SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    36601 1nkz:A (2.0) BS01 BCL ? GO:0005886 ... P26789 12595263
    36602 1nkz:A (2.0) BS02 BCL ? GO:0005886 ... P26789 12595263
    36603 1nkz:A (2.0) BS03 BCL ? GO:0005886 ... P26789 12595263
    36604 1nkz:B (2.0) BS01 BCL ? GO:0005886 ... P26790 12595263
    36605 1nkz:B (2.0) BS02 BCL ? GO:0005886 ... P26790 12595263
    36606 1nkz:B (2.0) BS03 BCL ? GO:0005886 ... P26790 12595263
    36607 1nkz:C (2.0) BS01 BCL ? GO:0005886 ... P26789 12595263
    36608 1nkz:C (2.0) BS02 BCL ? GO:0005886 ... P26789 12595263
    36609 1nkz:C (2.0) BS03 BCL ? GO:0005886 ... P26789 12595263
    36610 1nkz:C (2.0) BS04 BCL ? GO:0005886 ... P26789 12595263
    36611 1nkz:D (2.0) BS01 BCL ? GO:0005886 ... P26790 12595263
    36612 1nkz:D (2.0) BS02 BCL ? GO:0005886 ... P26790 12595263
    36613 1nkz:D (2.0) BS03 BCL ? GO:0005886 ... P26790 12595263
    36614 1nkz:E (2.0) BS01 BCL ? GO:0005886 ... P26789 12595263
    36615 1nkz:E (2.0) BS02 BCL ? GO:0005886 ... P26789 12595263
    36616 1nkz:E (2.0) BS03 BCL ? GO:0005886 ... P26789 12595263
    36617 1nkz:E (2.0) BS04 BCL ? GO:0005886 ... P26789 12595263
    36618 1nkz:F (2.0) BS01 BCL ? GO:0005886 ... P26790 12595263
    36619 1nkz:F (2.0) BS02 BCL ? GO:0005886 ... P26790 12595263
    36620 1nkz:F (2.0) BS03 BCL ? GO:0005886 ... P26790 12595263
    36621 1nl0:G (2.2) BS01 CA 3.4.21.22 GO:0005509 ... P00740 14722079
    36622 1nl0:G (2.2) BS02 CA 3.4.21.22 GO:0005509 ... P00740 14722079
    36623 1nl0:G (2.2) BS03 CA 3.4.21.22 GO:0005509 ... P00740 14722079
    36624 1nl0:G (2.2) BS04 CA 3.4.21.22 GO:0005509 ... P00740 14722079
    36625 1nl0:G (2.2) BS05 CA 3.4.21.22 GO:0005509 ... P00740 14722079
    36626 1nl0:G (2.2) BS06 CA 3.4.21.22 GO:0005509 ... P00740 14722079
    36627 1nl1:A (1.9) BS01 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36628 1nl1:A (1.9) BS02 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36629 1nl1:A (1.9) BS03 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36630 1nl1:A (1.9) BS04 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36631 1nl1:A (1.9) BS05 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36632 1nl1:A (1.9) BS06 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36633 1nl2:A (2.3) BS01 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36634 1nl2:A (2.3) BS02 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36635 1nl2:A (2.3) BS03 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36636 1nl2:A (2.3) BS04 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36637 1nl2:A (2.3) BS05 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36638 1nl2:A (2.3) BS06 CA 3.4.21.5 GO:0005509 ... P00735 12923575
    36639 1nl2:A (2.3) BS07 LPS 3.4.21.5 GO:0005509 ... P00735 12923575
    36640 1nl4:B (2.7) BS01 ZN 2.5.1.58 GO:0003824 ... Q02293 12657284
    36641 1nl4:B (2.7) BS02 HFP 2.5.1.58 GO:0003824 ... Q02293 12657284
    36642 1nl4:B (2.7) BS03 FTL 2.5.1.58 GO:0003824 ... Q02293 12657284
    36643 1nl5:A (2.1) BS01 GLC ? GO:0005515 ... P0AEX9 12794084
    36644 1nl5:A (2.1) BS02 GLC ? GO:0005515 ... P0AEX9 12794084
    36645 1nl6:A (2.8) BS01 750 3.4.22.38 GO:0006508 ... P43235 11311061 BindingDB: IC50=30nM, Ki=0.0048nM
    36646 1nl6:B (2.8) BS01 750 3.4.22.38 GO:0006508 ... P43235 11311061 BindingDB: IC50=30nM, Ki=0.0048nM
    36647 1nl7:A (1.903) BS01 COA 2.3.1.9 GO:0003985 ... P07097 N/A
    36648 1nl7:B (1.903) BS01 COA 2.3.1.9 GO:0003985 ... P07097 N/A
    36649 1nl9:A (2.4) BS01 989 3.1.3.48 GO:0004725 ... P18031 12670229 BindingDB: Ki=631nM
    36650 1nlf:B (1.95) BS01 SO4 ? N/A P20356 12777796
    36651 1nli:A (1.93) BS01 ADE 3.2.2.22 GO:0017148 ... P09989 12676436 MOAD: Kd=260uM
    36652 1nlj:A (2.4) BS01 2CA 3.4.22.38 GO:0006508 ... P43235 11311061 BindingDB: Ki=0.16nM, IC50=70nM
    36653 1nlj:B (2.4) BS01 2CA 3.4.22.38 GO:0006508 ... P43235 11311061 BindingDB: Ki=0.16nM, IC50=70nM
    36654 1nlk:L (2.0) BS01 ADP 2.7.4.6 GO:0004550 ... P15266 8263923
    36655 1nlk:R (2.0) BS01 ADP 2.7.4.6 GO:0004550 ... P15266 8263923
    36656 1nlm:A (2.5) BS01 UD1 2.4.1.227 GO:0005515 ... P17443 12538870
    36657 1nlm:B (2.5) BS01 UD1 2.4.1.227 GO:0005515 ... P17443 12538870
    36658 1nln:A (1.6) BS01 peptide 3.4.22.39 GO:0003677 ... P03252 12758141
    36659 1nlo:C (-1.00) BS01 peptide 2.7.10.2 GO:0006897 ... P00523 8807900
    36660 1nlp:C (-1.00) BS01 peptide 2.7.10.2 GO:0006897 ... P00523 8807900
    36661 1nls:A (0.94) BS01 MN ? GO:0030246 ... P02866 N/A
    36662 1nls:A (0.94) BS02 CA ? GO:0030246 ... P02866 N/A
    36663 1nlt:A (2.7) BS01 peptide ? GO:0006457 ... P25491 14656432
    36664 1nlt:A (2.7) BS02 ZN ? GO:0006457 ... P25491 14656432
    36665 1nlt:A (2.7) BS03 ZN ? GO:0006457 ... P25491 14656432
    36666 1nlu:A (1.3) BS01 peptide 3.4.21.100 GO:0004252 ... P42790 14733955
    36667 1nlu:A (1.3) BS02 peptide 3.4.21.100 GO:0004252 ... P42790 14733955
    36668 1nlu:A (1.3) BS03 CA 3.4.21.100 GO:0004252 ... P42790 14733955
    36669 1nlv:A (1.8) BS01 ATP 3.6.4.- GO:0000281 ... P07830 12732734
    36670 1nlv:G (1.8) BS01 CA ? GO:0051015 ... P06396 12732734
    36671 1nlw:A (2.0) BS01 dna ? GO:0000122 ... Q05195 12553908
    36672 1nlw:A (2.0) BS02 dna ? GO:0000122 ... Q05195 12553908
    36673 1nlw:B (2.0) BS01 dna ? GO:0046983 ... P61244 12553908
    36674 1nlw:B (2.0) BS02 dna ? GO:0046983 ... P61244 12553908
    36675 1nlw:D (2.0) BS01 dna ? GO:0000122 ... Q05195 12553908
    36676 1nlw:D (2.0) BS02 dna ? GO:0000122 ... Q05195 12553908
    36677 1nlw:E (2.0) BS01 dna ? GO:0046983 ... P61244 12553908
    36678 1nlw:E (2.0) BS02 dna ? GO:0046983 ... P61244 12553908
    36679 1nlx:A (2.8) BS01 ZN ? N/A P43215 N/A
    36680 1nlx:D (2.8) BS01 ZN ? N/A P43215 N/A
    36681 1nlx:E (2.8) BS01 ZN ? N/A P43215 N/A
    36682 1nlx:F (2.8) BS01 ZN ? N/A P43215 N/A
    36683 1nlx:G (2.8) BS01 ZN ? N/A P43215 N/A
    36684 1nlx:I (2.8) BS01 ZN ? N/A P43215 N/A
    36685 1nlx:K (2.8) BS01 ZN ? N/A P43215 N/A
    36686 1nlx:L (2.8) BS01 ZN ? N/A P43215 N/A
    36687 1nlx:M (2.8) BS01 ZN ? N/A P43215 N/A
    36688 1nlx:N (2.8) BS01 ZN ? N/A P43215 N/A
    36689 1nly:A (2.8) BS01 AGS ? GO:0005515 ... Q7BK04 12727865
    36690 1nly:B (2.8) BS01 AGS ? GO:0005515 ... Q7BK04 12727865
    36691 1nm0:A (2.3) BS01 SO4 1.11.1.6 GO:0004096 ... P42321 14646074
    36692 1nm0:A (2.3) BS02 SO4 1.11.1.6 GO:0004096 ... P42321 14646074
    36693 1nm0:A (2.3) BS03 HEM 1.11.1.6 GO:0004096 ... P42321 14646074
    36694 1nm0:A (2.3) BS04 FMT 1.11.1.6 GO:0004096 ... P42321 14646074
    36695 1nm0:A (2.3) BS05 GOL 1.11.1.6 GO:0004096 ... P42321 14646074
    36696 1nm1:A (1.8) BS01 ATP 3.6.4.- GO:0000281 ... P07830 12732734
    36697 1nm1:G (1.8) BS01 CA ? GO:0051015 ... P06396 12732734
    36698 1nm5:A (2.4) BS01 NAD 7.1.1.1 GO:0003957 ... Q2RSB2 12564924 MOAD: Kd=20uM
    36699 1nm5:B (2.4) BS01 NAD 7.1.1.1 GO:0003957 ... Q2RSB2 12564924 MOAD: Kd=20uM
    36700 1nm5:C (2.4) BS01 NAP 7.1.1.1 N/A Q2RSB4 12564924
    36701 1nm6:A (1.8) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 12873514
    36702 1nm6:A (1.8) BS02 L86 3.4.21.5 GO:0004252 ... P00734 12873514 MOAD: Ki=0.09nM
    BindingDB: Ki=0.090000nM
    36703 1nm9:A (2.1) BS01 GLC 3.2.1.1 GO:0003824 ... P0DUB6 15182367
    36704 1nm9:A (2.1) BS02 AGL 3.2.1.1 GO:0003824 ... P0DUB6 15182367
    36705 1nm9:A (2.1) BS03 GLC 3.2.1.1 GO:0003824 ... P0DUB6 15182367
    36706 1nm9:A (2.1) BS04 AGL 3.2.1.1 GO:0003824 ... P0DUB6 15182367
    36707 1nm9:A (2.1) BS05 HMC 3.2.1.1 GO:0003824 ... P0DUB6 15182367
    36708 1nm9:A (2.1) BS06 CA 3.2.1.1 GO:0003824 ... P0DUB6 15182367
    36709 1nma:H (3.0) BS01 MAN N/A N/A N/A 7517697
    36710 1nma:N (3.0) BS01 MAN 3.2.1.18 GO:0004308 ... P05803 7517697
    36711 1nmb:H (2.2) BS01 MAN N/A N/A N/A 7994573
    36712 1nmb:N (2.2) BS01 BMA 3.2.1.18 GO:0004308 ... P05803 7994573
    36713 1nmb:N (2.2) BS02 MAN 3.2.1.18 GO:0004308 ... P05803 7994573
    36714 1nmb:N (2.2) BS03 MAN 3.2.1.18 GO:0004308 ... P05803 7994573
    36715 1nmb:N (2.2) BS04 MAN 3.2.1.18 GO:0004308 ... P05803 7994573
    36716 1nmb:N (2.2) BS05 CA 3.2.1.18 GO:0004308 ... P05803 7994573
    36717 1nmc:A (2.5) BS01 CA 3.2.1.18 GO:0004308 ... P03472 9642070
    36718 1nmc:N (2.5) BS01 CA 3.2.1.18 GO:0004308 ... P03472 9642070
    36719 1nmd:A (1.9) BS01 ATP 3.6.4.- GO:0000281 ... P07830 12732734
    36720 1nmd:G (1.9) BS01 CA ? GO:0051015 ... P06396 12732734
    36721 1nme:A (1.6) BS01 158 3.4.22.56 GO:0004197 ... P42574 12563278
    36722 1nme:B (1.6) BS01 158 3.4.22.56 GO:0004197 ... P42574 12563278
    36723 1nme:B (1.6) BS02 159 3.4.22.56 GO:0004197 ... P42574 12563278
    36724 1nmi:A (-1.00) BS01 HEC ? GO:0005515 ... P00044 N/A
    36725 1nmk:A (2.1) BS01 SFM 5.2.1.8 GO:0000413 ... P62937 12656618 MOAD: ic50=5.7nM
    36726 1nmk:B (2.1) BS01 SFM 5.2.1.8 GO:0000413 ... P62937 12656618 MOAD: ic50=5.7nM
    36727 1nml:A (2.2) BS01 HEC 1.11.1.5 GO:0004130 ... P83787 15274917
    36728 1nml:A (2.2) BS02 HEC 1.11.1.5 GO:0004130 ... P83787 15274917
    36729 1nmm:A (2.0) BS01 CA ? GO:0003796 ... P29752 11485999
    36730 1nmm:C (2.0) BS01 CA ? GO:0003796 ... P29752 11485999
    36731 1nmo:A (2.2) BS01 FE ? GO:0005737 ... P0AFP6 14519207
    36732 1nmo:A (2.2) BS02 FE ? GO:0005737 ... P0AFP6 14519207
    36733 1nmo:B (2.2) BS01 FE ? GO:0005737 ... P0AFP6 14519207
    36734 1nmo:B (2.2) BS02 FE ? GO:0005737 ... P0AFP6 14519207
    36735 1nmo:C (2.2) BS01 FE ? GO:0005737 ... P0AFP6 14519207
    36736 1nmo:C (2.2) BS02 FE ? GO:0005737 ... P0AFP6 14519207
    36737 1nmo:D (2.2) BS01 FE ? GO:0005737 ... P0AFP6 14519207
    36738 1nmo:D (2.2) BS02 FE ? GO:0005737 ... P0AFP6 14519207
    36739 1nmo:E (2.2) BS01 FE ? GO:0005737 ... P0AFP6 14519207
    36740 1nmo:E (2.2) BS02 FE ? GO:0005737 ... P0AFP6 14519207
    36741 1nmo:F (2.2) BS01 FE ? GO:0005737 ... P0AFP6 14519207
    36742 1nmo:F (2.2) BS02 FE ? GO:0005737 ... P0AFP6 14519207
    36743 1nmp:A (2.2) BS01 MG ? GO:0005737 ... P0AFP6 14519207
    36744 1nmp:A (2.2) BS02 MG ? GO:0005737 ... P0AFP6 14519207
    36745 1nmp:B (2.2) BS01 MG ? GO:0005737 ... P0AFP6 14519207
    36746 1nmp:C (2.2) BS01 MG ? GO:0005737 ... P0AFP6 14519207
    36747 1nmp:C (2.2) BS02 MG ? GO:0005737 ... P0AFP6 14519207
    36748 1nmp:D (2.2) BS01 MG ? GO:0005737 ... P0AFP6 14519207
    36749 1nmp:D (2.2) BS02 MG ? GO:0005737 ... P0AFP6 14519207
    36750 1nmp:E (2.2) BS01 MG ? GO:0005737 ... P0AFP6 14519207
    36751 1nmp:E (2.2) BS02 MG ? GO:0005737 ... P0AFP6 14519207
    36752 1nmp:F (2.2) BS01 MG ? GO:0005737 ... P0AFP6 14519207
    36753 1nmp:F (2.2) BS02 MG ? GO:0005737 ... P0AFP6 14519207
    36754 1nmq:A (2.4) BS01 160 3.4.22.56 GO:0001554 ... P42574 12563278
    36755 1nmq:B (2.4) BS01 160 3.4.22.56 GO:0001554 ... P42574 12563278
    36756 1nms:A (1.7) BS01 161 3.4.22.56 GO:0001554 ... P42574 12563278
    36757 1nms:B (1.7) BS01 161 3.4.22.56 GO:0001554 ... P42574 12563278
    36758 1nmu:A (2.31) BS01 GLC ? GO:0005515 ... P0AEX9 12589748
    36759 1nmu:A (2.31) BS02 GLC ? GO:0005515 ... P0AEX9 12589748
    36760 1nmu:A (2.31) BS03 GLC ? GO:0005515 ... P0AEX9 12589748
    36761 1nmu:A (2.31) BS04 GLC ? GO:0005515 ... P0AEX9 12589748
    36762 1nmu:C (2.31) BS01 GLC ? GO:0005515 ... P0AEX9 12589748
    36763 1nmu:C (2.31) BS02 GLC ? GO:0005515 ... P0AEX9 12589748
    36764 1nmu:C (2.31) BS03 GLC ? GO:0005515 ... P0AEX9 12589748
    36765 1nmu:C (2.31) BS04 GLC ? GO:0005515 ... P0AEX9 12589748
    36766 1nmw:A (-1.00) BS01 SO4 5.2.1.8 GO:0003755 ... Q13526 12721297
    36767 1nmx:A (1.7) BS01 FDM 2.7.4.9 GO:0004798 ... P23919 12614151
    36768 1nmx:A (1.7) BS02 ADP 2.7.4.9 GO:0004798 ... P23919 12614151
    36769 1nmy:A (1.6) BS01 FDM 2.7.4.9 GO:0004798 ... P23919 12614151
    36770 1nmy:A (1.6) BS02 ADP 2.7.4.9 GO:0004798 ... P23919 12614151
    36771 1nmy:A (1.6) BS03 ANP 2.7.4.9 GO:0004798 ... P23919 12614151
    36772 1nmz:A (1.75) BS01 NYM 2.7.4.9 GO:0004798 ... P23919 12614151
    36773 1nmz:A (1.75) BS02 ANP 2.7.4.9 GO:0004798 ... P23919 12614151
    36774 1nn0:A (1.6) BS01 2DT 2.7.4.9 GO:0004798 ... P23919 12614151
    36775 1nn0:A (1.6) BS02 ADP 2.7.4.9 GO:0004798 ... P23919 12614151
    36776 1nn1:A (1.9) BS01 2DT 2.7.4.9 GO:0004798 ... P23919 12614151
    36777 1nn1:A (1.9) BS02 ANP 2.7.4.9 GO:0004798 ... P23919 12614151
    36778 1nn2:A (2.2) BS01 CA 3.2.1.18 GO:0004308 ... P06820 1920428
    36779 1nn3:A (1.55) BS01 2DT 2.7.4.9 GO:0004798 ... P23919 12614151
    36780 1nn3:A (1.55) BS02 ADP 2.7.4.9 GO:0004798 ... P23919 12614151
    36781 1nn5:A (1.5) BS01 2DT 2.7.4.9 GO:0004798 ... P23919 12614151
    36782 1nn5:A (1.5) BS02 ANP 2.7.4.9 GO:0004798 ... P23919 12614151
    36783 1nn7:A (2.1) BS01 ZN ? GO:0005249 ... Q63881 12835418
    36784 1nna:A (2.5) BS01 CA 3.2.1.18 GO:0004308 ... P03472 8371267
    36785 1nnb:A (2.8) BS01 CA 3.2.1.18 GO:0004308 ... P03472 8371267
    36786 1nnb:A (2.8) BS02 DAN 3.2.1.18 GO:0004308 ... P03472 8371267 BindingDB: IC50=13000nM
    36787 1nnc:A (1.8) BS01 CA 3.2.1.18 GO:0004308 ... P03472 7549872
    36788 1nnc:A (1.8) BS02 ZMR 3.2.1.18 GO:0004308 ... P03472 7549872
    36789 1nne:A (3.11) BS01 dna ? GO:0003684 ... Q56215 12582174
    36790 1nne:A (3.11) BS02 dna ? GO:0003684 ... Q56215 12582174
    36791 1nne:A (3.11) BS03 BEF ? GO:0003684 ... Q56215 12582174
    36792 1nne:A (3.11) BS04 ADP ? GO:0003684 ... Q56215 12582174
    36793 1nne:B (3.11) BS01 dna ? GO:0003684 ... Q56215 12582174
    36794 1nne:B (3.11) BS02 dna ? GO:0003684 ... Q56215 12582174
    36795 1nne:B (3.11) BS03 BEF ? GO:0003684 ... Q56215 12582174
    36796 1nne:B (3.11) BS04 ADP ? GO:0003684 ... Q56215 12582174
    36797 1nnf:A (1.1) BS01 FE ? GO:0042597 ... P35755 12533539
    36798 1nnf:A (1.1) BS02 EDT ? GO:0042597 ... P35755 12533539
    36799 1nni:1 (2.5) BS01 FMN 1.7.-.- GO:0005829 ... O07529 N/A
    36800 1nnj:A (1.9) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 16243784

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).