SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    38801 1ov7:A (2.0) BS01 LYL 3.2.1.17 GO:0003796 ... P00720 15046985
    38802 1ov8:A (1.9) BS01 CU ? GO:0005507 ... P27197 12925783
    38803 1ov8:B (1.9) BS01 CU ? GO:0005507 ... P27197 12925783
    38804 1ov8:C (1.9) BS01 CU ? GO:0005507 ... P27197 12925783
    38805 1ov8:D (1.9) BS01 CU ? GO:0005507 ... P27197 12925783
    38806 1ova:A (1.95) BS01 CA ? GO:0004867 ... P01012 1942038
    38807 1ovb:A (2.3) BS01 FE ? GO:0005576 ... P56410 15299534
    38808 1ovb:A (2.3) BS02 CO3 ? GO:0005576 ... P56410 15299534
    38809 1ovd:A (2.25) BS01 MG 1.3.98.1 GO:0004152 ... A2RJT9 12732650
    38810 1ovd:A (2.25) BS02 FMN 1.3.98.1 GO:0004152 ... A2RJT9 12732650
    38811 1ovd:B (2.25) BS01 MG 1.3.98.1 GO:0004152 ... A2RJT9 12732650
    38812 1ovd:B (2.25) BS02 FMN 1.3.98.1 GO:0004152 ... A2RJT9 12732650
    38813 1ove:A (2.1) BS01 358 2.7.11.24 GO:0000077 ... Q16539 12897767 MOAD: ic50=0.74nM
    BindingDB: IC50=0.740000nM
    38814 1ovg:A (2.2) BS01 MDR 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38815 1ovg:B (2.2) BS01 MDR 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38816 1ovg:C (2.2) BS01 MDR 2.4.2.1 GO:0003824 ... P0ABP8 14700625
    38817 1ovh:A (1.95) BS01 2CM 3.2.1.17 GO:0003796 ... P00720 15046985
    38818 1ovj:A (2.0) BS01 FLM 3.2.1.17 GO:0003796 ... P00720 15046985
    38819 1ovk:A (2.1) BS01 NYL 3.2.1.17 GO:0003796 ... P00720 15046985
    38820 1ovm:A (2.65) BS01 MG 4.1.1.74 GO:0000287 ... P23234 12752451
    38821 1ovm:A (2.65) BS02 TPP 4.1.1.74 GO:0000287 ... P23234 12752451
    38822 1ovm:A (2.65) BS03 TPP 4.1.1.74 GO:0000287 ... P23234 12752451
    38823 1ovm:B (2.65) BS01 TPP 4.1.1.74 GO:0000287 ... P23234 12752451
    38824 1ovm:B (2.65) BS02 MG 4.1.1.74 GO:0000287 ... P23234 12752451
    38825 1ovm:B (2.65) BS03 TPP 4.1.1.74 GO:0000287 ... P23234 12752451
    38826 1ovm:C (2.65) BS01 MG 4.1.1.74 GO:0000287 ... P23234 12752451
    38827 1ovm:C (2.65) BS02 TPP 4.1.1.74 GO:0000287 ... P23234 12752451
    38828 1ovm:C (2.65) BS03 TPP 4.1.1.74 GO:0000287 ... P23234 12752451
    38829 1ovm:D (2.65) BS01 TPP 4.1.1.74 GO:0000287 ... P23234 12752451
    38830 1ovm:D (2.65) BS02 MG 4.1.1.74 GO:0000287 ... P23234 12752451
    38831 1ovm:D (2.65) BS03 TPP 4.1.1.74 GO:0000287 ... P23234 12752451
    38832 1ovp:A (1.4) BS01 BDF ? GO:0030246 ... Q9HYN5 12909014
    38833 1ovp:A (1.4) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38834 1ovp:A (1.4) BS03 CA ? GO:0030246 ... Q9HYN5 12909014
    38835 1ovr:A (2.99) BS01 MN N/A N/A N/A 16332076
    38836 1ovr:B (2.99) BS01 MN N/A N/A N/A 16332076
    38837 1ovr:C (2.99) BS01 MN N/A N/A N/A 16332076
    38838 1ovr:D (2.99) BS01 MN N/A N/A N/A 16332076
    38839 1ovr:D (2.99) BS02 MN N/A N/A N/A 16332076
    38840 1ovs:A (1.75) BS01 MAN ? GO:0030246 ... Q9HYN5 12909014
    38841 1ovs:A (1.75) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38842 1ovs:A (1.75) BS03 CA ? GO:0030246 ... Q9HYN5 12909014
    38843 1ovs:B (1.75) BS01 MAN ? GO:0030246 ... Q9HYN5 12909014
    38844 1ovs:B (1.75) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38845 1ovs:B (1.75) BS03 CA ? GO:0030246 ... Q9HYN5 12909014
    38846 1ovs:C (1.75) BS01 MAN ? GO:0030246 ... Q9HYN5 12909014
    38847 1ovs:C (1.75) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38848 1ovs:C (1.75) BS03 CA ? GO:0030246 ... Q9HYN5 12909014
    38849 1ovs:D (1.75) BS01 CA ? GO:0030246 ... Q9HYN5 12909014
    38850 1ovs:D (1.75) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38851 1ovt:A (2.4) BS01 FE ? GO:0005506 ... P02789 7490743
    38852 1ovt:A (2.4) BS02 FE ? GO:0005506 ... P02789 7490743
    38853 1ovt:A (2.4) BS03 CO3 ? GO:0005506 ... P02789 7490743
    38854 1ovt:A (2.4) BS04 CO3 ? GO:0005506 ... P02789 7490743
    38855 1ovu:A (3.1) BS01 CO N/A N/A N/A 16332076
    38856 1ovu:B (3.1) BS01 CO N/A N/A N/A 16332076
    38857 1ovu:C (3.1) BS01 CO N/A N/A N/A 16332076
    38858 1ovu:D (3.1) BS01 CO N/A N/A N/A 16332076
    38859 1ovu:D (3.1) BS02 CO N/A N/A N/A 16332076
    38860 1ovv:A (2.9) BS01 CO N/A N/A N/A 16332076
    38861 1ovv:B (2.9) BS01 CO N/A N/A N/A 16332076
    38862 1ovv:C (2.9) BS01 CO N/A N/A N/A 16332076
    38863 1ovv:D (2.9) BS01 CO N/A N/A N/A 16332076
    38864 1ovv:E (2.9) BS01 CO N/A N/A N/A 16332076
    38865 1ovv:F (2.9) BS01 CO N/A N/A N/A 16332076
    38866 1ovv:F (2.9) BS02 CO N/A N/A N/A 16332076
    38867 1ovw:A (2.7) BS01 SSG 3.2.1.4 GO:0004553 ... P46237 8952478
    38868 1ovw:A (2.7) BS02 SGC 3.2.1.4 GO:0004553 ... P46237 8952478
    38869 1ovw:A (2.7) BS03 SGC 3.2.1.4 GO:0004553 ... P46237 8952478
    38870 1ovw:B (2.7) BS01 SSG 3.2.1.4 GO:0004553 ... P46237 8952478
    38871 1ovw:B (2.7) BS02 SGC 3.2.1.4 GO:0004553 ... P46237 8952478
    38872 1ovw:B (2.7) BS03 SGC 3.2.1.4 GO:0004553 ... P46237 8952478
    38873 1ovw:C (2.7) BS01 SSG 3.2.1.4 GO:0004553 ... P46237 8952478
    38874 1ovw:C (2.7) BS02 SGC 3.2.1.4 GO:0004553 ... P46237 8952478
    38875 1ovw:C (2.7) BS03 SGC 3.2.1.4 GO:0004553 ... P46237 8952478
    38876 1ovw:D (2.7) BS01 SSG 3.2.1.4 GO:0004553 ... P46237 8952478
    38877 1ovw:D (2.7) BS02 SGC 3.2.1.4 GO:0004553 ... P46237 8952478
    38878 1ovw:D (2.7) BS03 SGC 3.2.1.4 GO:0004553 ... P46237 8952478
    38879 1ovx:A (-1.00) BS01 ZN ? GO:0008270 ... P0A6H1 14525985
    38880 1ovx:B (-1.00) BS01 ZN ? GO:0008270 ... P0A6H1 14525985
    38881 1ow0:A (3.1) BS01 BMA ? N/A P01876 12768205
    38882 1ow0:A (3.1) BS02 GAL ? N/A P01876 12768205
    38883 1ow0:B (3.1) BS01 BMA ? N/A P01876 12768205
    38884 1ow0:B (3.1) BS02 GAL ? N/A P01876 12768205
    38885 1ow2:A (2.0) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 14696183
    38886 1ow2:A (2.0) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 14696183
    38887 1ow2:A (2.0) BS03 EIP 5.3.3.2 GO:0000287 ... Q46822 14696183
    38888 1ow2:B (2.0) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 14696183
    38889 1ow2:B (2.0) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 14696183
    38890 1ow2:B (2.0) BS03 EIP 5.3.3.2 GO:0000287 ... Q46822 14696183
    38891 1ow3:B (1.8) BS01 MG 3.6.5.2 GO:0000902 ... P61586 11927263
    38892 1ow3:B (1.8) BS02 GDP 3.6.5.2 GO:0000902 ... P61586 11927263
    38893 1ow3:B (1.8) BS03 MGF 3.6.5.2 GO:0000902 ... P61586 11927263
    38894 1ow4:A (1.6) BS01 2AN ? GO:0005549 ... Q8MTC1 12766173 MOAD: Kd=2.1uM
    38895 1ow4:B (1.6) BS01 2AN ? GO:0005549 ... Q8MTC1 12766173 MOAD: Kd=2.1uM
    38896 1ow6:A (2.35) BS01 peptide 2.7.10.2 GO:0004713 ... Q05397 14527389
    38897 1ow6:C (2.35) BS01 peptide 2.7.10.2 GO:0004713 ... Q05397 14527389
    38898 1ow7:A (2.6) BS01 peptide 2.7.10.2 GO:0004713 ... Q05397 14527389
    38899 1ow7:B (2.6) BS01 peptide 2.7.10.2 GO:0004713 ... Q05397 14527389
    38900 1ow7:C (2.6) BS01 peptide 2.7.10.2 GO:0004713 ... Q05397 14527389
    38901 1ow8:A (2.85) BS01 peptide 2.7.10.2 GO:0004713 ... Q05397 14527389
    38902 1ow8:C (2.85) BS01 peptide 2.7.10.2 GO:0004713 ... Q05397 14527389
    38903 1owb:A (2.2) BS01 NAD 2.3.3.16 GO:0004108 ... P0ABH7 12824188 MOAD: Kd=1.16uM
    38904 1owb:B (2.2) BS01 NAD 2.3.3.16 GO:0004108 ... P0ABH7 12824188 MOAD: Kd=1.16uM
    38905 1owd:A (2.32) BS01 497 3.4.21.73 GO:0004252 ... P00749 14711304 MOAD: Ki=6.3nM
    BindingDB: Ki=6.3nM
    38906 1owe:A (1.6) BS01 675 3.4.21.73 GO:0004252 ... P00749 14711304 MOAD: Ki=0.631uM
    BindingDB: Ki=631nM, IC50=13000nM
    38907 1owf:A (1.95) BS01 dna ? GO:0000976 ... P0A6X7 12842466
    38908 1owf:A (1.95) BS02 dna ? GO:0000976 ... P0A6X7 12842466
    38909 1owf:A (1.95) BS03 dna ? GO:0000976 ... P0A6X7 12842466
    38910 1owf:B (1.95) BS01 dna ? GO:0003677 ... P0A6Y1 12842466
    38911 1owf:B (1.95) BS02 dna ? GO:0003677 ... P0A6Y1 12842466
    38912 1owg:A (2.1) BS01 dna ? GO:0000976 ... P0A6X7 12842466
    38913 1owg:A (2.1) BS02 dna ? GO:0000976 ... P0A6X7 12842466
    38914 1owg:A (2.1) BS03 dna ? GO:0000976 ... P0A6X7 12842466
    38915 1owg:B (2.1) BS01 dna ? GO:0003677 ... P0A6Y1 12842466
    38916 1owg:B (2.1) BS02 dna ? GO:0003677 ... P0A6Y1 12842466
    38917 1owh:A (1.61) BS01 239 3.4.21.73 GO:0004252 ... P00749 14711304 MOAD: Ki=40nM
    BindingDB: Ki=40nM, IC50=1200nM
    38918 1owi:A (2.93) BS01 426 3.4.21.73 GO:0004252 ... P00749 14711304 BindingDB: Ki=25nM
    38919 1owj:A (3.1) BS01 155 3.4.21.73 GO:0004252 ... P00749 14711304 BindingDB: Ki=48nM
    38920 1owk:A (2.8) BS01 303 3.4.21.73 GO:0004252 ... P00749 14711304 BindingDB: Ki=23.5nM
    38921 1owl:A (1.8) BS01 PO4 4.1.99.3 GO:0000166 ... P05327 15213381
    38922 1owl:A (1.8) BS02 PO4 4.1.99.3 GO:0000166 ... P05327 15213381
    38923 1owl:A (1.8) BS03 FAD 4.1.99.3 GO:0000166 ... P05327 15213381
    38924 1owm:A (2.3) BS01 PO4 4.1.99.3 GO:0000166 ... P05327 15213381
    38925 1owm:A (2.3) BS02 FAD 4.1.99.3 GO:0000166 ... P05327 15213381
    38926 1own:A (2.3) BS01 PO4 4.1.99.3 GO:0000166 ... P05327 15213381
    38927 1own:A (2.3) BS02 FAD 4.1.99.3 GO:0000166 ... P05327 15213381
    38928 1owo:A (2.3) BS01 PO4 4.1.99.3 GO:0000166 ... P05327 15213381
    38929 1owo:A (2.3) BS02 FAD 4.1.99.3 GO:0000166 ... P05327 15213381
    38930 1owp:A (2.3) BS01 PO4 4.1.99.3 GO:0000166 ... P05327 15213381
    38931 1owp:A (2.3) BS02 FAD 4.1.99.3 GO:0000166 ... P05327 15213381
    38932 1owr:M (3.0) BS01 dna ? GO:0003677 ... Q13469 14643663
    38933 1owr:M (3.0) BS02 dna ? GO:0003677 ... Q13469 14643663
    38934 1owr:N (3.0) BS01 dna ? GO:0003677 ... Q13469 14643663
    38935 1owr:N (3.0) BS02 dna ? GO:0003677 ... Q13469 14643663
    38936 1owr:P (3.0) BS01 dna ? GO:0003677 ... Q13469 14643663
    38937 1owr:P (3.0) BS02 dna ? GO:0003677 ... Q13469 14643663
    38938 1owr:Q (3.0) BS01 dna ? GO:0003677 ... Q13469 14643663
    38939 1owr:Q (3.0) BS02 dna ? GO:0003677 ... Q13469 14643663
    38940 1owy:A (1.9) BS01 PRY 3.2.1.17 GO:0003796 ... P00720 15046985
    38941 1owz:A (1.9) BS01 4FA 3.2.1.17 GO:0003796 ... P00720 15046985
    38942 1ox0:A (1.3) BS01 MG 2.3.1.179 GO:0004315 ... Q9FBC2 12837788
    38943 1ox1:A (2.0) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 N/A
    38944 1ox1:A (2.0) BS02 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    38945 1ox4:A (2.5) BS01 POP 3.5.1.2
    4.3.2.10
    GO:0000105 ... P33734 12795595
    38946 1ox4:B (2.5) BS01 POP 3.5.1.2
    4.3.2.10
    GO:0000105 ... P33734 12795595
    38947 1ox5:A (2.5) BS01 1PR 3.5.1.2
    4.3.2.10
    GO:0000105 ... P33734 12795595
    38948 1ox5:B (2.5) BS01 1PR 3.5.1.2
    4.3.2.10
    GO:0000105 ... P33734 12795595
    38949 1ox6:B (2.4) BS01 POP 3.5.1.2
    4.3.2.10
    GO:0000105 ... P33734 12795595
    38950 1ox7:A (1.43) BS01 ZN 3.5.4.1 GO:0003824 ... Q12178 12906827
    38951 1ox7:B (1.43) BS01 ZN 3.5.4.1 GO:0003824 ... Q12178 12906827
    38952 1ox9:A (2.9) BS01 peptide ? N/A P0AFZ3 12887894
    38953 1ox9:B (2.9) BS01 peptide ? N/A P0AFZ3 12887894
    38954 1ox9:B (2.9) BS02 peptide ? N/A P0AFZ3 12887894
    38955 1ox9:C (2.9) BS01 peptide ? N/A P0AFZ3 12887894
    38956 1ox9:D (2.9) BS01 peptide ? N/A P0AFZ3 12887894
    38957 1ox9:E (2.9) BS01 peptide ? N/A P0AFZ3 12887894
    38958 1ox9:F (2.9) BS01 peptide ? N/A P0AFZ3 12887894
    38959 1ox9:G (2.9) BS01 peptide ? N/A P0AFZ3 12887894
    38960 1ox9:H (2.9) BS01 peptide ? N/A P0AFZ3 12887894
    38961 1oxa:A (2.1) BS01 HEM 1.14.15.35 GO:0004497 ... Q00441 7749919
    38962 1oxa:A (2.1) BS02 DEB 1.14.15.35 GO:0004497 ... Q00441 7749919
    38963 1oxc:A (1.2) BS01 FUL ? GO:0030246 ... Q9HYN5 12909014
    38964 1oxc:A (1.2) BS02 FUC ? GO:0030246 ... Q9HYN5 12909014
    38965 1oxc:A (1.2) BS03 CA ? GO:0030246 ... Q9HYN5 12909014
    38966 1oxc:A (1.2) BS04 CA ? GO:0030246 ... Q9HYN5 12909014
    38967 1oxc:B (1.2) BS01 FUC ? GO:0030246 ... Q9HYN5 12909014
    38968 1oxc:B (1.2) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38969 1oxc:B (1.2) BS03 CA ? GO:0030246 ... Q9HYN5 12909014
    38970 1oxc:C (1.2) BS01 FUC ? GO:0030246 ... Q9HYN5 12909014
    38971 1oxc:C (1.2) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38972 1oxc:C (1.2) BS03 CA ? GO:0030246 ... Q9HYN5 12909014
    38973 1oxc:D (1.2) BS01 FUL ? GO:0030246 ... Q9HYN5 12909014
    38974 1oxc:D (1.2) BS02 CA ? GO:0030246 ... Q9HYN5 12909014
    38975 1oxc:D (1.2) BS03 FUC ? GO:0030246 ... Q9HYN5 12909014
    38976 1oxc:D (1.2) BS04 CA ? GO:0030246 ... Q9HYN5 12909014
    38977 1oxg:A (2.2) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 15654893
    38978 1oxh:A (2.09) BS01 MG 2.3.1.179 GO:0004315 ... Q9FBC2 12837788
    38979 1oxh:B (2.09) BS01 MG 2.3.1.179 GO:0004315 ... Q9FBC2 12837788
    38980 1oxh:C (2.09) BS01 MG 2.3.1.179 GO:0004315 ... Q9FBC2 12837788
    38981 1oxh:D (2.09) BS01 MG 2.3.1.179 GO:0004315 ... Q9FBC2 12837788
    38982 1oxl:A (1.8) BS01 IDA 3.1.1.4 GO:0004623 ... P59071 16122995
    38983 1oxm:A (2.3) BS01 TC4 3.1.1.74 GO:0005576 ... P00590 9041628
    38984 1oxm:B (2.3) BS01 TC4 3.1.1.74 GO:0005576 ... P00590 9041628
    38985 1oxm:B (2.3) BS02 TC4 3.1.1.74 GO:0005576 ... P00590 9041628
    38986 1oxn:A (2.2) BS01 ZN 2.3.2.27 N/A Q96CA5 12846571
    38987 1oxn:B (2.2) BS01 ZN 2.3.2.27 N/A Q96CA5 12846571
    38988 1oxn:C (2.2) BS01 ZN 2.3.2.27 N/A Q96CA5 12846571
    38989 1oxn:D (2.2) BS01 ZN 2.3.2.27 N/A Q96CA5 12846571
    38990 1oxn:E (2.2) BS01 peptide 2.3.2.27 N/A Q96CA5 12846571
    38991 1oxn:E (2.2) BS02 ZN 2.3.2.27 N/A Q96CA5 12846571
    38992 1oxo:A (2.3) BS01 IK2 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8665890
    38993 1oxo:B (2.3) BS01 IK2 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8665890
    38994 1oxp:A (2.5) BS01 IK2 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8665890
    38995 1oxq:A (2.3) BS01 ZN 2.3.2.27 N/A Q96CA5 12846571
    38996 1oxq:B (2.3) BS01 ZN 2.3.2.27 N/A Q96CA5 12846571
    38997 1oxq:C (2.3) BS01 ZN 2.3.2.27 N/A Q96CA5 12846571
    38998 1oxq:D (2.3) BS01 ZN 2.3.2.27 N/A Q96CA5 12846571
    38999 1oxq:E (2.3) BS01 peptide 2.3.2.27 N/A Q96CA5 12846571
    39000 1oxq:E (2.3) BS02 ZN 2.3.2.27 N/A Q96CA5 12846571

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).