SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    364401 5jn8:D (1.85) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364402 5jn8:D (1.85) BS04 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364403 5jn8:D (1.85) BS05 ACT 4.2.1.1 GO:0004089 ... P22748 28975383
    364404 5jn9:A (2.1) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364405 5jn9:A (2.1) BS02 EZL 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=93nM
    364406 5jn9:B (2.1) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364407 5jn9:B (2.1) BS02 EZL 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=93nM
    364408 5jn9:B (2.1) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364409 5jn9:C (2.1) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364410 5jn9:C (2.1) BS02 EZL 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=93nM
    364411 5jn9:C (2.1) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364412 5jn9:C (2.1) BS04 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364413 5jn9:D (2.1) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364414 5jn9:D (2.1) BS02 EZL 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=93nM
    364415 5jn9:D (2.1) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364416 5jn9:D (2.1) BS04 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364417 5jn9:D (2.1) BS05 ACT 4.2.1.1 GO:0004089 ... P22748 28975383
    364418 5jna:A (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364419 5jna:A (2.0) BS02 TOR 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=4900nM
    364420 5jna:A (2.0) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364421 5jna:A (2.0) BS04 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364422 5jna:B (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364423 5jna:B (2.0) BS02 TOR 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=4900nM
    364424 5jna:B (2.0) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364425 5jna:C (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364426 5jna:C (2.0) BS02 TOR 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=4900nM
    364427 5jna:C (2.0) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364428 5jna:C (2.0) BS04 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364429 5jna:D (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364430 5jna:D (2.0) BS02 TOR 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=4900nM
    364431 5jna:D (2.0) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364432 5jna:D (2.0) BS04 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364433 5jna:D (2.0) BS05 ACT 4.2.1.1 GO:0004089 ... P22748 28975383
    364434 5jnb:B (2.486) BS01 MG 2.7.7.19 N/A O17087 27288313
    364435 5jnb:C (2.486) BS01 peptide 2.7.7.19 N/A O17087 27288313
    364436 5jnb:D (2.486) BS01 peptide 2.7.7.19 N/A O17087 27288313
    364437 5jnc:A (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364438 5jnc:A (2.0) BS02 6LH 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=8600nM
    364439 5jnc:B (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364440 5jnc:B (2.0) BS02 6LH 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=8600nM
    364441 5jnc:B (2.0) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364442 5jnc:C (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364443 5jnc:C (2.0) BS02 6LH 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=8600nM
    364444 5jnc:C (2.0) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364445 5jnc:D (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    364446 5jnc:D (2.0) BS02 6LH 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=8600nM
    364447 5jnc:D (2.0) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364448 5jnc:D (2.0) BS04 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    364449 5jnc:D (2.0) BS05 ACT 4.2.1.1 GO:0004089 ... P22748 28975383
    364450 5jne:A (2.85) BS01 ZN 2.3.2.-
    6.3.2.-
    GO:0008270 ... Q04195
    Q12306
    27509863
    364451 5jne:B (2.85) BS01 6LN 2.3.2.- GO:0000022 ... P50623 27509863
    364452 5jne:C (2.85) BS01 6LN ? N/A Q12306 27509863
    364453 5jne:E (2.85) BS01 ZN 2.3.2.-
    6.3.2.-
    GO:0008270 ... Q04195
    Q12306
    27509863
    364454 5jne:F (2.85) BS01 6LN 2.3.2.- GO:0000022 ... P50623 27509863
    364455 5jne:G (2.85) BS01 6LN ? N/A Q12306 27509863
    364456 5jnl:A (1.6) BS01 L54 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.27uM
    364457 5jnl:A (1.6) BS02 MN 1.1.1.267 GO:0008299 ... Q8IKG4 27487410
    364458 5jnl:B (1.6) BS01 L54 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.27uM
    364459 5jnl:B (1.6) BS02 MN 1.1.1.267 GO:0008299 ... Q8IKG4 27487410
    364460 5jnn:A (2.3) BS01 6LM ? GO:0004864 ... O80992 27518563 MOAD: ic50=4504nM
    364461 5jnq:A (2.6) BS01 TUM 2.7.8.13 GO:0005886 ... R0BTE9 28068312
    364462 5jnw:A (1.86) BS01 6LJ 3.1.3.2
    3.1.3.48
    GO:0003993 ... P11064 28346406 MOAD: ic50=0.46uM
    364463 5jo0:A (1.8) BS01 L56 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.05uM
    364464 5jo0:A (1.8) BS02 MN 1.1.1.267 GO:0008299 ... Q8IKG4 27487410
    364465 5jo0:A (1.8) BS03 6LR 1.1.1.267 GO:0008299 ... Q8IKG4 27487410
    364466 5jo0:B (1.8) BS01 L56 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.05uM
    364467 5jo0:B (1.8) BS02 MN 1.1.1.267 GO:0008299 ... Q8IKG4 27487410
    364468 5jo1:A (2.3) BS01 6LM ? N/A Q9SSM7 27518563
    364469 5jo1:B (2.3) BS01 MG 3.1.3.16 GO:0004722 ... Q9CAJ0 27518563
    364470 5jo1:B (2.3) BS02 MG 3.1.3.16 GO:0004722 ... Q9CAJ0 27518563
    364471 5jo2:A (2.42) BS01 A8S ? N/A Q9SSM7 27518563
    364472 5jo2:B (2.42) BS01 MG 3.1.3.16 GO:0004722 ... Q9CAJ0 27518563
    364473 5jo3:B (1.49) BS01 ZN 3.1.4.35 GO:0004114 ... O76074 N/A
    364474 5jo3:B (1.49) BS02 6LK 3.1.4.35 GO:0004114 ... O76074 N/A
    364475 5jo9:A (2.894) BS01 PO4 ? GO:0016491 ... Q89FN7 27827356
    364476 5jo9:A (2.894) BS02 SOR ? GO:0016491 ... Q89FN7 27827356
    364477 5job:A (1.45) BS01 THP 3.1.31.1 N/A P00644 N/A
    364478 5job:A (1.45) BS02 CA 3.1.31.1 N/A P00644 N/A
    364479 5jog:A (2.46) BS01 ZN 3.4.-.- GO:0008233 ... Q92905 27774986
    364480 5jog:A (2.46) BS02 6LT 3.4.-.- GO:0008233 ... Q92905 27774986 MOAD: ic50=0.0058uM
    BindingDB: IC50=5.8nM
    364481 5joh:A (1.99) BS01 ZN 3.4.-.- GO:0008233 ... Q92905 27774986
    364482 5joh:A (1.99) BS02 6M3 3.4.-.- GO:0008233 ... Q92905 27774986 MOAD: ic50=1.1uM
    364483 5joj:A (-1.00) BS01 CA ? GO:0005509 ... P13796 28145401
    364484 5joj:A (-1.00) BS02 CA ? GO:0005509 ... P13796 28145401
    364485 5jom:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 27487825
    364486 5jon:A (2.042) BS01 GLC ? GO:0008643 ... O88703
    P0AEY0
    27858593
    364487 5jon:A (2.042) BS02 GLC ? GO:0008643 ... O88703
    P0AEY0
    27858593
    364488 5jon:B (2.042) BS01 GLC ? GO:0008643 ... O88703
    P0AEY0
    27858593
    364489 5jon:B (2.042) BS02 GLC ? GO:0008643 ... O88703
    P0AEY0
    27858593
    364490 5jop:D (1.75) BS01 BGC N/A N/A N/A 28287405
    364491 5jop:D (1.75) BS02 GAL N/A N/A N/A 28287405
    364492 5jop:D (1.75) BS03 GAL N/A N/A N/A 28287405
    364493 5jop:L (1.75) BS01 GAL N/A N/A N/A 28287405
    364494 5jop:L (1.75) BS02 GAL N/A N/A N/A 28287405
    364495 5jov:A (1.5) BS01 B9D 3.2.1.177 GO:0000272 ... A7LXT0 27466444
    364496 5jox:A (1.8) BS01 EDG 3.2.1.55 GO:0000272 ... A7LXT8 27466444 MOAD: Kd=35uM
    364497 5jox:B (1.8) BS01 EDG 3.2.1.55 GO:0000272 ... A7LXT8 27466444 MOAD: Kd=35uM
    364498 5joy:A (1.9) BS01 6LW 3.2.1.55 GO:0000272 ... A7LXT8 27466444
    364499 5joy:B (1.9) BS01 6LW 3.2.1.55 GO:0000272 ... A7LXT8 27466444
    364500 5joz:A (2.28) BS01 CA 3.2.1.55 GO:0000272 ... A7LXU0 27466444
    364501 5joz:B (2.28) BS01 CA 3.2.1.55 GO:0000272 ... A7LXU0 27466444
    364502 5jp0:A (2.3) BS01 BGC 3.2.1.21 GO:0000272 ... A7LXU3 27466444
    364503 5jp0:A (2.3) BS02 MG 3.2.1.21 GO:0000272 ... A7LXU3 27466444
    364504 5jp0:B (2.3) BS01 BGC 3.2.1.21 GO:0000272 ... A7LXU3 27466444
    364505 5jp0:B (2.3) BS02 MG 3.2.1.21 GO:0000272 ... A7LXU3 27466444
    364506 5jp2:A (2.4) BS01 peptide ? N/A A0A0R4IA99 27237791
    364507 5jp2:A (2.4) BS02 ZN ? N/A A0A0R4IA99 27237791
    364508 5jp2:B (2.4) BS01 peptide ? N/A A0A0R4IA99 27237791
    364509 5jp2:B (2.4) BS02 ZN ? N/A A0A0R4IA99 27237791
    364510 5jp4:A (2.043) BS01 peptide ? GO:0000184 ... Q9P805 27354705
    364511 5jp6:A (1.5) BS01 ZN 3.5.1.- GO:0005975 ... Q6MI90 27211869
    364512 5jp7:A (1.26) BS01 HEC ? GO:0005506 ... P00138 28451315
    364513 5jp9:A (2.101) BS01 DCM ? GO:0004799 ... B4Y380 28000775
    364514 5jp9:A (2.101) BS02 DCM ? GO:0004799 ... B4Y380 28000775
    364515 5jp9:B (2.101) BS01 DCM ? GO:0004799 ... B4Y380 28000775
    364516 5jp9:B (2.101) BS02 DCM ? GO:0004799 ... B4Y380 28000775
    364517 5jpc:A (2.1) BS01 FMC 3.2.2.30
    3.2.2.9
    GO:0005829 ... Q9ZMY2 27856757
    364518 5jpf:A (2.3993) BS01 peptide 3.1.3.16 GO:0004722 ... C4YM68 27578752
    364519 5jpf:A (2.3993) BS02 MN 3.1.3.16 GO:0004722 ... C4YM68 27578752
    364520 5jpf:A (2.3993) BS03 MN 3.1.3.16 GO:0004722 ... C4YM68 27578752
    364521 5jpg:A (1.9) BS01 GLC ? GO:0005634 ... P47967 34944498
    364522 5jpg:A (1.9) BS02 GAL ? GO:0005634 ... P47967 34944498
    364523 5jpg:B (1.9) BS01 GLC ? GO:0005634 ... P47967 34944498
    364524 5jpg:B (1.9) BS02 GAL ? GO:0005634 ... P47967 34944498
    364525 5jph:A (1.46) BS01 COA 2.3.1.- GO:0004343 ... Q5HH30 27783928
    364526 5jph:A (1.46) BS02 COA 2.3.1.- GO:0004343 ... Q5HH30 27783928
    364527 5jph:B (1.46) BS01 COA 2.3.1.- GO:0004343 ... Q5HH30 27783928
    364528 5jph:B (1.46) BS02 COA 2.3.1.- GO:0004343 ... Q5HH30 27783928
    364529 5jph:C (1.46) BS01 COA 2.3.1.- GO:0004343 ... Q5HH30 27783928
    364530 5jph:C (1.46) BS02 COA 2.3.1.- GO:0004343 ... Q5HH30 27783928
    364531 5jpi:A (2.15) BS01 NAD 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364532 5jpi:A (2.15) BS02 DEA 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364533 5jpi:A (2.15) BS03 NAD 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364534 5jpi:B (2.15) BS01 NAD 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364535 5jpi:B (2.15) BS02 NAD 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364536 5jpi:B (2.15) BS03 DEA 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364537 5jpi:C (2.15) BS01 NAD 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364538 5jpi:C (2.15) BS02 DEA 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364539 5jpi:C (2.15) BS03 NAD 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364540 5jpi:D (2.15) BS01 NAD 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364541 5jpi:D (2.15) BS02 NAD 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364542 5jpi:D (2.15) BS03 DEA 3.13.2.1 GO:0000166 ... Q5CPH1 N/A
    364543 5jpq:0 (7.3) BS01 rna ? GO:0003735 ... I7MAL3 27419870
    364544 5jpq:1 (7.3) BS01 rna ? GO:0000028 ... Q3E7X9 27419870
    364545 5jpq:C (7.3) BS01 rna N/A N/A N/A 27419870
    364546 5jpq:S (7.3) BS01 rna ? GO:0030515 ... A0A0E3MJI1 27419870
    364547 5jpq:T (7.3) BS01 rna ? GO:0030515 ... A0A0E3MJI1 27419870
    364548 5jpq:U (7.3) BS01 rna ? GO:0001682 ... P55858 27419870
    364549 5jpq:V (7.3) BS01 rna ? GO:0001682 ... P55858 27419870
    364550 5jpq:Y (7.3) BS01 rna ? GO:0000447 ... Q06506 27419870
    364551 5jpq:c (7.3) BS01 rna ? GO:0005730 ... G0SE90 27419870
    364552 5jpq:d (7.3) BS01 rna ? GO:0004540 ... G0SE30 27419870
    364553 5jpq:f (7.3) BS01 rna 2.1.1.260 GO:0000447 ... Q06287 27419870
    364554 5jpq:g (7.3) BS01 rna ? GO:0003676 ... G0S3V7 27419870
    364555 5jpq:i (7.3) BS01 rna 2.3.1.- GO:0000049 ... G0S273 27419870
    364556 5jpq:k (7.3) BS01 rna ? N/A G0S7X0 27419870
    364557 5jpq:n (7.3) BS01 rna N/A N/A N/A 27419870
    364558 5jpq:o (7.3) BS01 rna ? GO:0003735 ... Q23DE3 27419870
    364559 5jpq:p (7.3) BS01 rna ? GO:0003723 ... P0C233 27419870
    364560 5jpq:q (7.3) BS01 rna ? GO:0000028 ... P26783 27419870
    364561 5jpq:r (7.3) BS01 rna ? GO:0003735 ... A4VD76 27419870
    364562 5jpq:t (7.3) BS01 rna ? GO:0003735 ... Q22AV0 27419870
    364563 5jpq:w (7.3) BS01 rna ? GO:0000028 ... P06367 27419870
    364564 5jpq:x (7.3) BS01 rna ? GO:0000462 ... P0CX51 27419870
    364565 5jpq:y (7.3) BS01 rna ? GO:0003735 ... Q22B78 27419870
    364566 5jpq:z (7.3) BS01 rna ? GO:0002181 ... P0C0W1 27419870
    364567 5jpr:A (1.806) BS01 HEM 1.11.1.11 GO:0004601 ... Q43758 27897163
    364568 5jpt:A (2.935) BS01 CDP 3.6.4.13 GO:0000390 ... P53131 28180308
    364569 5jpt:B (2.935) BS01 CDP 3.6.4.13 GO:0000390 ... P53131 28180308
    364570 5jpu:A (1.5) BS01 3ZQ 3.3.2.8 GO:0016787 ... Q9ZAG3 N/A
    364571 5jpu:B (1.5) BS01 3ZQ 3.3.2.8 GO:0016787 ... Q9ZAG3 N/A
    364572 5jpv:A (1.9) BS01 GAL ? N/A P07306 28230359
    364573 5jpv:A (1.9) BS02 CA ? N/A P07306 28230359
    364574 5jpv:A (1.9) BS03 CA ? N/A P07306 28230359
    364575 5jpv:A (1.9) BS04 CA ? N/A P07306 28230359
    364576 5jpv:B (1.9) BS01 GAL ? N/A P07306 28230359
    364577 5jpv:B (1.9) BS02 CA ? N/A P07306 28230359
    364578 5jpv:B (1.9) BS03 CA ? N/A P07306 28230359
    364579 5jpv:B (1.9) BS04 CA ? N/A P07306 28230359
    364580 5jpx:A (-1.00) BS01 ZN 2.3.2.27 GO:0008270 ... P19474 28753623
    364581 5jq0:A (1.4) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534
    364582 5jq0:A (1.4) BS02 6M4 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534
    364583 5jq1:A (1.83) BS01 CA ? N/A P07306 28230359
    364584 5jq1:A (1.83) BS02 CA ? N/A P07306 28230359
    364585 5jq1:A (1.83) BS03 CA ? N/A P07306 28230359
    364586 5jq1:A (1.83) BS04 ZPF ? N/A P07306 28230359 BindingDB: Kd=7180nM
    364587 5jq1:B (1.83) BS01 CA ? N/A P07306 28230359
    364588 5jq1:B (1.83) BS02 CA ? N/A P07306 28230359
    364589 5jq1:B (1.83) BS03 ZPF ? N/A P07306 28230359 BindingDB: Kd=7180nM
    364590 5jq1:B (1.83) BS04 CA ? N/A P07306 28230359
    364591 5jq2:A (2.0) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27639964
    364592 5jq2:A (2.0) BS02 140 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27639964 BindingDB: Kd=82nM
    364593 5jq2:A (2.0) BS03 RU8 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27639964
    364594 5jq2:B (2.0) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27639964
    364595 5jq2:B (2.0) BS02 140 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27639964 BindingDB: Kd=82nM
    364596 5jq2:B (2.0) BS03 RU8 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27639964
    364597 5jq5:A (1.94) BS01 I74 2.7.11.22 GO:0000082 ... P24941 28125165 MOAD: Kd=2341nM
    BindingDB: IC50=620nM
    364598 5jq7:A (2.69) BS01 T0R ? N/A Q05320 27362232 BindingDB: EC50=63nM, Kd=16000nM
    364599 5jq7:B (2.69) BS01 T0R ? N/A Q05320 27362232 BindingDB: EC50=63nM, Kd=16000nM
    364600 5jq8:A (1.94) BS01 I73 2.7.11.22 GO:0000082 ... P24941 28125165 BindingDB: IC50=580nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).