SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    351001 5gwe:C (2.0) BS02 GWM ? GO:0004497 ... Q8NSW2 28607077 MOAD: Kd=62uM
    351002 5gwe:D (2.0) BS01 HEM ? GO:0004497 ... Q8NSW2 28607077
    351003 5gwe:D (2.0) BS02 GWM ? GO:0004497 ... Q8NSW2 28607077 MOAD: Kd=62uM
    351004 5gwf:B (1.55) BS01 NGY ? GO:0005576 ... B9W5G6 28630155
    351005 5gwf:D (1.55) BS01 NGY ? GO:0005576 ... B9W5G6 28630155
    351006 5gwi:A (2.737) BS01 dna 5.6.2.2 GO:0003677 ... Q02880 28977631
    351007 5gwi:A (2.737) BS02 dna 5.6.2.2 GO:0003677 ... Q02880 28977631
    351008 5gwi:A (2.737) BS03 N2R 5.6.2.2 GO:0003677 ... Q02880 28977631
    351009 5gwi:A (2.737) BS04 N2N 5.6.2.2 GO:0003677 ... Q02880 28977631
    351010 5gwi:A (2.737) BS05 MG 5.6.2.2 GO:0003677 ... Q02880 28977631
    351011 5gwi:B (2.737) BS01 dna 5.6.2.2 GO:0003677 ... Q02880 28977631
    351012 5gwi:B (2.737) BS02 dna 5.6.2.2 GO:0003677 ... Q02880 28977631
    351013 5gwi:B (2.737) BS03 N2R 5.6.2.2 GO:0003677 ... Q02880 28977631
    351014 5gwi:B (2.737) BS04 MG 5.6.2.2 GO:0003677 ... Q02880 28977631
    351015 5gwi:B (2.737) BS05 N2N 5.6.2.2 GO:0003677 ... Q02880 28977631
    351016 5gwj:A (2.566) BS01 dna 5.6.2.2 GO:0003677 ... Q02880 28977631
    351017 5gwj:A (2.566) BS02 dna 5.6.2.2 GO:0003677 ... Q02880 28977631
    351018 5gwj:A (2.566) BS03 dna 5.6.2.2 GO:0003677 ... Q02880 28977631
    351019 5gwj:A (2.566) BS04 N2S 5.6.2.2 GO:0003677 ... Q02880 28977631
    351020 5gwj:A (2.566) BS05 N2W 5.6.2.2 GO:0003677 ... Q02880 28977631
    351021 5gwj:A (2.566) BS06 MG 5.6.2.2 GO:0003677 ... Q02880 28977631
    351022 5gwj:B (2.566) BS01 dna 5.6.2.2 GO:0003677 ... Q02880 28977631
    351023 5gwj:B (2.566) BS02 dna 5.6.2.2 GO:0003677 ... Q02880 28977631
    351024 5gwj:B (2.566) BS03 N2S 5.6.2.2 GO:0003677 ... Q02880 28977631
    351025 5gwj:B (2.566) BS04 N2W 5.6.2.2 GO:0003677 ... Q02880 28977631
    351026 5gwj:B (2.566) BS05 MG 5.6.2.2 GO:0003677 ... Q02880 28977631
    351027 5gwk:A (3.152) BS01 dna 5.6.2.2 GO:0003677 ... P11388 28977631
    351028 5gwk:A (3.152) BS02 dna 5.6.2.2 GO:0003677 ... P11388 28977631
    351029 5gwk:A (3.152) BS03 dna 5.6.2.2 GO:0003677 ... P11388 28977631
    351030 5gwk:A (3.152) BS04 MG 5.6.2.2 GO:0003677 ... P11388 28977631
    351031 5gwk:A (3.152) BS05 EVP 5.6.2.2 GO:0003677 ... P11388 28977631 BindingDB: EC50=810nM, IC50=56000nM
    351032 5gwk:B (3.152) BS01 dna 5.6.2.2 GO:0003677 ... P11388 28977631
    351033 5gwk:B (3.152) BS02 dna 5.6.2.2 GO:0003677 ... P11388 28977631
    351034 5gwk:B (3.152) BS03 dna 5.6.2.2 GO:0003677 ... P11388 28977631
    351035 5gwk:B (3.152) BS04 MG 5.6.2.2 GO:0003677 ... P11388 28977631
    351036 5gwk:B (3.152) BS05 EVP 5.6.2.2 GO:0003677 ... P11388 28977631 BindingDB: EC50=810nM, IC50=56000nM
    351037 5gwo:A (2.816) BS01 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351038 5gwo:A (2.816) BS02 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351039 5gwo:A (2.816) BS03 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351040 5gwo:B (2.816) BS01 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351041 5gwo:B (2.816) BS02 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351042 5gwo:C (2.816) BS01 A8S ? N/A Q6EN42 28827170
    351043 5gwo:D (2.816) BS01 A8S ? N/A Q6EN42 28827170
    351044 5gwp:A (2.577) BS01 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351045 5gwp:A (2.577) BS02 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351046 5gwp:A (2.577) BS03 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351047 5gwp:B (2.577) BS01 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351048 5gwp:B (2.577) BS02 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351049 5gwp:B (2.577) BS03 MG 3.1.3.16 GO:0004722 ... Q6L5H6 28827170
    351050 5gwp:C (2.577) BS01 A8S ? N/A Q6EN42 28827170
    351051 5gwp:D (2.577) BS01 A8S ? N/A Q6EN42 28827170
    351052 5gwr:A (2.2) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351053 5gwr:B (2.2) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351054 5gwr:C (2.2) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351055 5gwr:D (2.2) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351056 5gws:A (2.35) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351057 5gws:B (2.35) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351058 5gws:C (2.35) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351059 5gws:D (2.35) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351060 5gwt:A (1.9) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351061 5gwt:B (1.9) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351062 5gwt:C (1.9) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351063 5gwt:D (1.9) BS01 NAD N/A GO:0016491 ... N/A 29057974
    351064 5gwv:D (2.4) BS01 78S ? GO:0003677 ... A0A010
    P39476
    30837154
    351065 5gwv:D (2.4) BS02 78S ? GO:0003677 ... A0A010
    P39476
    30837154
    351066 5gwx:A (2.205) BS01 SAM ? GO:0005829 ... F6KV61 27934872
    351067 5gwx:A (2.205) BS02 SAR ? GO:0005829 ... F6KV61 27934872
    351068 5gwy:A (2.852) BS01 peptide 3.4.19.12
    3.4.22.-
    GO:0008233 ... P0C6U6 26948040
    351069 5gwy:B (2.852) BS01 peptide 3.4.19.12
    3.4.22.-
    GO:0008233 ... P0C6U6 26948040
    351070 5gwy:B (2.852) BS02 peptide 3.4.19.12
    3.4.22.-
    GO:0008233 ... P0C6U6 26948040
    351071 5gwz:A (2.444) BS01 peptide 2.7.7.50
    3.4.19.12
    3.4.22.-
    GO:0008233 ... P0C6V6 28287727
    351072 5gwz:B (2.444) BS01 peptide 2.7.7.50
    3.4.19.12
    3.4.22.-
    GO:0008233 ... P0C6V6 28287727
    351073 5gwz:B (2.444) BS02 peptide 2.7.7.50
    3.4.19.12
    3.4.22.-
    GO:0008233 ... P0C6V6 28287727
    351074 5gx1:A (1.6) BS01 HG ? GO:0004341 ... Q95YI4 28009544
    351075 5gx1:A (1.6) BS02 HG ? GO:0004341 ... Q95YI4 28009544
    351076 5gx1:A (1.6) BS03 MG ? GO:0004341 ... Q95YI4 28009544
    351077 5gx2:A (1.6) BS01 HG ? GO:0004341 ... Q95YI4 28009544
    351078 5gx2:A (1.6) BS02 MG ? GO:0004341 ... Q95YI4 28009544
    351079 5gx3:A (1.6) BS01 HG ? GO:0004341 ... Q95YI4 28009544
    351080 5gx3:A (1.6) BS02 MG ? GO:0004341 ... Q95YI4 28009544
    351081 5gx4:A (1.6) BS01 HG ? GO:0004341 ... Q95YI4 28009544
    351082 5gx4:A (1.6) BS02 MG ? GO:0004341 ... Q95YI4 28009544
    351083 5gx5:A (1.6) BS01 MG ? GO:0004341 ... Q95YI4 28009544
    351084 5gx6:A (1.81) BS01 ASG ? GO:0005886 ... D1AWE0 28432302
    351085 5gx6:A (1.81) BS02 GCD ? GO:0005886 ... D1AWE0 28432302
    351086 5gx6:A (1.81) BS03 CA ? GO:0005886 ... D1AWE0 28432302
    351087 5gx6:B (1.81) BS01 ASG ? GO:0005886 ... D1AWE0 28432302
    351088 5gx6:B (1.81) BS02 GCD ? GO:0005886 ... D1AWE0 28432302
    351089 5gx6:B (1.81) BS03 CA ? GO:0005886 ... D1AWE0 28432302
    351090 5gx6:C (1.81) BS01 ASG ? GO:0005886 ... D1AWE0 28432302
    351091 5gx6:C (1.81) BS02 GCD ? GO:0005886 ... D1AWE0 28432302
    351092 5gx6:C (1.81) BS03 CA ? GO:0005886 ... D1AWE0 28432302
    351093 5gx7:A (1.991) BS01 NG6 ? GO:0005886 ... D1AWE0 28432302
    351094 5gx7:A (1.991) BS02 GCD ? GO:0005886 ... D1AWE0 28432302
    351095 5gx7:A (1.991) BS03 CA ? GO:0005886 ... D1AWE0 28432302
    351096 5gx7:B (1.991) BS01 NG6 ? GO:0005886 ... D1AWE0 28432302
    351097 5gx7:B (1.991) BS02 GCD ? GO:0005886 ... D1AWE0 28432302
    351098 5gx7:B (1.991) BS03 CA ? GO:0005886 ... D1AWE0 28432302
    351099 5gx7:C (1.991) BS01 NG6 ? GO:0005886 ... D1AWE0 28432302
    351100 5gx7:C (1.991) BS02 GCD ? GO:0005886 ... D1AWE0 28432302
    351101 5gx7:C (1.991) BS03 CA ? GO:0005886 ... D1AWE0 28432302
    351102 5gx8:A (1.778) BS01 CA ? GO:0005886 ... D1AWE0 28432302
    351103 5gx8:A (1.778) BS02 SO4 ? GO:0005886 ... D1AWE0 28432302
    351104 5gx8:A (1.778) BS03 SO4 ? GO:0005886 ... D1AWE0 28432302
    351105 5gx8:B (1.778) BS01 SO4 ? GO:0005886 ... D1AWE0 28432302
    351106 5gx8:B (1.778) BS02 CA ? GO:0005886 ... D1AWE0 28432302
    351107 5gx8:B (1.778) BS03 SO4 ? GO:0005886 ... D1AWE0 28432302
    351108 5gx8:B (1.778) BS04 SO4 ? GO:0005886 ... D1AWE0 28432302
    351109 5gxd:A (2.001) BS01 AMP 6.2.1.- GO:0000166 ... A8LRC0 N/A
    351110 5gxd:A (2.001) BS02 COA 6.2.1.- GO:0000166 ... A8LRC0 N/A
    351111 5gxe:A (1.696) BS01 NAP 1.3.1.84 GO:0005737 ... Q5LS56 N/A
    351112 5gxe:B (1.696) BS01 NAP 1.3.1.84 GO:0005737 ... Q5LS56 N/A
    351113 5gxg:A (1.7) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 28223532
    351114 5gxg:B (1.7) BS01 FES ? GO:0005515 ... P00259 28223532
    351115 5gxh:A (1.8) BS01 rna ? N/A Q8TEQ6 27881600
    351116 5gxi:A (1.85) BS01 rna ? N/A Q8TEQ6 27881600
    351117 5gxo:A (2.3) BS01 MN 1.15.1.1 GO:0004784 ... P04179 28711502
    351118 5gxo:B (2.3) BS01 MN 1.15.1.1 GO:0004784 ... P04179 28711502
    351119 5gxp:A (2.8) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351120 5gxp:A (2.8) BS02 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351121 5gxp:A (2.8) BS03 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351122 5gxp:A (2.8) BS04 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351123 5gxp:A (2.8) BS05 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351124 5gxp:A (2.8) BS06 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351125 5gxp:A (2.8) BS07 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351126 5gxp:A (2.8) BS08 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351127 5gxp:B (2.8) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351128 5gxp:B (2.8) BS02 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351129 5gxp:B (2.8) BS03 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    351130 5gxq:A (2.85) BS01 dna ? GO:0000786 ... A0A1X8XL64 28374988
    351131 5gxq:A (2.85) BS02 dna ? GO:0000786 ... A0A1X8XL64 28374988
    351132 5gxq:B (2.85) BS01 dna ? GO:0000781 ... P62805 28374988
    351133 5gxq:B (2.85) BS02 dna ? GO:0000781 ... P62805 28374988
    351134 5gxq:C (2.85) BS01 dna ? GO:0000786 ... P04908 28374988
    351135 5gxq:C (2.85) BS02 dna ? GO:0000786 ... P04908 28374988
    351136 5gxq:D (2.85) BS01 dna ? GO:0000786 ... P06899 28374988
    351137 5gxq:D (2.85) BS02 dna ? GO:0000786 ... P06899 28374988
    351138 5gxq:E (2.85) BS01 dna ? GO:0000786 ... A0A1X8XL64 28374988
    351139 5gxq:E (2.85) BS02 dna ? GO:0000786 ... A0A1X8XL64 28374988
    351140 5gxq:F (2.85) BS01 dna ? GO:0000781 ... P62805 28374988
    351141 5gxq:F (2.85) BS02 dna ? GO:0000781 ... P62805 28374988
    351142 5gxq:G (2.85) BS01 dna ? GO:0000786 ... P04908 28374988
    351143 5gxq:G (2.85) BS02 dna ? GO:0000786 ... P04908 28374988
    351144 5gxq:H (2.85) BS01 dna ? GO:0000786 ... P06899 28374988
    351145 5gxq:H (2.85) BS02 dna ? GO:0000786 ... P06899 28374988
    351146 5gxu:A (2.3) BS01 FMN 1.6.2.4 GO:0003958 ... Q9SUM3 28103421
    351147 5gxu:A (2.3) BS02 FAD 1.6.2.4 GO:0003958 ... Q9SUM3 28103421
    351148 5gxu:B (2.3) BS01 FAD 1.6.2.4 GO:0003958 ... Q9SUM3 28103421
    351149 5gxw:A (2.394) BS01 peptide ? N/A P52293 28939615
    351150 5gxx:A (1.5) BS01 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351151 5gxx:A (1.5) BS02 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351152 5gxx:B (1.5) BS01 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351153 5gxx:B (1.5) BS02 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351154 5gxy:A (1.7) BS01 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351155 5gxy:A (1.7) BS02 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351156 5gxy:A (1.7) BS03 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351157 5gxy:A (1.7) BS04 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351158 5gxy:B (1.7) BS01 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351159 5gxy:B (1.7) BS02 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351160 5gxy:B (1.7) BS03 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351161 5gxy:B (1.7) BS04 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351162 5gxz:A (2.05) BS01 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351163 5gxz:A (2.05) BS02 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351164 5gxz:A (2.05) BS03 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351165 5gxz:A (2.05) BS04 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351166 5gxz:A (2.05) BS05 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351167 5gxz:A (2.05) BS06 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351168 5gxz:A (2.05) BS07 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351169 5gxz:B (2.05) BS01 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351170 5gxz:B (2.05) BS02 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351171 5gxz:B (2.05) BS03 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351172 5gxz:B (2.05) BS04 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351173 5gxz:B (2.05) BS05 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351174 5gxz:B (2.05) BS06 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351175 5gxz:B (2.05) BS07 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351176 5gy0:A (1.74) BS01 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351177 5gy0:A (1.74) BS02 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351178 5gy0:A (1.74) BS03 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351179 5gy0:A (1.74) BS04 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351180 5gy0:A (1.74) BS05 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351181 5gy0:A (1.74) BS06 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351182 5gy0:B (1.74) BS01 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351183 5gy0:B (1.74) BS02 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351184 5gy0:B (1.74) BS03 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351185 5gy0:B (1.74) BS04 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351186 5gy0:B (1.74) BS05 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351187 5gy0:B (1.74) BS06 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351188 5gy1:A (1.99) BS01 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351189 5gy1:A (1.99) BS02 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351190 5gy1:A (1.99) BS03 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351191 5gy1:A (1.99) BS04 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351192 5gy1:A (1.99) BS05 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351193 5gy1:B (1.99) BS01 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351194 5gy1:B (1.99) BS02 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351195 5gy1:B (1.99) BS03 BGC 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351196 5gy1:B (1.99) BS04 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351197 5gy1:B (1.99) BS05 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    351198 5gy6:A (1.5) BS01 ZN 3.1.27.3 GO:0003723 ... B1Q4V2 N/A
    351199 5gy7:A (1.43) BS01 UDP 5.1.3.2 GO:0003978 ... P09147 N/A
    351200 5gy7:A (1.43) BS02 NAD 5.1.3.2 GO:0003978 ... P09147 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).