SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    386201 5noj:C (11.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386202 5noj:D (11.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386203 5noj:E (11.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386204 5nol:A (8.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386205 5nol:B (8.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386206 5nol:C (8.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386207 5nol:D (8.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386208 5nol:E (8.0) BS01 ADP 3.6.4.- GO:0001725 ... P68137 28607071
    386209 5non:A (1.85) BS01 93H 4.2.1.78 GO:0006952 ... Q67A25 28915025
    386210 5non:B (1.85) BS01 93H 4.2.1.78 GO:0006952 ... Q67A25 28915025
    386211 5non:C (1.85) BS01 93H 4.2.1.78 GO:0006952 ... Q67A25 28915025
    386212 5noo:A (2.9) BS01 UMP 2.1.1.45 GO:0004799 ... Q9Y052 28826032
    386213 5noo:A (2.9) BS02 D16 2.1.1.45 GO:0004799 ... Q9Y052 28826032
    386214 5noo:B (2.9) BS01 UMP 2.1.1.45 GO:0004799 ... Q9Y052 28826032
    386215 5noo:B (2.9) BS02 UMP 2.1.1.45 GO:0004799 ... Q9Y052 28826032
    386216 5noo:B (2.9) BS03 D16 2.1.1.45 GO:0004799 ... Q9Y052 28826032
    386217 5noo:C (2.9) BS01 UMP 2.1.1.45 GO:0004799 ... Q9Y052 28826032
    386218 5noo:C (2.9) BS02 D16 2.1.1.45 GO:0004799 ... Q9Y052 28826032
    386219 5noo:D (2.9) BS01 UMP 2.1.1.45 GO:0004799 ... Q9Y052 28826032
    386220 5noo:D (2.9) BS02 D16 2.1.1.45 GO:0004799 ... Q9Y052 28826032
    386221 5noq:A (1.6) BS01 93E 5.2.1.8 GO:0000413 ... P62937 28673552
    386222 5noq:A (1.6) BS02 93E 5.2.1.8 GO:0000413 ... P62937 28673552
    386223 5nor:A (1.8) BS01 93Q 5.2.1.8 GO:0000413 ... P62937 28673552
    386224 5nos:A (1.35) BS01 92Z 5.2.1.8 GO:0000413 ... P62937 28673552
    386225 5not:A (1.45) BS01 938 5.2.1.8 GO:0000413 ... P62937 28673552
    386226 5not:A (1.45) BS02 938 5.2.1.8 GO:0000413 ... P62937 28673552
    386227 5nou:A (1.3) BS01 L60 5.2.1.8 GO:0000413 ... P62937 28673552
    386228 5nou:A (1.3) BS02 L60 5.2.1.8 GO:0000413 ... P62937 28673552
    386229 5nov:A (2.0) BS01 93B 5.2.1.8 GO:0000413 ... P62937 28673552
    386230 5nox:A (1.49) BS01 L97 5.2.1.8 GO:0000413 ... P62937 28673552
    386231 5noy:A (1.43) BS01 93K 5.2.1.8 GO:0000413 ... P62937 28673552
    386232 5noz:A (1.61) BS01 L99 5.2.1.8 GO:0000413 ... P62937 28673552
    386233 5np4:A (1.434) BS01 CNC ? N/A P20062 28910388
    386234 5np6:0 (3.6) BS01 rna ? GO:0002181 ... P0A7P5 28630923
    386235 5np6:1 (3.6) BS01 rna ? GO:0002181 ... P0A7Q1 28630923
    386236 5np6:2 (3.6) BS01 rna ? GO:0002181 ... P0A7Q6 28630923
    386237 5np6:3 (3.6) BS01 rna ? GO:0003735 ... P0A7J3 28630923
    386238 5np6:4 (3.6) BS01 rna ? GO:0002181 ... P0A7M9 28630923
    386239 5np6:C (3.6) BS01 rna 5.6.2.2 N/A P23992 28630923
    386240 5np6:C (3.6) BS02 rna 5.6.2.2 N/A P23992 28630923
    386241 5np6:E (3.6) BS01 rna ? GO:0000028 ... P0A7V0 28630923
    386242 5np6:F (3.6) BS01 rna ? GO:0003676 ... P0A7V3 28630923
    386243 5np6:F (3.6) BS02 rna ? GO:0003676 ... P0A7V3 28630923
    386244 5np6:G (3.6) BS01 rna ? GO:0000028 ... P0A7V8 28630923
    386245 5np6:G (3.6) BS02 rna ? GO:0000028 ... P0A7V8 28630923
    386246 5np6:H (3.6) BS01 rna ? GO:0000028 ... P0A7W1 28630923
    386247 5np6:H (3.6) BS02 rna ? GO:0000028 ... P0A7W1 28630923
    386248 5np6:I (3.6) BS01 rna ? GO:0003735 ... P02358 28630923
    386249 5np6:J (3.6) BS01 rna ? GO:0003723 ... P02359 28630923
    386250 5np6:K (3.6) BS01 rna ? GO:0000028 ... P0A7W7 28630923
    386251 5np6:L (3.6) BS01 rna ? GO:0000049 ... P0A7X3 28630923
    386252 5np6:L (3.6) BS02 rna ? GO:0000049 ... P0A7X3 28630923
    386253 5np6:M (3.6) BS01 rna ? GO:0000049 ... P0A7R5 28630923
    386254 5np6:N (3.6) BS01 rna ? GO:0002181 ... P0A7R9 28630923
    386255 5np6:O (3.6) BS01 rna ? GO:0000049 ... P0A7S3 28630923
    386256 5np6:P (3.6) BS01 rna ? GO:0000049 ... P0A7S9 28630923
    386257 5np6:Q (3.6) BS01 rna ? GO:0003735 ... P0AG59 28630923
    386258 5np6:R (3.6) BS01 rna ? GO:0000028 ... P0ADZ4 28630923
    386259 5np6:R (3.6) BS02 rna ? GO:0000028 ... P0ADZ4 28630923
    386260 5np6:S (3.6) BS01 rna ? GO:0000028 ... P0A7T3 28630923
    386261 5np6:T (3.6) BS01 rna ? GO:0000028 ... P0AG63 28630923
    386262 5np6:U (3.6) BS01 rna ? GO:0003735 ... P0A7T7 28630923
    386263 5np6:V (3.6) BS01 rna ? GO:0003723 ... P0A7U3 28630923
    386264 5np6:W (3.6) BS01 rna ? GO:0000028 ... P0A7U7 28630923
    386265 5np6:X (3.6) BS01 rna ? GO:0000028 ... P68679 28630923
    386266 5np6:a (3.6) BS01 rna ? GO:0000027 ... P60422 28630923
    386267 5np6:a (3.6) BS02 rna ? GO:0000027 ... P60422 28630923
    386268 5np6:b (3.6) BS01 rna ? GO:0000027 ... P60438 28630923
    386269 5np6:c (3.6) BS01 rna ? GO:0001070 ... P60723 28630923
    386270 5np6:d (3.6) BS01 rna ? GO:0000027 ... P62399 28630923
    386271 5np6:d (3.6) BS02 rna ? GO:0000027 ... P62399 28630923
    386272 5np6:d (3.6) BS03 rna ? GO:0000027 ... P62399 28630923
    386273 5np6:e (3.6) BS01 rna ? GO:0000027 ... P0AG55 28630923
    386274 5np6:f (3.6) BS01 rna ? GO:0002181 ... P0A7R1 28630923
    386275 5np6:g (3.6) BS01 rna ? GO:0000027 ... P0A7J7 28630923
    386276 5np6:h (3.6) BS01 rna ? GO:0002181 ... P0AA10 28630923
    386277 5np6:i (3.6) BS01 rna ? GO:0002181 ... P0ADY3 28630923
    386278 5np6:i (3.6) BS02 rna ? GO:0002181 ... P0ADY3 28630923
    386279 5np6:j (3.6) BS01 rna ? GO:0002181 ... P02413 28630923
    386280 5np6:k (3.6) BS01 rna ? GO:0000027 ... P0ADY7 28630923
    386281 5np6:k (3.6) BS02 rna ? GO:0000027 ... P0ADY7 28630923
    386282 5np6:l (3.6) BS01 rna ? GO:0000027 ... P0AG44 28630923
    386283 5np6:m (3.6) BS01 rna ? GO:0002181 ... P0C018 28630923
    386284 5np6:m (3.6) BS02 rna ? GO:0002181 ... P0C018 28630923
    386285 5np6:n (3.6) BS01 rna ? GO:0000027 ... P0A7K6 28630923
    386286 5np6:n (3.6) BS02 rna ? GO:0000027 ... P0A7K6 28630923
    386287 5np6:o (3.6) BS01 rna ? GO:0000027 ... P0A7L3 28630923
    386288 5np6:p (3.6) BS01 rna ? GO:0002181 ... P0AG48 28630923
    386289 5np6:q (3.6) BS01 rna ? GO:0002181 ... P61175 28630923
    386290 5np6:r (3.6) BS01 rna ? GO:0000027 ... P0ADZ0 28630923
    386291 5np6:s (3.6) BS01 rna ? GO:0000027 ... P60624 28630923
    386292 5np6:t (3.6) BS01 rna ? GO:0000027 ... P68919 28630923
    386293 5np6:u (3.6) BS01 rna ? GO:0003735 ... P0A7L8 28630923
    386294 5np6:u (3.6) BS02 rna ? GO:0003735 ... P0A7L8 28630923
    386295 5np6:v (3.6) BS01 rna ? GO:0000027 ... P0A7M2 28630923
    386296 5np6:w (3.6) BS01 rna ? GO:0000027 ... P0A7M6 28630923
    386297 5np6:x (3.6) BS01 rna ? GO:0000027 ... P0AG51 28630923
    386298 5np6:y (3.6) BS01 rna ? GO:0000027 ... P0A7N4 28630923
    386299 5np6:z (3.6) BS01 rna ? GO:0000027 ... P0A7N9 28630923
    386300 5np7:A (4.2) BS01 ANP ? GO:0000150 ... Q06609 27596592
    386301 5np7:B (4.2) BS01 ANP ? GO:0000150 ... Q06609 27596592
    386302 5np7:B (4.2) BS02 ANP ? GO:0000150 ... Q06609 27596592
    386303 5np7:C (4.2) BS01 ANP ? GO:0000150 ... Q06609 27596592
    386304 5np7:C (4.2) BS02 ANP ? GO:0000150 ... Q06609 27596592
    386305 5np7:D (4.2) BS01 ANP ? GO:0000150 ... Q06609 27596592
    386306 5np7:D (4.2) BS02 ANP ? GO:0000150 ... Q06609 27596592
    386307 5np7:E (4.2) BS01 ANP ? GO:0000150 ... Q06609 27596592
    386308 5np7:E (4.2) BS02 ANP ? GO:0000150 ... Q06609 27596592
    386309 5np7:F (4.2) BS01 ANP ? GO:0000150 ... Q06609 27596592
    386310 5np7:F (4.2) BS02 ANP ? GO:0000150 ... Q06609 27596592
    386311 5np7:G (4.2) BS01 ANP ? GO:0000150 ... Q06609 27596592
    386312 5np7:G (4.2) BS02 ANP ? GO:0000150 ... Q06609 27596592
    386313 5np8:A (1.9) BS01 93T 2.7.2.3 GO:0004618 ... P00558 31401411
    386314 5np9:A (2.0) BS01 ADP ? GO:0002949 ... O05515 28890133
    386315 5np9:A (2.0) BS02 MG ? GO:0002949 ... O05515 28890133
    386316 5npb:A (1.9) BS01 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386317 5npb:A (1.9) BS02 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386318 5npb:A (1.9) BS03 93Z 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386319 5npb:A (1.9) BS04 OXL 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386320 5npc:A (1.96) BS01 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386321 5npc:A (1.96) BS02 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386322 5npc:A (1.96) BS03 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386323 5npc:A (1.96) BS04 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386324 5npc:A (1.96) BS05 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386325 5npc:A (1.96) BS06 94E 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386326 5npc:A (1.96) BS07 OXL 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386327 5npd:A (1.95) BS01 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386328 5npd:A (1.95) BS02 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386329 5npd:A (1.95) BS03 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386330 5npd:A (1.95) BS04 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386331 5npd:A (1.95) BS05 94B 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386332 5npd:A (1.95) BS06 OXL 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386333 5npe:A (1.95) BS01 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386334 5npe:A (1.95) BS02 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386335 5npe:A (1.95) BS03 SO4 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386336 5npe:A (1.95) BS04 948 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386337 5npe:A (1.95) BS05 OXL 2.4.1.161 GO:0003824 ... B3PEE6 28776021
    386338 5npf:A (1.38) BS01 CA 3.2.1.45 GO:0004348 ... F6BL85 28776021
    386339 5npf:A (1.38) BS02 945 3.2.1.45 GO:0004348 ... F6BL85 28776021
    386340 5nph:H (1.7) BS01 peptide N/A N/A N/A 28512091
    386341 5nph:L (1.7) BS01 peptide N/A N/A N/A 28512091
    386342 5npi:A (2.0) BS01 peptide N/A N/A N/A 28512091
    386343 5npi:B (2.0) BS01 peptide N/A N/A N/A 28512091
    386344 5npj:A (1.9) BS01 peptide N/A N/A N/A 28512091
    386345 5npj:B (1.9) BS01 peptide N/A N/A N/A 28512091
    386346 5npk:B (1.98) BS01 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386347 5npk:B (1.98) BS02 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386348 5npk:B (1.98) BS03 MN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386349 5npk:B (1.98) BS04 94H 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386350 5npk:B (1.98) BS05 94H 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386351 5npk:B (1.98) BS06 9JN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386352 5npk:D (1.98) BS01 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386353 5npk:D (1.98) BS02 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386354 5npk:D (1.98) BS03 MN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386355 5npk:D (1.98) BS04 94H 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386356 5npk:b (1.98) BS01 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386357 5npk:b (1.98) BS02 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386358 5npk:b (1.98) BS03 MN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386359 5npk:b (1.98) BS04 94H 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386360 5npk:b (1.98) BS05 9JN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386361 5npk:b (1.98) BS06 94H 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386362 5npk:d (1.98) BS01 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386363 5npk:d (1.98) BS02 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386364 5npk:d (1.98) BS03 MN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386365 5npk:d (1.98) BS04 94H 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386366 5npl:A (2.79) BS01 DO3 ? N/A A8YJ50 29915055
    386367 5npm:A (2.7) BS01 rna ? GO:0000049 ... Q5SLP7 29512642
    386368 5npp:B (2.22) BS01 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386369 5npp:B (2.22) BS02 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386370 5npp:B (2.22) BS03 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386371 5npp:B (2.22) BS04 MN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386372 5npp:B (2.22) BS05 94K 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386373 5npp:B (2.22) BS06 6EJ 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386374 5npp:D (2.22) BS01 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386375 5npp:D (2.22) BS02 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386376 5npp:D (2.22) BS03 dna 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386377 5npp:D (2.22) BS04 MN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386378 5npp:D (2.22) BS05 94K 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386379 5npp:D (2.22) BS06 6EJ 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    28507124
    386380 5npq:A (2.372) BS01 94Q 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 N/A
    386381 5npq:A (2.372) BS02 MG 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 N/A
    386382 5npq:B (2.372) BS01 94Q 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 N/A
    386383 5npq:B (2.372) BS02 MG 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 N/A
    386384 5npr:A (1.85) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 29723473
    386385 5npr:A (1.85) BS02 94T 2.4.1.255 GO:0006493 ... O15294 29723473
    386386 5nps:A (1.68) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 29723473
    386387 5nps:A (1.68) BS02 94T 2.4.1.255 GO:0006493 ... O15294 29723473
    386388 5npu:A (3.5) BS01 MG N/A GO:0000287 ... N/A 29497023
    386389 5npu:A (3.5) BS02 TPP N/A GO:0000287 ... N/A 29497023
    386390 5npu:B (3.5) BS01 MG N/A GO:0000287 ... N/A 29497023
    386391 5npu:B (3.5) BS02 TPP N/A GO:0000287 ... N/A 29497023
    386392 5npu:C (3.5) BS01 MG N/A GO:0000287 ... N/A 29497023
    386393 5npu:C (3.5) BS02 TPP N/A GO:0000287 ... N/A 29497023
    386394 5npu:D (3.5) BS01 MG N/A GO:0000287 ... N/A 29497023
    386395 5npu:D (3.5) BS02 TPP N/A GO:0000287 ... N/A 29497023
    386396 5npz:A (1.43) BS01 peptide ? N/A B1PJV3 29772011
    386397 5nq0:A (1.1) BS01 peptide ? N/A B1PJV3 29772011
    386398 5nq1:A (2.14) BS01 peptide ? N/A B1PJV3 29772011
    386399 5nq1:D (2.14) BS01 peptide ? N/A B1PJV3 29772011
    386400 5nq2:A (1.54) BS01 peptide ? N/A B1A9P6 29772011

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).