SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    368201 5kgm:A (2.95) BS02 ZN 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368202 5kgm:B (2.95) BS01 MN 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368203 5kgm:B (2.95) BS02 ZN 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368204 5kgn:A (1.95) BS01 peptide 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368205 5kgn:A (1.95) BS02 MG 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368206 5kgn:A (1.95) BS03 MN 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368207 5kgn:A (1.95) BS04 ZN 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368208 5kgn:B (1.95) BS01 peptide 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368209 5kgn:B (1.95) BS02 MG 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368210 5kgn:B (1.95) BS03 MN 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368211 5kgn:B (1.95) BS04 ZN 5.4.2.12 GO:0003824 ... G5EFZ1 28368002
    368212 5kgo:A (2.9) BS01 C2E ? GO:0000166 ... G3FT00 N/A
    368213 5kgo:A (2.9) BS02 C2E ? GO:0000166 ... G3FT00 N/A
    368214 5kgo:D (2.9) BS01 C2E ? GO:0000166 ... G3FT00 N/A
    368215 5kgo:D (2.9) BS02 C2E ? GO:0000166 ... G3FT00 N/A
    368216 5kgp:A (1.8) BS01 PA1 ? GO:0016746 ... Q97ML2 27348258
    368217 5kgp:A (1.8) BS02 GCS ? GO:0016746 ... Q97ML2 27348258
    368218 5kgp:A (1.8) BS03 ACO ? GO:0016746 ... Q97ML2 27348258 MOAD: Ki=3uM
    368219 5kgp:A (1.8) BS04 COA ? GO:0016746 ... Q97ML2 27348258
    368220 5kgp:A (1.8) BS05 COA ? GO:0016746 ... Q97ML2 27348258
    368221 5kgp:B (1.8) BS01 PA1 ? GO:0016746 ... Q97ML2 27348258
    368222 5kgp:B (1.8) BS02 GCS ? GO:0016746 ... Q97ML2 27348258
    368223 5kgp:B (1.8) BS03 ACO ? GO:0016746 ... Q97ML2 27348258 MOAD: Ki=3uM
    368224 5kgp:B (1.8) BS04 COA ? GO:0016746 ... Q97ML2 27348258
    368225 5kgs:A (2.1) BS01 PLP 2.6.1.62 GO:0004015 ... P0A4X7 28594172
    368226 5kgs:A (2.1) BS02 6SR 2.6.1.62 GO:0004015 ... P0A4X7 28594172 MOAD: Kd=74nM
    368227 5kgs:A (2.1) BS03 6SR 2.6.1.62 GO:0004015 ... P0A4X7 28594172 MOAD: Kd=74nM
    368228 5kgs:B (2.1) BS01 6SR 2.6.1.62 GO:0004015 ... P0A4X7 28594172 MOAD: Kd=74nM
    368229 5kgs:B (2.1) BS02 PLP 2.6.1.62 GO:0004015 ... P0A4X7 28594172
    368230 5kgs:B (2.1) BS03 6SR 2.6.1.62 GO:0004015 ... P0A4X7 28594172 MOAD: Kd=74nM
    368231 5kgt:A (2.25) BS01 PLP 2.6.1.62 GO:0004015 ... P0A4X7 28594172
    368232 5kgt:A (2.25) BS02 6SQ 2.6.1.62 GO:0004015 ... P0A4X7 28594172
    368233 5kgt:B (2.25) BS01 PLP 2.6.1.62 GO:0004015 ... P0A4X7 28594172
    368234 5kgt:B (2.25) BS02 6SQ 2.6.1.62 GO:0004015 ... P0A4X7 28594172
    368235 5kgt:B (2.25) BS03 PLP 2.6.1.62 GO:0004015 ... P0A4X7 28594172
    368236 5kgu:A (1.9) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    368237 5kgu:A (1.9) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    368238 5kgw:A (2.34) BS01 7SK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 27568085
    368239 5kgx:A (2.67) BS01 7SK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 27568085
    368240 5kh0:A (2.8) BS01 SF4 ? GO:0002098 ... A6LMQ7 28553946
    368241 5kh0:B (2.8) BS01 SF4 ? GO:0002098 ... A6LMQ7 28553946
    368242 5kh0:C (2.8) BS01 SF4 ? GO:0002098 ... A6LMQ7 28553946
    368243 5kh0:D (2.8) BS01 SF4 ? GO:0002098 ... A6LMQ7 28553946
    368244 5kh3:A (1.6) BS01 ZN 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676
    368245 5kh3:A (1.6) BS02 ZN 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676
    368246 5kh3:A (1.6) BS03 ZN 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676
    368247 5kh3:A (1.6) BS04 6U6 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676 BindingDB: IC50=55000nM, Kd=60000nM
    368248 5kh4:A (3.2) BS01 FPP 2.5.1.- GO:0000287 ... Q97SR4 27379833
    368249 5kh4:B (3.2) BS01 FPP 2.5.1.- GO:0000287 ... Q97SR4 27379833
    368250 5kh5:B (2.63) BS01 6TC 2.5.1.- GO:0000287 ... Q97SR4 27379833
    368251 5kh6:A (2.05) BS01 6SU 2.1.1.366 N/A Q15047 N/A
    368252 5kh7:A (1.7) BS01 ZN 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676
    368253 5kh7:A (1.7) BS02 ZN 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676
    368254 5kh7:A (1.7) BS03 ZN 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676
    368255 5kh7:A (1.7) BS04 6T7 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676 BindingDB: Kd=210000nM, IC50=350000nM
    368256 5kh9:A (1.07) BS01 ZN 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676
    368257 5kh9:A (1.07) BS02 ZN 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676
    368258 5kh9:A (1.07) BS03 ZN 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676
    368259 5kh9:A (1.07) BS04 6T5 3.5.1.-
    3.5.1.98
    GO:0008270 ... Q9UBN7 29019676
    368260 5kha:A (2.1) BS01 ADP 6.3.5.1 GO:0003952 ... V5VHL3 N/A
    368261 5kha:A (2.1) BS02 ADP 6.3.5.1 GO:0003952 ... V5VHL3 N/A
    368262 5kha:B (2.1) BS01 ADP 6.3.5.1 GO:0003952 ... V5VHL3 N/A
    368263 5kha:B (2.1) BS02 ADP 6.3.5.1 GO:0003952 ... V5VHL3 N/A
    368264 5khd:A (1.7501) BS01 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    368265 5khd:A (1.7501) BS02 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    368266 5khd:A (1.7501) BS03 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    368267 5khd:A (1.7501) BS04 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    368268 5khd:R (1.7501) BS01 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    368269 5khd:R (1.7501) BS02 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    368270 5khd:R (1.7501) BS03 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    368271 5khd:R (1.7501) BS04 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    368272 5khg:A (2.241) BS01 CC7 ? N/A O88703 27568927 MOAD: Kd=20.23uM
    368273 5khh:A (1.77) BS01 6SW ? N/A O88703 27568927 MOAD: Kd=49.32uM
    368274 5khi:A (2.1) BS01 6SX ? N/A O88703 27568927 MOAD: Kd=0.17uM
    368275 5khj:A (2.01) BS01 6SY ? N/A O88703 27568927 MOAD: Kd=1.33uM
    368276 5khj:B (2.01) BS01 6SY ? N/A O88703 27568927 MOAD: Kd=1.33uM
    368277 5khk:A (2.07) BS01 6SZ ? N/A O88703 27568927 MOAD: Kd=0.41uM
    368278 5khl:B (2.397) BS01 SO4 ? N/A A0A0H3AE70 N/A
    368279 5khm:A (1.48) BS01 XNH ? N/A O60885 27528113 MOAD: Ki=5.012nM
    BindingDB: Ki=126nM, IC50=20nM
    368280 5khm:B (1.48) BS01 XNH ? N/A O60885 27528113 BindingDB: Ki=126nM, IC50=20nM
    368281 5kho:C (2.78) BS01 MG 3.6.5.2 GO:0003924 ... P61224 27839947
    368282 5kho:C (2.78) BS02 GNP 3.6.5.2 GO:0003924 ... P61224 27839947
    368283 5kho:D (2.78) BS01 MG 3.6.5.2 GO:0003924 ... P61224 27839947
    368284 5kho:D (2.78) BS02 GNP 3.6.5.2 GO:0003924 ... P61224 27839947
    368285 5khp:A (2.65) BS01 7K9 ? GO:0005506 ... P80188 27802058
    368286 5khp:B (2.65) BS01 7K9 ? GO:0005506 ... P80188 27802058
    368287 5khp:C (2.65) BS01 7K9 ? GO:0005506 ... P80188 27802058
    368288 5khw:A (2.47) BS01 ADP 2.7.10.2 GO:0004672 ... P23458 27827355
    368289 5khw:A (2.47) BS02 MG 2.7.10.2 GO:0004672 ... P23458 27827355
    368290 5khw:B (2.47) BS01 ADP 2.7.10.2 GO:0004672 ... P23458 27827355
    368291 5khw:B (2.47) BS02 MG 2.7.10.2 GO:0004672 ... P23458 27827355
    368292 5khx:A (2.4) BS01 6TE 2.7.10.2 GO:0004672 ... P23458 27827355 BindingDB: IC50=90nM
    368293 5ki6:A (2.153) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 27387838
    368294 5ki9:A (1.6) BS01 TFA ? GO:0005576 ... Q8WTQ1 N/A
    368295 5kia:A (2.1) BS01 ZN 1.1.1.103 GO:0005737 ... Q2T9E1 N/A
    368296 5kia:A (2.1) BS02 CA 1.1.1.103 GO:0005737 ... Q2T9E1 N/A
    368297 5kic:A (2.7) BS01 4OL ? GO:0005506 ... P80188 28837177
    368298 5kic:B (2.7) BS01 4OL ? GO:0005506 ... P80188 28837177
    368299 5kic:C (2.7) BS01 4OL ? GO:0005506 ... P80188 28837177
    368300 5kid:A (2.15) BS01 7K9 ? GO:0005506 ... P80188 27802058
    368301 5kid:B (2.15) BS01 7K9 ? GO:0005506 ... P80188 27802058
    368302 5kid:C (2.15) BS01 7K9 ? GO:0005506 ... P80188 27802058
    368303 5kij:A (1.649) BS01 MAN 3.2.1.113 GO:0004571 ... Q9UKM7 27856750
    368304 5kij:A (1.649) BS02 MAN 3.2.1.113 GO:0004571 ... Q9UKM7 27856750
    368305 5kij:A (1.649) BS03 MAN 3.2.1.113 GO:0004571 ... Q9UKM7 27856750
    368306 5kij:A (1.649) BS04 MAN 3.2.1.113 GO:0004571 ... Q9UKM7 27856750
    368307 5kij:A (1.649) BS05 1PS 3.2.1.113 GO:0004571 ... Q9UKM7 27856750
    368308 5kik:A (2.2) BS01 FE 1.14.99.65 GO:0016491 ... F2RB80 27668828
    368309 5kik:A (2.2) BS02 FE 1.14.99.65 GO:0016491 ... F2RB80 27668828
    368310 5kil:A (2.72) BS01 FEO 1.14.99.65 GO:0016491 ... F2RB80 27668828
    368311 5kiq:A (1.638) BS01 SIA ? N/A A3CM52 27685666
    368312 5kiq:A (1.638) BS02 CA ? N/A A3CM52 27685666
    368313 5kiq:A (1.638) BS03 CA ? N/A A3CM52 27685666
    368314 5kiq:B (1.638) BS01 CA ? N/A A3CM52 27685666
    368315 5kiq:B (1.638) BS02 CA ? N/A A3CM52 27685666
    368316 5kir:A (2.697) BS01 RCX 1.14.99.1 GO:0001516 ... P35354 27710942 BindingDB: IC50=500nM, Ki=530nM
    368317 5kir:A (2.697) BS02 COH 1.14.99.1 GO:0001516 ... P35354 27710942
    368318 5kir:B (2.697) BS01 RCX 1.14.99.1 GO:0001516 ... P35354 27710942 BindingDB: IC50=500nM, Ki=530nM
    368319 5kir:B (2.697) BS02 COH 1.14.99.1 GO:0001516 ... P35354 27710942
    368320 5kis:A (2.4) BS01 CA ? GO:0005515 ... B6A880 N/A
    368321 5kit:A (1.6) BS01 6TA 2.4.2.12 GO:0005125 ... P43490 27541271 MOAD: ic50=0.013uM
    BindingDB: IC50=47.9nM
    368322 5kit:B (1.6) BS01 6TA 2.4.2.12 GO:0005125 ... P43490 27541271 MOAD: ic50=0.013uM
    BindingDB: IC50=47.9nM
    368323 5kiv:A (1.75) BS01 ZN 3.2.1.- GO:0016798 ... P67344 27345688
    368324 5kiw:A (3.41) BS01 ANP 3.6.4.6 GO:0005524 ... P55072 29238611
    368325 5kiw:B (3.41) BS01 ANP 3.6.4.6 GO:0005524 ... P55072 29238611
    368326 5kiw:B (3.41) BS02 MG 3.6.4.6 GO:0005524 ... P55072 29238611
    368327 5kix:A (1.75) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    368328 5kix:A (1.75) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    368329 5kiy:A (2.79) BS01 ANP 3.6.4.6 GO:0005524 ... P55072 29238611
    368330 5kj0:A (1.51) BS01 6TB ? N/A O60885 27862999 MOAD: ic50=130nM
    BindingDB: IC50=100nM
    368331 5kj1:A (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 36189742
    368332 5kj1:A (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 36189742
    368333 5kj1:A (1.2) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 36189742
    368334 5kj1:A (1.2) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 36189742
    368335 5kj1:B (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 36189742
    368336 5kj1:B (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 36189742
    368337 5kj1:B (1.2) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 36189742
    368338 5kj1:B (1.2) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 36189742
    368339 5kj2:A (1.95) BS01 6TF 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 28953875 BindingDB: IC50=60nM
    368340 5kj4:A (3.35) BS01 CA ? GO:0005509 ... Q99PJ1 27857071
    368341 5kj4:A (3.35) BS02 CA ? GO:0005509 ... Q99PJ1 27857071
    368342 5kj4:A (3.35) BS03 CA ? GO:0005509 ... Q99PJ1 27857071
    368343 5kj4:B (3.35) BS01 CA ? GO:0005509 ... Q99PJ1 27857071
    368344 5kj4:B (3.35) BS02 CA ? GO:0005509 ... Q99PJ1 27857071
    368345 5kj4:B (3.35) BS03 CA ? GO:0005509 ... Q99PJ1 27857071
    368346 5kj4:C (3.35) BS01 CA ? GO:0005509 ... Q99PJ1 27857071
    368347 5kj4:C (3.35) BS02 CA ? GO:0005509 ... Q99PJ1 27857071
    368348 5kj4:C (3.35) BS03 CA ? GO:0005509 ... Q99PJ1 27857071
    368349 5kj4:D (3.35) BS01 CA ? GO:0005509 ... Q99PJ1 27857071
    368350 5kj4:D (3.35) BS02 CA ? GO:0005509 ... Q99PJ1 27857071
    368351 5kj4:D (3.35) BS03 CA ? GO:0005509 ... Q99PJ1 27857071
    368352 5kj5:A (2.113) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368353 5kj5:B (2.113) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368354 5kj5:C (2.113) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368355 5kj5:D (2.113) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368356 5kj6:A (1.14) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 29271062
    368357 5kj6:A (1.14) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 29271062
    368358 5kj6:A (1.14) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 29271062
    368359 5kj6:A (1.14) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 29271062
    368360 5kj6:B (1.14) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 29271062
    368361 5kj6:B (1.14) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 29271062
    368362 5kj6:B (1.14) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 29271062
    368363 5kj6:B (1.14) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 29271062
    368364 5kj7:E (3.5) BS01 CA ? GO:0016020 ... P21707 27731796
    368365 5kj7:E (3.5) BS02 CA ? GO:0016020 ... P21707 27731796
    368366 5kj7:E (3.5) BS03 CA ? GO:0016020 ... P21707 27731796
    368367 5kj7:E (3.5) BS04 CA ? GO:0016020 ... P21707 27731796
    368368 5kj7:F (3.5) BS01 CA ? GO:0016020 ... P21707 27731796
    368369 5kj7:F (3.5) BS02 CA ? GO:0016020 ... P21707 27731796
    368370 5kj7:F (3.5) BS03 CA ? GO:0016020 ... P21707 27731796
    368371 5kj7:K (3.5) BS01 CA ? GO:0016020 ... P21707 27731796
    368372 5kj7:K (3.5) BS02 CA ? GO:0016020 ... P21707 27731796
    368373 5kj7:K (3.5) BS03 CA ? GO:0016020 ... P21707 27731796
    368374 5kj7:K (3.5) BS04 CA ? GO:0016020 ... P21707 27731796
    368375 5kj8:E (4.1) BS01 CA ? GO:0016020 ... P21707 27731796
    368376 5kj8:E (4.1) BS02 CA ? GO:0016020 ... P21707 27731796
    368377 5kj8:E (4.1) BS03 CA ? GO:0016020 ... P21707 27731796
    368378 5kj8:E (4.1) BS04 CA ? GO:0016020 ... P21707 27731796
    368379 5kj8:F (4.1) BS01 CA ? GO:0016020 ... P21707 27731796
    368380 5kj8:F (4.1) BS02 CA ? GO:0016020 ... P21707 27731796
    368381 5kj8:F (4.1) BS03 CA ? GO:0016020 ... P21707 27731796
    368382 5kj8:F (4.1) BS04 CA ? GO:0016020 ... P21707 27731796
    368383 5kj8:K (4.1) BS01 CA ? GO:0016020 ... P21707 27731796
    368384 5kj8:K (4.1) BS02 CA ? GO:0016020 ... P21707 27731796
    368385 5kj8:K (4.1) BS03 CA ? GO:0016020 ... P21707 27731796
    368386 5kj8:K (4.1) BS04 CA ? GO:0016020 ... P21707 27731796
    368387 5kja:A (2.8) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 27453555
    368388 5kja:B (2.8) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 27453555
    368389 5kja:C (2.8) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 27453555
    368390 5kja:D (2.8) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 27453555
    368391 5kja:E (2.8) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 27453555
    368392 5kjb:A (2.81) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 27453555
    368393 5kjb:B (2.81) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 27453555
    368394 5kjb:C (2.81) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 27453555
    368395 5kjb:D (2.81) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 27453555
    368396 5kjb:E (2.81) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 27453555
    368397 5kjc:A (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 29271062
    368398 5kjc:A (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 29271062
    368399 5kjc:A (1.2) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 29271062
    368400 5kjc:A (1.2) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 29271062

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).