SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    369601 5ks9:C (2.55) BS01 peptide ? GO:0006955 ... L8E864 27568928
    369602 5ks9:C (2.55) BS02 CA ? GO:0006955 ... L8E864 27568928
    369603 5ks9:D (2.55) BS01 peptide ? GO:0006955 ... A0A0U5Q247
    R9XSW3
    27568928
    369604 5ks9:E (2.55) BS01 peptide ? GO:0002250 ... A0A0B4J274
    P01848
    27568928
    369605 5ks9:E (2.55) BS02 CA ? GO:0002250 ... A0A0B4J274
    P01848
    27568928
    369606 5ks9:F (2.55) BS01 peptide ? GO:0002376 ... A0A580
    A0A5B9
    27568928
    369607 5ks9:G (2.55) BS01 peptide ? GO:0002250 ... A0A0B4J274
    P01848
    27568928
    369608 5ks9:G (2.55) BS02 CA ? GO:0002250 ... A0A0B4J274
    P01848
    27568928
    369609 5ks9:H (2.55) BS01 peptide ? GO:0002376 ... A0A580
    A0A5B9
    27568928
    369610 5ksa:A (2.0) BS01 peptide ? GO:0006955 ... P01909 27568928
    369611 5ksa:B (2.0) BS01 peptide ? GO:0006955 ... A0A0U5Q247
    P08079
    27568928
    369612 5ksa:C (2.0) BS01 peptide ? GO:0002250 ... A0A0B4J274
    P01848
    27568928
    369613 5ksa:D (2.0) BS01 peptide ? GO:0002376 ... A0A580
    A0A5B9
    27568928
    369614 5ksb:A (2.9) BS01 peptide ? GO:0006955 ... P01909 27568928
    369615 5ksb:B (2.9) BS01 peptide ? GO:0006955 ... A0A0U5Q247
    P08079
    27568928
    369616 5ksb:C (2.9) BS01 peptide ? GO:0006955 ... P01909 27568928
    369617 5ksb:D (2.9) BS01 peptide ? GO:0006955 ... A0A0U5Q247
    P08079
    27568928
    369618 5ksb:E (2.9) BS01 peptide ? GO:0002250 ... A0A0B4J274
    P01848
    27568928
    369619 5ksb:F (2.9) BS01 peptide ? GO:0002376 ... A0A580
    A0A5B9
    27568928
    369620 5ksb:G (2.9) BS01 peptide ? GO:0002250 ... A0A0B4J274
    P01848
    27568928
    369621 5ksb:H (2.9) BS01 peptide ? GO:0002376 ... A0A580
    A0A5B9
    27568928
    369622 5ksc:A (2.1) BS01 AZR 3.5.2.6 GO:0008800 ... Q47066 27795378
    369623 5ksd:A (3.5) BS01 ACP 7.1.2.1 GO:0000166 ... P19456 28443028
    369624 5ksd:B (3.5) BS01 ACP 7.1.2.1 GO:0000166 ... P19456 28443028
    369625 5kse:A (2.105) BS01 dna 3.1.-.- GO:0003677 ... P39748 28653660
    369626 5kse:A (2.105) BS02 dna 3.1.-.- GO:0003677 ... P39748 28653660
    369627 5kse:A (2.105) BS03 dna 3.1.-.- GO:0003677 ... P39748 28653660
    369628 5ksf:A (1.75) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369629 5ksf:A (1.75) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369630 5ksf:B (1.75) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369631 5ksf:B (1.75) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369632 5ksg:A (1.62) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369633 5ksg:A (1.62) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369634 5ksg:A (1.62) BS03 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369635 5ksg:B (1.62) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369636 5ksg:B (1.62) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369637 5ksg:B (1.62) BS03 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369638 5ksg:B (1.62) BS04 NIZ 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369639 5ksi:A (1.8) BS01 HEM ? GO:0004601 ... P69905 29127281
    369640 5ksi:A (1.8) BS02 S1P ? GO:0004601 ... P69905 29127281
    369641 5ksi:A (1.8) BS03 S1P ? GO:0004601 ... P69905 29127281
    369642 5ksi:A (1.8) BS04 S1P ? GO:0004601 ... P69905 29127281
    369643 5ksi:B (1.8) BS01 HEM ? GO:0004601 ... P68871 29127281
    369644 5ksi:B (1.8) BS02 S1P ? GO:0004601 ... P68871 29127281
    369645 5ksi:C (1.8) BS01 HEM ? GO:0004601 ... P69905 29127281
    369646 5ksi:C (1.8) BS02 S1P ? GO:0004601 ... P69905 29127281
    369647 5ksi:C (1.8) BS03 S1P ? GO:0004601 ... P69905 29127281
    369648 5ksi:D (1.8) BS01 S1P ? GO:0004601 ... P68871 29127281
    369649 5ksi:D (1.8) BS02 HEM ? GO:0004601 ... P68871 29127281
    369650 5ksi:D (1.8) BS03 S1P ? GO:0004601 ... P68871 29127281
    369651 5ksj:A (2.4) BS01 HEM ? GO:0004601 ... P69905 29127281
    369652 5ksj:B (2.4) BS01 HEM ? GO:0004601 ... P68871 29127281
    369653 5ksj:C (2.4) BS01 HEM ? GO:0004601 ... P69905 29127281
    369654 5ksj:D (2.4) BS01 HEM ? GO:0004601 ... P68871 29127281
    369655 5ksk:A (1.69) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369656 5ksk:A (1.69) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369657 5ksk:B (1.69) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369658 5ksk:B (1.69) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369659 5ksn:A (1.87) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369660 5ksn:A (1.87) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369661 5ksn:A (1.87) BS03 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369662 5ksn:A (1.87) BS04 NIZ 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369663 5ksn:B (1.87) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369664 5ksn:B (1.87) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369665 5ksn:B (1.87) BS03 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369666 5ksn:B (1.87) BS04 NIZ 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369667 5kso:A (2.25) BS01 GDP 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369668 5ksp:A (2.162) BS01 GDP 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369669 5ksp:B (2.162) BS01 GDP 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369670 5ksq:A (2.63) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369671 5ksq:B (2.63) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369672 5ksr:A (1.96) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369673 5ksr:B (1.96) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369674 5ksr:C (1.96) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369675 5ksr:D (1.96) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369676 5kss:A (2.82) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369677 5kss:B (2.82) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369678 5kst:A (2.759) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369679 5kst:B (2.759) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369680 5kst:C (2.759) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369681 5kst:D (2.759) BS01 MN 3.1.3.5 GO:0000166 ... Q9PF20 28677327
    369682 5ksu:A (2.73) BS01 peptide ? GO:0006955 ... P01909 28364043
    369683 5ksu:B (2.73) BS01 peptide ? GO:0006955 ... Q5Y7D3 28364043
    369684 5ksu:D (2.73) BS01 peptide ? GO:0006955 ... P01909 28364043
    369685 5ksu:E (2.73) BS01 peptide ? GO:0006955 ... Q5Y7D3 28364043
    369686 5ksv:A (2.195) BS01 peptide ? GO:0006955 ... P01909 28364043
    369687 5ksv:B (2.195) BS01 peptide ? GO:0006955 ... Q5Y7D3 28364043
    369688 5ksw:A (2.47) BS01 FMN 1.3.1.14 GO:0004152 ... Q9CFW8 N/A
    369689 5ksw:B (2.47) BS01 FAD ? GO:0006221 ... Q9CFW7 N/A
    369690 5ksw:B (2.47) BS02 FES ? GO:0006221 ... Q9CFW7 N/A
    369691 5ksw:C (2.47) BS01 FMN 1.3.1.14 GO:0004152 ... Q9CFW8 N/A
    369692 5ksw:D (2.47) BS01 FAD ? GO:0006221 ... Q9CFW7 N/A
    369693 5ksw:D (2.47) BS02 FES ? GO:0006221 ... Q9CFW7 N/A
    369694 5ksx:F (2.65) BS01 PO4 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018
    369695 5ksx:F (2.65) BS02 7AM 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 BindingDB: IC50=3700nM
    369696 5ksx:F (2.65) BS03 7AM 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 BindingDB: IC50=3700nM
    369697 5ksy:A (2.482) BS01 GDP 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369698 5ksz:A (2.5) BS01 MG 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369699 5ksz:A (2.5) BS02 MG 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369700 5kt1:A (2.015) BS01 4MI ? GO:0004497 ... Q2IU02 N/A
    369701 5kt1:A (2.015) BS02 HEM ? GO:0004497 ... Q2IU02 N/A
    369702 5kt2:A (2.488) BS01 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369703 5kt2:A (2.488) BS02 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369704 5kt2:A (2.488) BS03 0KX 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369705 5kt2:A (2.488) BS04 MG 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369706 5kt2:A (2.488) BS05 MG 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369707 5kt2:A (2.488) BS06 MG 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369708 5kt3:A (2.64) BS01 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369709 5kt3:A (2.64) BS02 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369710 5kt3:A (2.64) BS03 0KX 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369711 5kt3:A (2.64) BS04 MN 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369712 5kt3:A (2.64) BS05 MN 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369713 5kt3:A (2.64) BS06 MN 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369714 5kt4:A (2.78) BS01 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369715 5kt4:A (2.78) BS02 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369716 5kt4:A (2.78) BS03 0KX 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369717 5kt4:A (2.78) BS04 MG 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369718 5kt5:A (2.798) BS01 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369719 5kt5:A (2.798) BS02 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369720 5kt5:A (2.798) BS03 MN 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369721 5kt5:A (2.798) BS04 0KX 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369722 5kt5:A (2.798) BS05 MN 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369723 5kt6:A (3.54) BS01 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369724 5kt6:A (3.54) BS02 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369725 5kt6:A (3.54) BS03 0KX 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369726 5kt6:A (3.54) BS04 MG 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369727 5kt6:A (3.54) BS05 MG 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369728 5kt7:A (3.151) BS01 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369729 5kt7:A (3.151) BS02 dna 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369730 5kt7:A (3.151) BS03 MN 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369731 5kt7:A (3.151) BS04 0KX 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369732 5kt7:A (3.151) BS05 MN 2.7.7.7 GO:0003684 ... Q9UNA4 27555320
    369733 5kt8:A (2.0) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369734 5kt8:A (2.0) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369735 5kt8:B (2.0) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369736 5kt8:B (2.0) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369737 5kt8:B (2.0) BS03 NIZ 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369738 5kt9:A (1.88) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369739 5kt9:A (1.88) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369740 5kt9:B (1.88) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369741 5kt9:B (1.88) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369742 5ktc:A (1.8) BS01 FUH ? GO:0016747 ... V5RDR9 27404806
    369743 5ktc:A (1.8) BS02 COA ? GO:0016747 ... V5RDR9 27404806
    369744 5ktc:A (1.8) BS03 MG ? GO:0016747 ... V5RDR9 27404806
    369745 5ktd:A (1.9) BS01 QUH ? GO:0016747 ... V5RDR9 27404806
    369746 5ktd:A (1.9) BS02 COA ? GO:0016747 ... V5RDR9 27404806
    369747 5ktd:A (1.9) BS03 MG ? GO:0016747 ... V5RDR9 27404806
    369748 5kth:A (2.21) BS01 GLC ? N/A E1BHM0 27542410
    369749 5kth:A (2.21) BS02 GLC ? N/A E1BHM0 27542410
    369750 5kth:A (2.21) BS03 CA ? N/A E1BHM0 27542410
    369751 5kth:A (2.21) BS04 CA ? N/A E1BHM0 27542410
    369752 5kth:A (2.21) BS05 CA ? N/A E1BHM0 27542410
    369753 5kti:A (1.8) BS01 GLC ? N/A E1BHM0 27542410
    369754 5kti:A (1.8) BS02 GLC ? N/A E1BHM0 27542410
    369755 5kti:A (1.8) BS03 CA ? N/A E1BHM0 27542410
    369756 5kti:A (1.8) BS04 CA ? N/A E1BHM0 27542410
    369757 5kti:A (1.8) BS05 CA ? N/A E1BHM0 27542410
    369758 5ktk:A (1.98) BS01 NDP ? N/A P40806 N/A
    369759 5ktl:A (1.92) BS01 MN 4.3.3.7 GO:0005737 ... Q3M723 27845445
    369760 5ktl:A (1.92) BS02 MN 4.3.3.7 GO:0005737 ... Q3M723 27845445
    369761 5ktl:B (1.92) BS01 MN 4.3.3.7 GO:0005737 ... Q3M723 27845445
    369762 5ktm:A (1.44) BS01 SF4 2.5.1.72 GO:0005737 ... O57767 27404889
    369763 5ktn:A (1.34) BS01 SF4 2.5.1.72 GO:0005737 ... O57767 27404889
    369764 5kto:A (1.442) BS01 SF4 2.5.1.72 GO:0005737 ... O57767 27404889
    369765 5kto:A (1.442) BS02 NTM 2.5.1.72 GO:0005737 ... O57767 27404889
    369766 5ktp:A (1.542) BS01 SF4 2.5.1.72 GO:0005737 ... O57767 27404889
    369767 5ktp:A (1.542) BS02 ITN 2.5.1.72 GO:0005737 ... O57767 27404889
    369768 5ktq:A (2.5) BS01 DCP 2.7.7.7 GO:0001882 ... P19821 9605316
    369769 5ktr:A (1.34) BS01 SF4 2.5.1.72 GO:0005737 ... O57767 27404889
    369770 5kts:A (1.34) BS01 SF4 2.5.1.72 GO:0005737 ... O57767 27404889
    369771 5kts:A (1.34) BS02 CIZ 2.5.1.72 GO:0005737 ... O57767 27404889
    369772 5ktt:A (1.5) BS01 SF4 2.5.1.72 GO:0005737 ... O57767 27404889
    369773 5ktu:A (1.38) BS01 6XB 2.3.1.-
    2.3.1.48
    N/A Q92793 27682507 BindingDB: IC50=620nM
    369774 5ktu:B (1.38) BS01 6XB 2.3.1.-
    2.3.1.48
    N/A Q92793 27682507 BindingDB: IC50=620nM
    369775 5ktw:A (1.087) BS01 6XG 2.3.1.-
    2.3.1.48
    N/A Q92793 27682507 BindingDB: IC50=20.0nM
    369776 5ktw:B (1.087) BS01 6XG 2.3.1.-
    2.3.1.48
    N/A Q92793 27682507 BindingDB: IC50=20.0nM
    369777 5ktw:C (1.087) BS01 6XG 2.3.1.-
    2.3.1.48
    N/A Q92793 27682507 BindingDB: IC50=20.0nM
    369778 5ktx:A (1.27) BS01 6XH 2.3.1.-
    2.3.1.48
    N/A Q92793 27682507 BindingDB: IC50=20nM, EC50=1900nM
    369779 5kty:A (2.522) BS01 GDP 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369780 5kty:A (2.522) BS02 GDP 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369781 5kty:A (2.522) BS03 CA 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369782 5kty:A (2.522) BS04 CA 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369783 5ku1:A (2.501) BS01 GDP 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369784 5ku1:A (2.501) BS02 MG 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369785 5ku1:A (2.501) BS03 MG 3.6.5.- GO:0003924 ... Q8IXI2 27605430
    369786 5ku3:A (1.14) BS01 6XH ? N/A O60885 27682507 BindingDB: IC50=10510nM
    369787 5ku6:A (1.8) BS01 MZM 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=6200nM, IC50=205nM
    369788 5ku6:A (1.8) BS02 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    369789 5ku6:A (1.8) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    369790 5ku6:B (1.8) BS01 MZM 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=6200nM, IC50=205nM
    369791 5ku6:B (1.8) BS02 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    369792 5ku6:B (1.8) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    369793 5ku6:B (1.8) BS04 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    369794 5ku6:C (1.8) BS01 MZM 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=6200nM, IC50=205nM
    369795 5ku6:C (1.8) BS02 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    369796 5ku6:C (1.8) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    369797 5ku6:C (1.8) BS04 SO4 4.2.1.1 GO:0004089 ... P22748 28975383
    369798 5ku6:D (1.8) BS01 MZM 4.2.1.1 GO:0004089 ... P22748 28975383 BindingDB: Ki=6200nM, IC50=205nM
    369799 5ku6:D (1.8) BS02 ZN 4.2.1.1 GO:0004089 ... P22748 28975383
    369800 5ku6:D (1.8) BS03 SO4 4.2.1.1 GO:0004089 ... P22748 28975383

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).