SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    38601 1os9:C (1.85) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38602 1os9:C (1.85) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38603 1os9:C (1.85) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38604 1os9:D (1.85) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    38605 1os9:D (1.85) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    38606 1os9:D (1.85) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38607 1os9:D (1.85) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38608 1os9:D (1.85) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38609 1os9:E (1.85) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    38610 1os9:E (1.85) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    38611 1os9:E (1.85) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38612 1os9:E (1.85) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38613 1os9:E (1.85) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38614 1os9:F (1.85) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    38615 1os9:F (1.85) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    38616 1os9:F (1.85) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38617 1os9:F (1.85) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38618 1os9:F (1.85) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    38619 1osa:A (1.68) BS01 CA ? GO:0005509 ... P07463 15299476
    38620 1osa:A (1.68) BS02 CA ? GO:0005509 ... P07463 15299476
    38621 1osa:A (1.68) BS03 CA ? GO:0005509 ... P07463 15299476
    38622 1osa:A (1.68) BS04 CA ? GO:0005509 ... P07463 15299476
    38623 1osb:A (2.65) BS01 dna ? N/A Q47673 14625590
    38624 1osb:C (2.65) BS01 dna ? N/A Q47673 14625590
    38625 1ose:A (2.3) BS01 AC1 3.2.1.1 GO:0003824 ... P00690 8681972
    38626 1ose:A (2.3) BS02 GLC 3.2.1.1 GO:0003824 ... P00690 8681972
    38627 1ose:A (2.3) BS03 AC1 3.2.1.1 GO:0003824 ... P00690 8681972
    38628 1ose:A (2.3) BS04 BGC 3.2.1.1 GO:0003824 ... P00690 8681972
    38629 1ose:A (2.3) BS05 CA 3.2.1.1 GO:0003824 ... P00690 8681972
    38630 1osf:A (1.75) BS01 KOS 3.6.4.10 GO:0005524 ... P07900 12725864 BindingDB: IC50=919nM
    38631 1osg:A (3.0) BS01 peptide ? GO:0005164 ... Q9Y275 12755599
    38632 1osg:B (3.0) BS01 peptide ? GO:0005164 ... Q9Y275 12755599
    38633 1osg:C (3.0) BS01 peptide ? GO:0005164 ... Q9Y275 12755599
    38634 1osg:C (3.0) BS02 peptide ? GO:0005164 ... Q9Y275 12755599
    38635 1osg:D (3.0) BS01 peptide ? GO:0005164 ... Q9Y275 12755599
    38636 1osg:E (3.0) BS01 peptide ? GO:0005164 ... Q9Y275 12755599
    38637 1osg:F (3.0) BS01 peptide ? GO:0005164 ... Q9Y275 12755599
    38638 1osh:A (1.8) BS01 FEX ? GO:0003677 ... Q96RI1 12718892
    38639 1osl:A (-1.00) BS01 dna ? GO:0003677 ... P03023 15256668
    38640 1osl:A (-1.00) BS02 dna ? GO:0003677 ... P03023 15256668
    38641 1osl:B (-1.00) BS01 dna ? GO:0003677 ... P03023 15256668
    38642 1osl:B (-1.00) BS02 dna ? GO:0003677 ... P03023 15256668
    38643 1osn:A (3.2) BS01 ADP 2.7.1.21 GO:0004797 ... P0C0E6 12686543
    38644 1osn:A (3.2) BS02 BVP 2.7.1.21 GO:0004797 ... P0C0E6 12686543
    38645 1osn:B (3.2) BS01 ADP 2.7.1.21 GO:0004797 ... P0C0E6 12686543
    38646 1osn:B (3.2) BS02 BVP 2.7.1.21 GO:0004797 ... P0C0E6 12686543
    38647 1osn:C (3.2) BS01 ADP 2.7.1.21 GO:0004797 ... P0C0E6 12686543
    38648 1osn:C (3.2) BS02 BVP 2.7.1.21 GO:0004797 ... P0C0E6 12686543
    38649 1osn:D (3.2) BS01 ADP 2.7.1.21 GO:0004797 ... P0C0E6 12686543
    38650 1osn:D (3.2) BS02 BVP 2.7.1.21 GO:0004797 ... P0C0E6 12686543
    38651 1oss:A (1.93) BS01 CA 3.4.21.4 GO:0004252 ... P00775 12885239
    38652 1oss:A (1.93) BS02 BEN 3.4.21.4 GO:0004252 ... P00775 12885239 MOAD: Ki=16.4uM
    38653 1osv:A (2.5) BS01 peptide ? GO:0003677 ... Q62735 12718893
    38654 1osv:A (2.5) BS02 CHC ? GO:0003677 ... Q62735 12718893
    38655 1osv:B (2.5) BS01 peptide ? GO:0003677 ... Q62735 12718893
    38656 1osv:B (2.5) BS02 peptide ? GO:0003677 ... Q62735 12718893
    38657 1osv:B (2.5) BS03 CHC ? GO:0003677 ... Q62735 12718893
    38658 1osz:A (2.1) BS01 peptide ? N/A P01901 9707600
    38659 1ot1:A (2.0) BS01 BGC 2.4.1.19 GO:0003824 ... P43379 12706817
    38660 1ot1:A (2.0) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38661 1ot1:A (2.0) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38662 1ot1:A (2.0) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38663 1ot1:A (2.0) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38664 1ot1:A (2.0) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38665 1ot1:A (2.0) BS07 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38666 1ot1:A (2.0) BS08 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38667 1ot1:A (2.0) BS09 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38668 1ot1:A (2.0) BS10 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38669 1ot1:A (2.0) BS11 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38670 1ot1:A (2.0) BS12 CA 2.4.1.19 GO:0003824 ... P43379 12706817
    38671 1ot1:A (2.0) BS13 CA 2.4.1.19 GO:0003824 ... P43379 12706817
    38672 1ot1:A (2.0) BS14 CA 2.4.1.19 GO:0003824 ... P43379 12706817
    38673 1ot2:A (2.1) BS01 BGC 2.4.1.19 GO:0003824 ... P43379 12706817
    38674 1ot2:A (2.1) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38675 1ot2:A (2.1) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38676 1ot2:A (2.1) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38677 1ot2:A (2.1) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38678 1ot2:A (2.1) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38679 1ot2:A (2.1) BS07 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38680 1ot2:A (2.1) BS08 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38681 1ot2:A (2.1) BS09 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38682 1ot2:A (2.1) BS10 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38683 1ot2:A (2.1) BS11 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38684 1ot2:A (2.1) BS12 CA 2.4.1.19 GO:0003824 ... P43379 12706817
    38685 1ot2:A (2.1) BS13 GLC 2.4.1.19 GO:0003824 ... P43379 12706817
    38686 1ot2:A (2.1) BS14 CA 2.4.1.19 GO:0003824 ... P43379 12706817
    38687 1ot2:A (2.1) BS15 CA 2.4.1.19 GO:0003824 ... P43379 12706817
    38688 1ot3:A (2.5) BS01 THM 2.7.1.145 GO:0004136 ... Q9XZT6 12741827
    38689 1ot3:B (2.5) BS01 THM 2.7.1.145 GO:0004136 ... Q9XZT6 12741827
    38690 1ot3:C (2.5) BS01 THM 2.7.1.145 GO:0004136 ... Q9XZT6 12741827
    38691 1ot3:D (2.5) BS01 THM 2.7.1.145 GO:0004136 ... Q9XZT6 12741827
    38692 1ot3:E (2.5) BS01 THM 2.7.1.145 GO:0004136 ... Q9XZT6 12741827
    38693 1ot3:F (2.5) BS01 THM 2.7.1.145 GO:0004136 ... Q9XZT6 12741827
    38694 1ot3:G (2.5) BS01 THM 2.7.1.145 GO:0004136 ... Q9XZT6 12741827
    38695 1ot3:H (2.5) BS01 THM 2.7.1.145 GO:0004136 ... Q9XZT6 12741827
    38696 1ot5:A (2.4) BS01 peptide 3.4.21.61 GO:0004252 ... P13134 12779325
    38697 1ot5:A (2.4) BS02 CA 3.4.21.61 GO:0004252 ... P13134 12779325
    38698 1ot5:A (2.4) BS03 CA 3.4.21.61 GO:0004252 ... P13134 12779325
    38699 1ot5:A (2.4) BS04 CA 3.4.21.61 GO:0004252 ... P13134 12779325
    38700 1ot5:B (2.4) BS01 peptide 3.4.21.61 GO:0004252 ... P13134 12779325
    38701 1ot5:B (2.4) BS02 CA 3.4.21.61 GO:0004252 ... P13134 12779325
    38702 1ot5:B (2.4) BS03 CA 3.4.21.61 GO:0004252 ... P13134 12779325
    38703 1ot5:B (2.4) BS04 CA 3.4.21.61 GO:0004252 ... P13134 12779325
    38704 1ot7:A (2.9) BS01 peptide ? GO:0003677 ... Q62735 12718893
    38705 1ot7:A (2.9) BS02 CHC ? GO:0003677 ... Q62735 12718893
    38706 1ot7:B (2.9) BS01 peptide ? GO:0003677 ... Q62735 12718893
    38707 1ot7:B (2.9) BS02 peptide ? GO:0003677 ... Q62735 12718893
    38708 1ot7:B (2.9) BS03 IU5 ? GO:0003677 ... Q62735 12718893
    38709 1otc:A (2.8) BS01 dna ? GO:0000723 ... P29549 9875850
    38710 1otc:B (2.8) BS01 dna ? GO:0000781 ... P16458 9875850
    38711 1oth:A (1.85) BS01 PAO 2.1.3.3 GO:0000050 ... P00480 9852088 BindingDB: Ki=100nM
    38712 1otn:A (1.97) BS01 CA ? N/A P0DQD2 15020228
    38713 1oto:A (1.96) BS01 CA ? N/A P0DQD2 15020228
    38714 1ots:A (2.51) BS01 CL ? GO:0005247 ... P37019 12649487
    38715 1ots:A (2.51) BS02 CL ? GO:0005247 ... P37019 12649487
    38716 1ots:B (2.51) BS01 CL ? GO:0005247 ... P37019 12649487
    38717 1ots:B (2.51) BS02 CL ? GO:0005247 ... P37019 12649487
    38718 1ott:A (3.0) BS01 CL ? GO:0005247 ... P37019 12649487
    38719 1ott:A (3.0) BS02 CL ? GO:0005247 ... P37019 12649487
    38720 1ott:A (3.0) BS03 CL ? GO:0005247 ... P37019 12649487
    38721 1ott:B (3.0) BS01 CL ? GO:0005247 ... P37019 12649487
    38722 1ott:B (3.0) BS02 CL ? GO:0005247 ... P37019 12649487
    38723 1ott:B (3.0) BS03 CL ? GO:0005247 ... P37019 12649487
    38724 1otu:A (3.3) BS01 CL ? GO:0005247 ... P37019 12649487
    38725 1otu:A (3.3) BS02 CL ? GO:0005247 ... P37019 12649487
    38726 1otu:A (3.3) BS03 CL ? GO:0005247 ... P37019 12649487
    38727 1otu:B (3.3) BS01 CL ? GO:0005247 ... P37019 12649487
    38728 1otu:B (3.3) BS02 CL ? GO:0005247 ... P37019 12649487
    38729 1otw:A (2.3) BS01 PQQ 1.3.3.11 GO:0006790 ... P27505 15148379
    38730 1otw:B (2.3) BS01 PQQ 1.3.3.11 GO:0006790 ... P27505 15148379
    38731 1oty:A (2.5) BS01 6MP 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38732 1oty:B (2.5) BS01 6MP 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38733 1oty:C (2.5) BS01 6MP 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38734 1ou4:A (2.5) BS01 6MP 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38735 1ou4:B (2.5) BS01 6MP 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38736 1ou4:C (2.5) BS01 6MP 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38737 1ou6:A (2.07) BS01 168 2.3.1.9 GO:0003985 ... P07097 N/A
    38738 1ou6:B (2.07) BS01 168 2.3.1.9 GO:0003985 ... P07097 N/A
    38739 1ou8:A (1.6) BS01 peptide ? N/A P45206 14536076
    38740 1ou8:A (1.6) BS02 MG ? N/A P45206 14536076
    38741 1ou8:B (1.6) BS01 peptide ? N/A P45206 14536076
    38742 1ou8:B (1.6) BS02 MG ? N/A P45206 14536076
    38743 1ou9:A (1.8) BS01 CA ? N/A P45206 14536076
    38744 1ou9:A (1.8) BS02 CA ? N/A P45206 14536076
    38745 1ou9:B (1.8) BS01 CA ? N/A P45206 14536076
    38746 1ouk:A (2.5) BS01 084 2.7.11.24 GO:0000077 ... Q16539 12897767 MOAD: ic50=0.13nM
    BindingDB: IC50=110nM
    38747 1oum:A (2.4) BS01 TAL 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38748 1oum:B (2.4) BS01 TAL 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38749 1oum:C (2.4) BS01 TAL 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38750 1ouo:A (2.3) BS01 MG 3.1.-.- GO:0004518 ... Q7MHK3 12881435
    38751 1oup:A (2.3) BS01 dna 3.1.-.- GO:0004518 ... Q7MHK3 12881435
    38752 1oup:A (2.3) BS02 dna 3.1.-.- GO:0004518 ... Q7MHK3 12881435
    38753 1oup:A (2.3) BS03 dna 3.1.-.- GO:0004518 ... Q7MHK3 12881435
    38754 1oup:A (2.3) BS04 CA 3.1.-.- GO:0004518 ... Q7MHK3 12881435
    38755 1oup:B (2.3) BS01 dna 3.1.-.- GO:0004518 ... Q7MHK3 12881435
    38756 1oup:B (2.3) BS02 dna 3.1.-.- GO:0004518 ... Q7MHK3 12881435
    38757 1oup:B (2.3) BS03 CA 3.1.-.- GO:0004518 ... Q7MHK3 12881435
    38758 1ouq:A (3.2) BS01 dna ? GO:0003677 ... P06956 12954782
    38759 1ouq:A (3.2) BS02 dna ? GO:0003677 ... P06956 12954782
    38760 1ouq:B (3.2) BS01 dna ? GO:0003677 ... P06956 12954782
    38761 1ouq:B (3.2) BS02 dna ? GO:0003677 ... P06956 12954782
    38762 1ouq:B (3.2) BS03 dna ? GO:0003677 ... P06956 12954782
    38763 1ouq:E (3.2) BS01 dna ? GO:0003677 ... P06956 12954782
    38764 1ouq:E (3.2) BS02 dna ? GO:0003677 ... P06956 12954782
    38765 1ouq:F (3.2) BS01 dna ? GO:0003677 ... P06956 12954782
    38766 1ouq:F (3.2) BS02 dna ? GO:0003677 ... P06956 12954782
    38767 1ouq:F (3.2) BS03 dna ? GO:0003677 ... P06956 12954782
    38768 1our:A (1.42) BS01 MAN ? GO:0030246 ... Q9HYN5 12909014
    38769 1our:A (1.42) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38770 1our:A (1.42) BS03 CA ? GO:0030246 ... Q9HYN5 12909014
    38771 1out:A (2.3) BS01 HEM ? GO:0004601 ... P02019 8683580
    38772 1out:B (2.3) BS01 HEM ? GO:0004601 ... P02142 8683580
    38773 1ouu:A (2.5) BS01 HEM ? GO:0004601 ... P02019 8683580
    38774 1ouu:B (2.5) BS01 HEM ? GO:0004601 ... P02142 8683580
    38775 1ouu:C (2.5) BS01 HEM ? GO:0004601 ... P02019 8683580
    38776 1ouu:D (2.5) BS01 HEM ? GO:0004601 ... P02142 8683580
    38777 1oux:A (2.0) BS01 CA ? GO:0030246 ... Q9HYN5 12909014
    38778 1oux:A (2.0) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38779 1oux:B (2.0) BS01 CA ? GO:0030246 ... Q9HYN5 12909014
    38780 1oux:B (2.0) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38781 1oux:C (2.0) BS01 CA ? GO:0030246 ... Q9HYN5 12909014
    38782 1oux:C (2.0) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38783 1oux:D (2.0) BS01 CA ? GO:0030246 ... Q9HYN5 12909014
    38784 1oux:D (2.0) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38785 1ouy:A (2.5) BS01 094 2.7.11.24 GO:0000077 ... Q16539 12897767 MOAD: ic50=4.3nM
    38786 1ouz:A (2.41) BS01 dna ? GO:0000976 ... P0A6X7 12842466
    38787 1ouz:A (2.41) BS02 dna ? GO:0000976 ... P0A6X7 12842466
    38788 1ouz:A (2.41) BS03 dna ? GO:0000976 ... P0A6X7 12842466
    38789 1ouz:B (2.41) BS01 dna ? GO:0003677 ... P0A6Y1 12842466
    38790 1ouz:B (2.41) BS02 dna ? GO:0003677 ... P0A6Y1 12842466
    38791 1ov3:A (1.8) BS01 peptide ? N/A P14598 12732142
    38792 1ov3:A (1.8) BS02 peptide ? N/A P14598 12732142
    38793 1ov3:B (1.8) BS01 peptide ? N/A P14598 12732142
    38794 1ov3:B (1.8) BS02 peptide ? N/A P14598 12732142
    38795 1ov4:A (2.7) BS01 SO4 2.8.2.14
    2.8.2.2
    GO:0004027 ... Q06520 14573603
    38796 1ov4:A (2.7) BS02 AOX 2.8.2.14
    2.8.2.2
    GO:0004027 ... Q06520 14573603
    38797 1ov5:A (2.1) BS01 2LP 3.2.1.17 GO:0003796 ... P00720 15046985
    38798 1ov6:A (2.4) BS01 DBM 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38799 1ov6:B (2.4) BS01 DBM 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38800 1ov6:C (2.4) BS01 DBM 2.4.2.1 GO:0003824 ... P0ABP8 14700625

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).