5gsw:A (3.19) BS01 5GI ? GO:0004197 ... E7E815 28461310
    350388 5gsw:B (3.19) BS01 5GI ? GO:0004197 ... E7E815 28461310
    350389 5gsw:C (3.19) BS01 5GI ? GO:0004197 ... E7E815 28461310
    350390 5gsw:D (3.19) BS01 5GI ? GO:0004197 ... E7E815 28461310
    350391 5gsw:E (3.19) BS01 5GI ? GO:0004197 ... E7E815 28461310
    350392 5gsx:A (2.5) BS01 peptide ? N/A P01902 27903740
    350393 5gsx:D (2.5) BS01 peptide ? N/A P01902 27903740
    350394 5gsx:D (2.5) BS02 peptide ? N/A P01902 27903740
    350395 5gsz:A (2.72) BS01 ADP ? GO:0003777 ... Q99PT9 27690357
    350396 5gt0:A (2.82) BS01 dna ? GO:0000786 ... P68431 27992841
    350397 5gt0:A (2.82) BS02 dna ? GO:0000786 ... P68431 27992841
    350398 5gt0:B (2.82) BS01 dna ? GO:0000781 ... P62805 27992841
    350399 5gt0:B (2.82) BS02 dna ? GO:0000781 ... P62805 27992841
    350400 5gt0:C (2.82) BS01 dna ? GO:0000781 ... Q96QV6 27992841

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).