SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    39801 1opo:B (3.2) BS01 CA ? GO:0003723 ... P04383 8307192
    39802 1opo:C (3.2) BS01 CA ? GO:0003723 ... P04383 8307192
    39803 1opr:A (2.3) BS01 ORO 2.4.2.10 GO:0000287 ... P08870 7545004
    39804 1opr:A (2.3) BS02 PRP 2.4.2.10 GO:0000287 ... P08870 7545004
    39805 1oq4:A (2.4) BS01 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39806 1oq4:A (2.4) BS02 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39807 1oq4:A (2.4) BS03 AZI 1.14.19.2 GO:0005515 ... P22337 12704186
    39808 1oq4:B (2.4) BS01 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39809 1oq4:B (2.4) BS02 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39810 1oq4:B (2.4) BS03 AZI 1.14.19.2 GO:0005515 ... P22337 12704186
    39811 1oq4:C (2.4) BS01 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39812 1oq4:C (2.4) BS02 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39813 1oq4:C (2.4) BS03 AZI 1.14.19.2 GO:0005515 ... P22337 12704186
    39814 1oq4:D (2.4) BS01 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39815 1oq4:D (2.4) BS02 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39816 1oq4:D (2.4) BS03 AZI 1.14.19.2 GO:0005515 ... P22337 12704186
    39817 1oq4:E (2.4) BS01 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39818 1oq4:E (2.4) BS02 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39819 1oq4:E (2.4) BS03 AZI 1.14.19.2 GO:0005515 ... P22337 12704186
    39820 1oq4:F (2.4) BS01 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39821 1oq4:F (2.4) BS02 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39822 1oq4:F (2.4) BS03 AZI 1.14.19.2 GO:0005515 ... P22337 12704186
    39823 1oq5:A (1.5) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 14736236
    39824 1oq5:A (1.5) BS02 CEL 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 14736236 MOAD: ic50=21nM
    BindingDB: Ki=21nM, IC50=21nM
    39825 1oq6:A (-1.00) BS01 CU 7.2.2.8 GO:0046872 ... O32220 12888353
    39826 1oq9:A (2.4) BS01 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39827 1oq9:A (2.4) BS02 FE 1.14.19.2 GO:0005515 ... P22337 12704186
    39828 1oq9:A (2.4) BS03 ACT 1.14.19.2 GO:0005515 ... P22337 12704186
    39829 1oqb:A (2.8) BS01 FE2 1.14.19.2 GO:0005515 ... P22337 12704186
    39830 1oqb:B (2.8) BS01 FE2 1.14.19.2 GO:0005515 ... P22337 12704186
    39831 1oqb:C (2.8) BS01 FE2 1.14.19.2 GO:0005515 ... P22337 12704186
    39832 1oqb:D (2.8) BS01 FE2 1.14.19.2 GO:0005515 ... P22337 12704186
    39833 1oqb:E (2.8) BS01 FE2 1.14.19.2 GO:0005515 ... P22337 12704186
    39834 1oqb:F (2.8) BS01 FE2 1.14.19.2 GO:0005515 ... P22337 12704186
    39835 1oqc:A (1.8) BS01 FAD 1.8.3.2 GO:0016971 ... Q63042 N/A
    39836 1oqc:B (1.8) BS01 FAD 1.8.3.2 GO:0016971 ... Q63042 N/A
    39837 1oqc:C (1.8) BS01 FAD 1.8.3.2 GO:0016971 ... Q63042 N/A
    39838 1oqc:D (1.8) BS01 FAD 1.8.3.2 GO:0016971 ... Q63042 N/A
    39839 1oqd:E (2.6) BS01 peptide ? GO:0005164 ... Q9Y275 12721620
    39840 1oqd:F (2.6) BS01 peptide ? GO:0005164 ... Q9Y275 12721620
    39841 1oqe:E (2.5) BS01 peptide ? GO:0005164 ... Q9Y275 12721620
    39842 1oqe:F (2.5) BS01 peptide ? GO:0005164 ... Q9Y275 12721620
    39843 1oqg:A (1.9) BS01 CO3 ? GO:0005576 ... P02787 12795604
    39844 1oqg:A (1.9) BS02 FE ? GO:0005576 ... P02787 12795604
    39845 1oqh:A (2.4) BS01 CO3 ? GO:0005576 ... P02787 12795604
    39846 1oqh:A (2.4) BS02 FE ? GO:0005576 ... P02787 12795604
    39847 1oqj:A (1.55) BS01 ZN ? GO:0003677 ... Q9Y692 12702733
    39848 1oqj:B (1.55) BS01 ZN ? GO:0003677 ... Q9Y692 12702733
    39849 1oql:B (3.0) BS01 GAL 3.2.2.22 N/A P81446 12823544
    39850 1oql:B (3.0) BS02 GAL 3.2.2.22 N/A P81446 12823544
    39851 1oqm:A (2.1) BS01 CA ? GO:0003796 ... P29752 11916963
    39852 1oqm:B (2.1) BS01 MN 2.4.1.-
    2.4.1.22
    2.4.1.275
    2.4.1.38
    2.4.1.90
    GO:0005975 ... P08037 11916963
    39853 1oqm:B (2.1) BS02 UD2 2.4.1.-
    2.4.1.22
    2.4.1.275
    2.4.1.38
    2.4.1.90
    GO:0005975 ... P08037 11916963
    39854 1oqm:C (2.1) BS01 CA ? GO:0003796 ... P29752 11916963
    39855 1oqm:D (2.1) BS01 MN 2.4.1.-
    2.4.1.22
    2.4.1.275
    2.4.1.38
    2.4.1.90
    GO:0005975 ... P08037 11916963
    39856 1oqm:D (2.1) BS02 UD2 2.4.1.-
    2.4.1.22
    2.4.1.275
    2.4.1.38
    2.4.1.90
    GO:0005975 ... P08037 11916963
    39857 1oqn:A (2.3) BS01 peptide ? N/A P97318 12826668
    39858 1oqn:A (2.3) BS02 I3P ? N/A P97318 12826668
    39859 1oqn:B (2.3) BS01 peptide ? N/A P97318 12826668
    39860 1oqn:B (2.3) BS02 I3P ? N/A P97318 12826668
    39861 1oqo:A (2.3) BS01 BMA ? N/A P01857 N/A
    39862 1oqp:A (-1.00) BS01 peptide ? GO:0005509 ... P05434 12842464
    39863 1oqq:A (1.47) BS01 FES ? GO:0005515 ... P00259 14529624
    39864 1oqq:B (1.47) BS01 FES ? GO:0005515 ... P00259 14529624
    39865 1oqr:A (1.65) BS01 FES ? GO:0005515 ... P00259 14529624
    39866 1oqr:B (1.65) BS01 FES ? GO:0005515 ... P00259 14529624
    39867 1oqr:C (1.65) BS01 FES ? GO:0005515 ... P00259 14529624
    39868 1oqu:A (2.0) BS01 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39869 1oqu:A (2.0) BS02 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39870 1oqu:A (2.0) BS03 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39871 1oqu:A (2.0) BS04 OXY 1.17.4.1 GO:0004748 ... O69274 15178319
    39872 1oqu:B (2.0) BS01 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39873 1oqu:B (2.0) BS02 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39874 1oqu:C (2.0) BS01 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39875 1oqu:C (2.0) BS02 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39876 1oqu:C (2.0) BS03 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39877 1oqu:C (2.0) BS04 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39878 1oqu:C (2.0) BS05 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39879 1oqu:C (2.0) BS06 OXY 1.17.4.1 GO:0004748 ... O69274 15178319
    39880 1oqu:D (2.0) BS01 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39881 1oqu:D (2.0) BS02 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39882 1oqu:D (2.0) BS03 FE 1.17.4.1 GO:0004748 ... O69274 15178319
    39883 1oqu:D (2.0) BS04 OXY 1.17.4.1 GO:0004748 ... O69274 15178319
    39884 1oqx:B (2.6) BS01 BMA ? N/A P01857 N/A
    39885 1or4:A (2.15) BS01 HEM ? GO:0019825 ... O07621 12962628
    39886 1or4:B (2.15) BS01 HEM ? GO:0019825 ... O07621 12962628
    39887 1or6:A (2.71) BS01 HEM ? GO:0019825 ... O07621 12962628
    39888 1or6:B (2.71) BS01 HEM ? GO:0019825 ... O07621 12962628
    39889 1or8:A (2.35) BS01 peptide 2.1.1.319 GO:0005515 ... Q63009 12737817
    39890 1or8:A (2.35) BS02 peptide 2.1.1.319 GO:0005515 ... Q63009 12737817
    39891 1or8:A (2.35) BS03 peptide 2.1.1.319 GO:0005515 ... Q63009 12737817
    39892 1or8:A (2.35) BS04 peptide 2.1.1.319 GO:0005515 ... Q63009 12737817
    39893 1or8:A (2.35) BS05 SAH 2.1.1.319 GO:0005515 ... Q63009 12737817
    39894 1orb:A (2.0) BS01 ACT 2.8.1.1 GO:0004792 ... P00586 8702871
    39895 1ord:A (3.0) BS01 PLP 4.1.1.17 GO:0003824 ... P43099 7563080
    39896 1ord:A (3.0) BS02 PLP 4.1.1.17 GO:0003824 ... P43099 7563080
    39897 1ord:B (3.0) BS01 PLP 4.1.1.17 GO:0003824 ... P43099 7563080
    39898 1ord:B (3.0) BS02 PLP 4.1.1.17 GO:0003824 ... P43099 7563080
    39899 1ore:A (2.1) BS01 AMP 2.4.2.7 GO:0002055 ... P07741 15196008
    39900 1orf:A (2.4) BS01 0G6 3.4.21.78 GO:0001772 ... P12544 12819769
    39901 1orh:A (2.64) BS01 peptide 2.1.1.319 GO:0005515 ... Q63009 12737817
    39902 1orh:A (2.64) BS02 SAH 2.1.1.319 GO:0005515 ... Q63009 12737817
    39903 1ori:A (2.5) BS01 SAH 2.1.1.319 GO:0005515 ... Q63009 12737817
    39904 1ork:A (2.4) BS01 ATC ? GO:0000976 ... P0ACT4 9878420 MOAD: Kd=1.56nM
    39905 1orn:A (1.7) BS01 dna N/A GO:0003677 ... N/A 12840008
    39906 1orn:A (1.7) BS02 dna N/A GO:0003677 ... N/A 12840008
    39907 1orn:A (1.7) BS03 SF4 N/A GO:0003677 ... N/A 12840008
    39908 1oro:A (2.4) BS01 SO4 2.4.2.10 GO:0000287 ... P0A7E3 8620002
    39909 1orp:A (2.2) BS01 dna N/A GO:0003677 ... N/A 12840008
    39910 1orp:A (2.2) BS02 dna N/A GO:0003677 ... N/A 12840008
    39911 1orp:A (2.2) BS03 SF4 N/A GO:0003677 ... N/A 12840008
    39912 1orr:A (1.5) BS01 NAD 5.1.3.10 GO:0047732 ... P14169 12642575
    39913 1orr:A (1.5) BS02 CDP 5.1.3.10 GO:0047732 ... P14169 12642575
    39914 1orr:B (1.5) BS01 NAD 5.1.3.10 GO:0047732 ... P14169 12642575
    39915 1orr:B (1.5) BS02 CDP 5.1.3.10 GO:0047732 ... P14169 12642575
    39916 1orr:C (1.5) BS01 NAD 5.1.3.10 GO:0047732 ... P14169 12642575
    39917 1orr:C (1.5) BS02 CDP 5.1.3.10 GO:0047732 ... P14169 12642575
    39918 1orr:D (1.5) BS01 NAD 5.1.3.10 GO:0047732 ... P14169 12642575
    39919 1orr:D (1.5) BS02 CDP 5.1.3.10 GO:0047732 ... P14169 12642575
    39920 1orw:A (2.84) BS01 PHI 3.4.14.5 GO:0001618 ... P22411 12690074
    39921 1orw:A (2.84) BS02 P2Y 3.4.14.5 GO:0001618 ... P22411 12690074
    39922 1orw:B (2.84) BS01 PHI 3.4.14.5 GO:0001618 ... P22411 12690074
    39923 1orw:B (2.84) BS02 P2Y 3.4.14.5 GO:0001618 ... P22411 12690074
    39924 1orw:C (2.84) BS01 PHI 3.4.14.5 GO:0001618 ... P22411 12690074
    39925 1orw:C (2.84) BS02 P2Y 3.4.14.5 GO:0001618 ... P22411 12690074
    39926 1orw:D (2.84) BS01 PHI 3.4.14.5 GO:0001618 ... P22411 12690074
    39927 1orw:D (2.84) BS02 P2Y 3.4.14.5 GO:0001618 ... P22411 12690074
    39928 1os0:A (2.1) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 12832763
    39929 1os0:A (2.1) BS02 CA 3.4.24.27 GO:0004222 ... P00800 12832763
    39930 1os0:A (2.1) BS03 CA 3.4.24.27 GO:0004222 ... P00800 12832763
    39931 1os0:A (2.1) BS04 CA 3.4.24.27 GO:0004222 ... P00800 12832763
    39932 1os0:A (2.1) BS05 CA 3.4.24.27 GO:0004222 ... P00800 12832763
    39933 1os0:A (2.1) BS06 0PQ 3.4.24.27 GO:0004222 ... P00800 12832763 MOAD: Ki=0.93uM
    39934 1os1:A (1.8) BS01 CA 4.1.1.49 GO:0000287 ... P22259 12837799
    39935 1os1:A (1.8) BS02 ATP 4.1.1.49 GO:0000287 ... P22259 12837799
    39936 1os1:A (1.8) BS03 PYR 4.1.1.49 GO:0000287 ... P22259 12837799
    39937 1os2:A (2.15) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39938 1os2:A (2.15) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39939 1os2:A (2.15) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39940 1os2:A (2.15) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39941 1os2:A (2.15) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39942 1os2:B (2.15) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39943 1os2:B (2.15) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39944 1os2:B (2.15) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39945 1os2:B (2.15) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39946 1os2:B (2.15) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39947 1os2:C (2.15) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39948 1os2:C (2.15) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39949 1os2:C (2.15) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39950 1os2:C (2.15) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39951 1os2:C (2.15) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39952 1os2:C (2.15) BS06 AZI 3.4.24.65 GO:0004222 ... P39900 12813751
    39953 1os2:D (2.15) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39954 1os2:D (2.15) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39955 1os2:D (2.15) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39956 1os2:D (2.15) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39957 1os2:D (2.15) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39958 1os2:E (2.15) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39959 1os2:E (2.15) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39960 1os2:E (2.15) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39961 1os2:E (2.15) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39962 1os2:E (2.15) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39963 1os2:F (2.15) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39964 1os2:F (2.15) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39965 1os2:F (2.15) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39966 1os2:F (2.15) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39967 1os2:F (2.15) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39968 1os5:A (2.2) BS01 NH1 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0003723 ... P26663 12805457 MOAD: Kd=0.14uM
    39969 1os6:A (1.45) BS01 HEC ? GO:0009055 ... Q8GGK7 14744127
    39970 1os6:A (1.45) BS02 HEC ? GO:0009055 ... Q8GGK7 14744127
    39971 1os6:A (1.45) BS03 HEC ? GO:0009055 ... Q8GGK7 14744127
    39972 1os6:A (1.45) BS04 DXC ? GO:0009055 ... Q8GGK7 14744127
    39973 1os7:A (2.5) BS01 FE2 1.14.11.17 GO:0000908 ... P37610 12741810
    39974 1os7:A (2.5) BS02 AKG 1.14.11.17 GO:0000908 ... P37610 12741810
    39975 1os7:B (2.5) BS01 FE2 1.14.11.17 GO:0000908 ... P37610 12741810
    39976 1os7:B (2.5) BS02 AKG 1.14.11.17 GO:0000908 ... P37610 12741810
    39977 1os7:C (2.5) BS01 FE2 1.14.11.17 GO:0000908 ... P37610 12741810
    39978 1os7:C (2.5) BS02 AKG 1.14.11.17 GO:0000908 ... P37610 12741810
    39979 1os7:D (2.5) BS01 FE2 1.14.11.17 GO:0000908 ... P37610 12741810
    39980 1os7:D (2.5) BS02 AKG 1.14.11.17 GO:0000908 ... P37610 12741810
    39981 1os8:A (1.55) BS01 CA 3.4.21.4 GO:0004252 ... P00775 12885239
    39982 1os9:A (1.85) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39983 1os9:A (1.85) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39984 1os9:A (1.85) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39985 1os9:A (1.85) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39986 1os9:A (1.85) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39987 1os9:B (1.85) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39988 1os9:B (1.85) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39989 1os9:B (1.85) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39990 1os9:B (1.85) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39991 1os9:B (1.85) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39992 1os9:C (1.85) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39993 1os9:C (1.85) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39994 1os9:C (1.85) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39995 1os9:C (1.85) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39996 1os9:C (1.85) BS05 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    39997 1os9:D (1.85) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39998 1os9:D (1.85) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 12813751
    39999 1os9:D (1.85) BS03 CA 3.4.24.65 GO:0004222 ... P39900 12813751
    40000 1os9:D (1.85) BS04 CA 3.4.24.65 GO:0004222 ... P39900 12813751

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).