SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    387801 5o3k:K (2.1) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387802 5o3k:K (2.1) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387803 5o3k:L (2.1) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387804 5o3k:L (2.1) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387805 5o3k:L (2.1) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387806 5o3m:A (2.23) BS01 9JE ? GO:0005737 ... A6T7M3 28857436
    387807 5o3m:B (2.23) BS01 9JE ? GO:0005737 ... A6T7M3 28857436
    387808 5o3m:C (2.23) BS01 9JE ? GO:0005737 ... A6T7M3 28857436
    387809 5o3m:C (2.23) BS02 9JE ? GO:0005737 ... A6T7M3 28857436
    387810 5o3m:D (2.23) BS01 9JE ? GO:0005737 ... A6T7M3 28857436
    387811 5o3m:D (2.23) BS02 9JE ? GO:0005737 ... A6T7M3 28857436
    387812 5o3m:E (2.23) BS01 9JE ? GO:0005737 ... A6T7M3 28857436
    387813 5o3m:F (2.23) BS01 9JE ? GO:0005737 ... A6T7M3 28857436
    387814 5o3n:A (2.05) BS01 MN ? GO:0005737 ... B2DCZ6 28857436
    387815 5o3n:A (2.05) BS02 4LU ? GO:0005737 ... B2DCZ6 28857436
    387816 5o3n:B (2.05) BS01 MN ? GO:0005737 ... B2DCZ6 28857436
    387817 5o3n:B (2.05) BS02 4LU ? GO:0005737 ... B2DCZ6 28857436
    387818 5o3q:A (1.75) BS01 CMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=2.1uM
    387819 5o3q:A (1.75) BS02 CMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=2.1uM
    387820 5o3q:B (1.75) BS01 CMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=2.1uM
    387821 5o3q:B (1.75) BS02 CMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=2.1uM
    387822 5o3q:C (1.75) BS01 CMP ? GO:0005886 ... P73954 29735650
    387823 5o3q:C (1.75) BS02 CMP ? GO:0005886 ... P73954 29735650
    387824 5o3r:A (1.9) BS01 AMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=10.1uM
    387825 5o3r:A (1.9) BS02 AMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=10.1uM
    387826 5o3r:B (1.9) BS01 AMP ? GO:0005886 ... P73954 29735650
    387827 5o3r:B (1.9) BS02 AMP ? GO:0005886 ... P73954 29735650
    387828 5o3r:C (1.9) BS01 AMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=10.1uM
    387829 5o3r:C (1.9) BS02 AMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=10.1uM
    387830 5o3u:A (1.86) BS01 peptide 3.4.21.-
    3.4.21.26
    GO:0004252 ... R4P353 29377663
    387831 5o3u:B (1.86) BS01 peptide 3.4.21.-
    3.4.21.26
    GO:0004252 ... R4P353 29377663
    387832 5o3u:C (1.86) BS01 peptide 3.4.21.-
    3.4.21.26
    GO:0004252 ... R4P353 29377663
    387833 5o3u:D (1.86) BS01 peptide 3.4.21.-
    3.4.21.26
    GO:0004252 ... R4P353 29377663
    387834 5o3v:A (2.17) BS01 peptide 3.4.21.-
    3.4.21.26
    GO:0004252 ... R4P353 29377663
    387835 5o3v:B (2.17) BS01 peptide 3.4.21.-
    3.4.21.26
    GO:0004252 ... R4P353 29377663
    387836 5o3w:A (2.0) BS01 peptide 3.4.21.-
    3.4.21.26
    GO:0004252 ... R4P353 29377663
    387837 5o3w:B (2.0) BS01 peptide 3.4.21.-
    3.4.21.26
    GO:0004252 ... R4P353 29377663
    387838 5o3w:C (2.0) BS01 peptide 3.4.21.-
    3.4.21.26
    GO:0004252 ... R4P353 29377663
    387839 5o3w:D (2.0) BS01 peptide 3.4.21.-
    3.4.21.26
    GO:0004252 ... R4P353 29377663
    387840 5o3y:A (1.3) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 29703933
    387841 5o3y:A (1.3) BS02 9JK 1.15.1.1 GO:0000302 ... P00441 29703933
    387842 5o3y:A (1.3) BS03 ZN 1.15.1.1 GO:0000302 ... P00441 29703933
    387843 5o3y:F (1.3) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 29703933
    387844 5o3y:F (1.3) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 29703933
    387845 5o3y:F (1.3) BS03 9JK 1.15.1.1 GO:0000302 ... P00441 29703933
    387846 5o40:A (1.5) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 29703933
    387847 5o40:A (1.5) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 29703933
    387848 5o40:A (1.5) BS03 9JT 1.15.1.1 GO:0000302 ... P00441 29703933
    387849 5o40:F (1.5) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 29703933
    387850 5o40:F (1.5) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 29703933
    387851 5o40:F (1.5) BS03 9JT 1.15.1.1 GO:0000302 ... P00441 29703933
    387852 5o41:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 28375148
    387853 5o42:A (1.76) BS01 NAD 1.1.1.62 GO:0004303 ... Q9BPX1 29859505
    387854 5o42:A (1.76) BS02 BGC 1.1.1.62 GO:0004303 ... Q9BPX1 29859505
    387855 5o42:A (1.76) BS03 9JW 1.1.1.62 GO:0004303 ... Q9BPX1 29859505 MOAD: Ki=1.5nM
    BindingDB: Ki=1.5nM
    387856 5o43:A (1.5) BS01 NAD 1.1.1.62 GO:0004303 ... Q9BPX1 29859505
    387857 5o43:A (1.5) BS02 BGC 1.1.1.62 GO:0004303 ... Q9BPX1 29859505
    387858 5o43:A (1.5) BS03 9JQ 1.1.1.62 GO:0004303 ... Q9BPX1 29859505 MOAD: Ki=42nM
    BindingDB: Ki=42nM
    387859 5o44:E (3.14) BS01 MG ? GO:0046872 ... Q45TR8 29111344
    387860 5o45:A (0.99) BS01 peptide ? N/A Q9NZQ7 28881104
    387861 5o47:A (1.91) BS01 9OK ? GO:0004553 ... J7HDY4 N/A
    387862 5o47:A (1.91) BS02 9WZ ? GO:0004553 ... J7HDY4 N/A
    387863 5o47:A (1.91) BS03 975 ? GO:0004553 ... J7HDY4 N/A
    387864 5o47:B (1.91) BS01 MAN ? GO:0004553 ... J7HDY4 N/A
    387865 5o47:B (1.91) BS02 9OK ? GO:0004553 ... J7HDY4 N/A
    387866 5o47:B (1.91) BS03 9WZ ? GO:0004553 ... J7HDY4 N/A
    387867 5o48:A (1.69) BS01 NHW 2.3.1.97 GO:0004379 ... A5K1A2 29760414
    387868 5o48:A (1.69) BS02 9K2 2.3.1.97 GO:0004379 ... A5K1A2 29760414
    387869 5o48:A (1.69) BS03 MG 2.3.1.97 GO:0004379 ... A5K1A2 29760414
    387870 5o48:B (1.69) BS01 NHW 2.3.1.97 GO:0004379 ... A5K1A2 29760414
    387871 5o48:B (1.69) BS02 9K2 2.3.1.97 GO:0004379 ... A5K1A2 29760414
    387872 5o48:B (1.69) BS03 MG 2.3.1.97 GO:0004379 ... A5K1A2 29760414
    387873 5o48:C (1.69) BS01 NHW 2.3.1.97 GO:0004379 ... A5K1A2 29760414
    387874 5o48:C (1.69) BS02 9K2 2.3.1.97 GO:0004379 ... A5K1A2 29760414
    387875 5o48:C (1.69) BS03 MG 2.3.1.97 GO:0004379 ... A5K1A2 29760414
    387876 5o49:A (1.91) BS01 9K5 2.7.10.1 GO:0004672 ... P11362 29119993
    387877 5o49:B (1.91) BS01 9K5 2.7.10.1 GO:0004672 ... P11362 29119993
    387878 5o4a:A (2.01) BS01 9K8 2.7.10.1 GO:0004672 ... P11362 29119993
    387879 5o4a:B (2.01) BS01 9K8 2.7.10.1 GO:0004672 ... P11362 29119993
    387880 5o4c:C (2.8) BS01 HEC ? GO:0005506 ... P07173 28781082
    387881 5o4c:C (2.8) BS02 HEC ? GO:0005506 ... P07173 28781082
    387882 5o4c:C (2.8) BS03 HEC ? GO:0005506 ... P07173 28781082
    387883 5o4c:C (2.8) BS04 HEC ? GO:0005506 ... P07173 28781082
    387884 5o4c:L (2.8) BS01 BCB ? GO:0009772 ... P06009 28781082
    387885 5o4c:L (2.8) BS02 BCB ? GO:0009772 ... P06009 28781082
    387886 5o4c:L (2.8) BS03 BPB ? GO:0009772 ... P06009 28781082
    387887 5o4c:L (2.8) BS04 FE2 ? GO:0009772 ... P06009 28781082
    387888 5o4c:L (2.8) BS05 MQ7 ? GO:0009772 ... P06009 28781082
    387889 5o4c:L (2.8) BS06 BCB ? GO:0009772 ... P06009 28781082
    387890 5o4c:L (2.8) BS07 BPB ? GO:0009772 ... P06009 28781082
    387891 5o4c:M (2.8) BS01 BCB ? GO:0009772 ... P06010 28781082
    387892 5o4c:M (2.8) BS02 BPB ? GO:0009772 ... P06010 28781082
    387893 5o4c:M (2.8) BS03 FE2 ? GO:0009772 ... P06010 28781082
    387894 5o4c:M (2.8) BS04 MQ7 ? GO:0009772 ... P06010 28781082
    387895 5o4c:M (2.8) BS05 BCB ? GO:0009772 ... P06010 28781082
    387896 5o4c:M (2.8) BS06 BCB ? GO:0009772 ... P06010 28781082
    387897 5o4c:M (2.8) BS07 BPB ? GO:0009772 ... P06010 28781082
    387898 5o4c:M (2.8) BS08 NS5 ? GO:0009772 ... P06010 28781082
    387899 5o4e:A (2.15) BS01 BMA ? N/A P0DOX5 28816592
    387900 5o4e:B (2.15) BS01 BMA ? N/A P0DOX5 28816592
    387901 5o4e:D (2.15) BS01 BMA ? N/A P0DOX5 28816592
    387902 5o4f:A (2.1) BS01 ZN ? GO:0015276 ... P42264 28691798
    387903 5o4f:A (2.1) BS02 8VE ? GO:0015276 ... P42264 28691798 MOAD: Ki=208uM
    387904 5o4f:A (2.1) BS03 ZN ? GO:0015276 ... P42264 28691798
    387905 5o4f:B (2.1) BS01 8VE ? GO:0015276 ... P42264 28691798 MOAD: Ki=208uM
    387906 5o4f:B (2.1) BS02 ZN ? GO:0015276 ... P42264 28691798
    387907 5o4f:B (2.1) BS03 ZN ? GO:0015276 ... P42264 28691798
    387908 5o4h:A (1.75) BS01 SAH ? N/A Q6LX54 28682478
    387909 5o4h:B (1.75) BS01 SAH ? N/A Q6LX54 28682478
    387910 5o4h:C (1.75) BS01 SAH ? N/A Q6LX54 28682478
    387911 5o4h:D (1.75) BS01 SAH ? N/A Q6LX54 28682478
    387912 5o4i:A (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387913 5o4i:A (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387914 5o4i:A (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387915 5o4i:B (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387916 5o4i:B (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387917 5o4i:B (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387918 5o4i:C (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387919 5o4i:C (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387920 5o4i:C (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387921 5o4i:D (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387922 5o4i:D (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387923 5o4i:D (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387924 5o4i:E (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387925 5o4i:E (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387926 5o4i:E (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387927 5o4i:F (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387928 5o4i:F (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387929 5o4i:F (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387930 5o4i:G (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387931 5o4i:G (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387932 5o4i:G (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387933 5o4i:H (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387934 5o4i:H (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387935 5o4i:H (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387936 5o4i:I (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387937 5o4i:I (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387938 5o4i:I (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387939 5o4i:J (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387940 5o4i:J (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387941 5o4i:J (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387942 5o4i:J (1.8) BS04 SO4 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387943 5o4i:K (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387944 5o4i:K (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387945 5o4i:K (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387946 5o4i:L (1.8) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387947 5o4i:L (1.8) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387948 5o4i:L (1.8) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387949 5o4j:A (1.7) BS01 SAH ? N/A Q6LX54 28682478
    387950 5o4j:A (1.7) BS02 PJL ? N/A Q6LX54 28682478
    387951 5o4j:A (1.7) BS03 9KH ? N/A Q6LX54 28682478
    387952 5o4j:B (1.7) BS01 PJL ? N/A Q6LX54 28682478
    387953 5o4j:B (1.7) BS02 SAH ? N/A Q6LX54 28682478
    387954 5o4j:B (1.7) BS03 9KH ? N/A Q6LX54 28682478
    387955 5o4j:C (1.7) BS01 SAH ? N/A Q6LX54 28682478
    387956 5o4j:C (1.7) BS02 9KH ? N/A Q6LX54 28682478
    387957 5o4j:D (1.7) BS01 9KH ? N/A Q6LX54 28682478
    387958 5o4j:D (1.7) BS02 SAH ? N/A Q6LX54 28682478
    387959 5o4k:A (1.5) BS01 HEM 1.14.19.70 GO:0004497 ... P9WPP7 29185746
    387960 5o4k:A (1.5) BS02 9KE 1.14.19.70 GO:0004497 ... P9WPP7 29185746
    387961 5o4l:A (1.64) BS01 HEM 1.14.19.70 GO:0004497 ... P9WPP7 29185746
    387962 5o4l:A (1.64) BS02 9KB 1.14.19.70 GO:0004497 ... P9WPP7 29185746
    387963 5o4m:A (2.1) BS01 SAH ? N/A Q6LX54 28682478
    387964 5o4m:A (2.1) BS02 9KH ? N/A Q6LX54 28682478
    387965 5o4m:A (2.1) BS03 9KH ? N/A Q6LX54 28682478
    387966 5o4m:B (2.1) BS01 9KH ? N/A Q6LX54 28682478
    387967 5o4m:B (2.1) BS02 SAH ? N/A Q6LX54 28682478
    387968 5o4m:B (2.1) BS03 9KH ? N/A Q6LX54 28682478
    387969 5o4m:C (2.1) BS01 SAH ? N/A Q6LX54 28682478
    387970 5o4m:C (2.1) BS02 9KH ? N/A Q6LX54 28682478
    387971 5o4m:C (2.1) BS03 9KH ? N/A Q6LX54 28682478
    387972 5o4m:D (2.1) BS01 9KH ? N/A Q6LX54 28682478
    387973 5o4m:D (2.1) BS02 SAH ? N/A Q6LX54 28682478
    387974 5o4m:D (2.1) BS03 9KH ? N/A Q6LX54 28682478
    387975 5o4n:A (2.05) BS01 SAH ? N/A Q6LX54 28682478
    387976 5o4n:A (2.05) BS02 9KH ? N/A Q6LX54 28682478
    387977 5o4n:A (2.05) BS03 9KH ? N/A Q6LX54 28682478
    387978 5o4n:B (2.05) BS01 9KH ? N/A Q6LX54 28682478
    387979 5o4n:B (2.05) BS02 SAH ? N/A Q6LX54 28682478
    387980 5o4n:B (2.05) BS03 9KH ? N/A Q6LX54 28682478
    387981 5o4n:C (2.05) BS01 SAH ? N/A Q6LX54 28682478
    387982 5o4n:C (2.05) BS02 9KH ? N/A Q6LX54 28682478
    387983 5o4n:C (2.05) BS03 9KH ? N/A Q6LX54 28682478
    387984 5o4n:D (2.05) BS01 9KH ? N/A Q6LX54 28682478
    387985 5o4n:D (2.05) BS02 SAH ? N/A Q6LX54 28682478
    387986 5o4n:D (2.05) BS03 9KH ? N/A Q6LX54 28682478
    387987 5o4q:A (1.9) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387988 5o4q:A (1.9) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387989 5o4q:B (1.9) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387990 5o4q:B (1.9) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387991 5o4q:B (1.9) BS03 AZI 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387992 5o4q:C (1.9) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387993 5o4q:C (1.9) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387994 5o4q:D (1.9) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387995 5o4q:D (1.9) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387996 5o4q:E (1.9) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387997 5o4q:E (1.9) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387998 5o4q:F (1.9) BS01 AZI 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    387999 5o4q:F (1.9) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633
    388000 5o4q:F (1.9) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 29512633

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).