SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    41201 1p72:B (2.1) BS02 THM 2.7.1.21 GO:0000166 ... P24425 14527394
    41202 1p73:A (2.7) BS01 4TA 2.7.1.21 GO:0000166 ... P24425 14527394
    41203 1p73:B (2.7) BS01 4TA 2.7.1.21 GO:0000166 ... P24425 14527394
    41204 1p73:C (2.7) BS01 4TA 2.7.1.21 GO:0000166 ... P24425 14527394
    41205 1p73:D (2.7) BS01 4TA 2.7.1.21 GO:0000166 ... P24425 14527394
    41206 1p75:A (3.02) BS01 T5A 2.7.1.21 GO:0000166 ... P24425 14527394
    41207 1p75:B (3.02) BS01 T5A 2.7.1.21 GO:0000166 ... P24425 14527394
    41208 1p75:C (3.02) BS01 T5A 2.7.1.21 GO:0000166 ... P24425 14527394
    41209 1p75:D (3.02) BS01 T5A 2.7.1.21 GO:0000166 ... P24425 14527394
    41210 1p77:A (1.95) BS01 ATR 1.1.1.25 GO:0004764 ... P43876 12837789
    41211 1p78:A (2.25) BS01 dna ? GO:0003677 ... P05514 12853489
    41212 1p78:A (2.25) BS02 dna ? GO:0003677 ... P05514 12853489
    41213 1p78:B (2.25) BS01 dna ? GO:0003677 ... P05514 12853489
    41214 1p78:B (2.25) BS02 dna ? GO:0003677 ... P05514 12853489
    41215 1p7a:A (-1.00) BS01 ZN ? N/A Q60980 12736264
    41216 1p7c:A (2.1) BS01 T5A 2.7.1.21 GO:0000166 ... P0DTH5 14527394
    41217 1p7c:B (2.1) BS01 THM 2.7.1.21 GO:0000166 ... P0DTH5 14527394
    41218 1p7d:A (2.95) BS01 dna 2.7.7.-
    3.1.-.-
    GO:0003677 ... P03700 12887904
    41219 1p7d:A (2.95) BS02 dna 2.7.7.-
    3.1.-.-
    GO:0003677 ... P03700 12887904
    41220 1p7d:B (2.95) BS01 dna 2.7.7.-
    3.1.-.-
    GO:0003677 ... P03700 12887904
    41221 1p7d:B (2.95) BS02 dna 2.7.7.-
    3.1.-.-
    GO:0003677 ... P03700 12887904
    41222 1p7h:L (2.6) BS01 dna ? GO:0003677 ... Q13469 12949493
    41223 1p7h:L (2.6) BS02 dna ? GO:0003677 ... Q13469 12949493
    41224 1p7h:M (2.6) BS01 dna ? GO:0003677 ... Q13469 12949493
    41225 1p7h:M (2.6) BS02 dna ? GO:0003677 ... Q13469 12949493
    41226 1p7h:N (2.6) BS01 dna ? GO:0003677 ... Q13469 12949493
    41227 1p7h:N (2.6) BS02 dna ? GO:0003677 ... Q13469 12949493
    41228 1p7h:O (2.6) BS01 dna ? GO:0003677 ... Q13469 12949493
    41229 1p7h:O (2.6) BS02 dna ? GO:0003677 ... Q13469 12949493
    41230 1p7k:A (1.75) BS01 SO4 ? GO:0002250 ... P01837 15340914
    41231 1p7k:A (1.75) BS02 EPE ? GO:0002250 ... P01837 15340914
    41232 1p7k:B (1.75) BS01 SO4 ? N/A P01868 15340914
    41233 1p7k:H (1.75) BS01 SO4 ? N/A P01868 15340914
    41234 1p7k:H (1.75) BS02 SO4 ? N/A P01868 15340914
    41235 1p7k:H (1.75) BS03 SO4 ? N/A P01868 15340914
    41236 1p7k:H (1.75) BS04 SO4 ? N/A P01868 15340914
    41237 1p7k:L (1.75) BS01 EPE ? GO:0002250 ... P01837 15340914
    41238 1p7l:A (2.5) BS01 ANP 2.5.1.6 GO:0000287 ... P0A817 14967023
    41239 1p7l:A (2.5) BS02 MET 2.5.1.6 GO:0000287 ... P0A817 14967023
    41240 1p7l:A (2.5) BS03 ANP 2.5.1.6 GO:0000287 ... P0A817 14967023
    41241 1p7l:B (2.5) BS01 ANP 2.5.1.6 GO:0000287 ... P0A817 14967023
    41242 1p7l:B (2.5) BS02 MET 2.5.1.6 GO:0000287 ... P0A817 14967023
    41243 1p7l:B (2.5) BS03 ANP 2.5.1.6 GO:0000287 ... P0A817 14967023
    41244 1p7l:C (2.5) BS01 SAM 2.5.1.6 GO:0000287 ... P0A817 14967023
    41245 1p7l:C (2.5) BS02 SAM 2.5.1.6 GO:0000287 ... P0A817 14967023
    41246 1p7l:C (2.5) BS03 PPK 2.5.1.6 GO:0000287 ... P0A817 14967023
    41247 1p7l:C (2.5) BS04 PPK 2.5.1.6 GO:0000287 ... P0A817 14967023
    41248 1p7l:D (2.5) BS01 SAM 2.5.1.6 GO:0000287 ... P0A817 14967023
    41249 1p7l:D (2.5) BS02 SAM 2.5.1.6 GO:0000287 ... P0A817 14967023
    41250 1p7l:D (2.5) BS03 PPK 2.5.1.6 GO:0000287 ... P0A817 14967023
    41251 1p7l:D (2.5) BS04 PPK 2.5.1.6 GO:0000287 ... P0A817 14967023
    41252 1p7m:A (-1.00) BS01 ZN 3.2.2.20 GO:0003824 ... P05100 13129925
    41253 1p7m:A (-1.00) BS02 ADK 3.2.2.20 GO:0003824 ... P05100 13129925 BindingDB: IC50=1500000nM
    41254 1p7p:A (1.8) BS01 ZN 6.1.1.10 GO:0000166 ... P00959 12946347
    41255 1p7p:A (1.8) BS02 MPH 6.1.1.10 GO:0000166 ... P00959 12946347
    41256 1p7q:A (3.4) BS01 peptide ? N/A P04439 12897781
    41257 1p7r:A (2.85) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 14556625
    41258 1p7r:A (2.85) BS02 NCT 1.14.15.1 GO:0004497 ... P00183 14556625
    41259 1p7t:A (1.95) BS01 MG 2.3.3.9 GO:0000287 ... P37330 12930982
    41260 1p7t:A (1.95) BS02 ACO 2.3.3.9 GO:0000287 ... P37330 12930982
    41261 1p7t:A (1.95) BS03 PYR 2.3.3.9 GO:0000287 ... P37330 12930982 MOAD: Ki=1mM
    41262 1p7t:B (1.95) BS01 MG 2.3.3.9 GO:0000287 ... P37330 12930982
    41263 1p7t:B (1.95) BS02 ACO 2.3.3.9 GO:0000287 ... P37330 12930982
    41264 1p7t:B (1.95) BS03 PYR 2.3.3.9 GO:0000287 ... P37330 12930982 MOAD: Ki=1mM
    41265 1p7v:A (1.08) BS01 peptide 3.4.21.64 GO:0004252 ... P06873 N/A
    41266 1p7v:A (1.08) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    41267 1p7w:A (1.02) BS01 peptide 3.4.21.64 GO:0004252 ... P06873 N/A
    41268 1p7w:A (1.02) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    41269 1p7y:A (2.4) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41270 1p7y:B (2.4) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41271 1p7y:C (2.4) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41272 1p7y:D (2.4) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41273 1p7z:A (2.21) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41274 1p7z:B (2.21) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41275 1p7z:C (2.21) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41276 1p7z:D (2.21) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41277 1p80:A (1.65) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41278 1p80:B (1.65) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41279 1p80:C (1.65) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41280 1p80:D (1.65) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 12777389
    41281 1p81:A (1.81) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 12777389
    41282 1p81:B (1.81) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 12777389
    41283 1p81:C (1.81) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 12777389
    41284 1p81:D (1.81) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 12777389
    41285 1p84:C (2.5) BS01 HEC 7.1.1.8 GO:0005739 ... P00163 12782631
    41286 1p84:C (2.5) BS02 HEC 7.1.1.8 GO:0005739 ... P00163 12782631
    41287 1p84:C (2.5) BS03 DBT 7.1.1.8 GO:0005739 ... P00163 12782631
    41288 1p84:C (2.5) BS04 UQ6 7.1.1.8 GO:0005739 ... P00163 12782631
    41289 1p84:D (2.5) BS01 HEC 7.1.1.8 GO:0009055 ... P07143 12782631
    41290 1p84:E (2.5) BS01 FES 7.1.1.8 GO:0008121 ... P08067 12782631
    41291 1p8d:A (2.8) BS01 peptide ? GO:0003677 ... P55055 12736258
    41292 1p8d:A (2.8) BS02 CO1 ? GO:0003677 ... P55055 12736258 BindingDB: EC50=286nM
    41293 1p8d:B (2.8) BS01 peptide ? GO:0003677 ... P55055 12736258
    41294 1p8d:B (2.8) BS02 CO1 ? GO:0003677 ... P55055 12736258 BindingDB: EC50=286nM
    41295 1p8h:A (1.52) BS01 RET ? GO:0005216 ... P02945 12842471
    41296 1p8i:A (1.86) BS01 RET ? GO:0005216 ... P02945 12842471
    41297 1p8j:A (2.6) BS01 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41298 1p8j:A (2.6) BS02 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41299 1p8j:A (2.6) BS03 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41300 1p8j:A (2.6) BS04 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41301 1p8j:B (2.6) BS01 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41302 1p8j:B (2.6) BS02 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41303 1p8j:B (2.6) BS03 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41304 1p8j:B (2.6) BS04 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41305 1p8j:C (2.6) BS01 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41306 1p8j:C (2.6) BS02 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41307 1p8j:C (2.6) BS03 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41308 1p8j:C (2.6) BS04 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41309 1p8j:D (2.6) BS01 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41310 1p8j:D (2.6) BS02 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41311 1p8j:D (2.6) BS03 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41312 1p8j:D (2.6) BS04 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41313 1p8j:D (2.6) BS05 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41314 1p8j:E (2.6) BS01 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41315 1p8j:E (2.6) BS02 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41316 1p8j:E (2.6) BS03 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41317 1p8j:E (2.6) BS04 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41318 1p8j:F (2.6) BS01 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41319 1p8j:F (2.6) BS02 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41320 1p8j:F (2.6) BS03 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41321 1p8j:F (2.6) BS04 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41322 1p8j:F (2.6) BS05 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41323 1p8j:G (2.6) BS01 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41324 1p8j:G (2.6) BS02 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41325 1p8j:G (2.6) BS03 FUC 3.4.21.75 GO:0004252 ... P23188 12794637
    41326 1p8j:G (2.6) BS04 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41327 1p8j:G (2.6) BS05 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41328 1p8j:H (2.6) BS01 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41329 1p8j:H (2.6) BS02 peptide 3.4.21.75 GO:0004252 ... P23188 12794637
    41330 1p8j:H (2.6) BS03 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41331 1p8j:H (2.6) BS04 CA 3.4.21.75 GO:0004252 ... P23188 12794637
    41332 1p8k:Z (2.6) BS01 dna 3.1.-.- GO:0004519 ... P03880 14633971
    41333 1p8k:Z (2.6) BS02 dna 3.1.-.- GO:0004519 ... P03880 14633971
    41334 1p8k:Z (2.6) BS03 dna 3.1.-.- GO:0004519 ... P03880 14633971
    41335 1p8k:Z (2.6) BS04 dna 3.1.-.- GO:0004519 ... P03880 14633971
    41336 1p8k:Z (2.6) BS05 MG 3.1.-.- GO:0004519 ... P03880 14633971
    41337 1p8l:A (2.95) BS01 AMP ? GO:0000166 ... O41026 12930960
    41338 1p8m:A (2.84) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41339 1p8m:A (2.84) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41340 1p8m:B (2.84) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41341 1p8m:B (2.84) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41342 1p8m:C (2.84) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41343 1p8m:C (2.84) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41344 1p8n:A (2.9) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41345 1p8n:B (2.9) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41346 1p8n:C (2.9) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41347 1p8o:A (2.96) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41348 1p8o:A (2.96) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41349 1p8o:B (2.96) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41350 1p8o:B (2.96) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41351 1p8o:C (2.96) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41352 1p8o:C (2.96) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41353 1p8p:A (2.5) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41354 1p8p:A (2.5) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41355 1p8p:B (2.5) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41356 1p8p:B (2.5) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41357 1p8p:C (2.5) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41358 1p8p:C (2.5) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41359 1p8q:A (2.95) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41360 1p8q:A (2.95) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41361 1p8q:B (2.95) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41362 1p8q:B (2.95) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41363 1p8q:C (2.95) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41364 1p8q:C (2.95) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41365 1p8r:A (2.5) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41366 1p8r:A (2.5) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41367 1p8r:A (2.5) BS03 S2C 3.5.3.1 GO:0000050 ... P07824 12820884
    41368 1p8r:B (2.5) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41369 1p8r:B (2.5) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41370 1p8r:B (2.5) BS03 S2C 3.5.3.1 GO:0000050 ... P07824 12820884
    41371 1p8s:A (3.2) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41372 1p8s:A (3.2) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41373 1p8s:B (3.2) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41374 1p8s:B (3.2) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41375 1p8s:C (3.2) BS01 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41376 1p8s:C (3.2) BS02 MN 3.5.3.1 GO:0000050 ... P07824 12820884
    41377 1p8u:A (1.62) BS01 RET ? GO:0005216 ... P02945 12842471
    41378 1p8v:C (2.6) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 12855811
    41379 1p8v:C (2.6) BS02 DFP 3.4.21.5 GO:0004252 ... P00734 12855811
    41380 1p8x:A (2.0) BS01 CA ? GO:0051015 ... P06396 14527664
    41381 1p8x:A (2.0) BS02 CA ? GO:0051015 ... P06396 14527664
    41382 1p8x:A (2.0) BS03 CA ? GO:0051015 ... P06396 14527664
    41383 1p8x:B (2.0) BS01 CA ? GO:0051015 ... P06396 14527664
    41384 1p8x:B (2.0) BS02 CA ? GO:0051015 ... P06396 14527664
    41385 1p8x:B (2.0) BS03 CA ? GO:0051015 ... P06396 14527664
    41386 1p8x:C (2.0) BS01 CA ? GO:0051015 ... P06396 14527664
    41387 1p8x:C (2.0) BS02 CA ? GO:0051015 ... P06396 14527664
    41388 1p8x:C (2.0) BS03 CA ? GO:0051015 ... P06396 14527664
    41389 1p8z:A (2.6) BS01 ATP 3.6.4.- GO:0000287 ... P68135 14527665
    41390 1p8z:G (2.6) BS01 CA ? GO:0051015 ... P06396 14527665
    41391 1p91:A (2.8) BS01 ZN 2.1.1.187 GO:0008168 ... P36999 14999102
    41392 1p91:A (2.8) BS02 SAM 2.1.1.187 GO:0008168 ... P36999 14999102
    41393 1p91:B (2.8) BS01 ZN 2.1.1.187 GO:0008168 ... P36999 14999102
    41394 1p91:B (2.8) BS02 SAM 2.1.1.187 GO:0008168 ... P36999 14999102
    41395 1p93:A (2.7) BS01 peptide ? N/A P04150 12686538
    41396 1p93:A (2.7) BS02 peptide ? N/A P04150 12686538
    41397 1p93:A (2.7) BS03 DEX ? N/A P04150 12686538 BindingDB: EC50=2.5nM, Ki=1.2nM, IC50=5nM, Kd=19nM
    41398 1p93:B (2.7) BS01 peptide ? N/A P04150 12686538
    41399 1p93:B (2.7) BS02 DEX ? N/A P04150 12686538 BindingDB: EC50=2.5nM, Ki=1.2nM, IC50=5nM, Kd=19nM
    41400 1p93:C (2.7) BS01 peptide ? N/A P04150 12686538

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).