SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    42201 1pob:A (2.0) BS01 CA 3.1.1.4 GO:0004623 ... P00598 2274787
    42202 1pob:A (2.0) BS02 CA 3.1.1.4 GO:0004623 ... P00598 2274787
    42203 1pob:A (2.0) BS03 GEL 3.1.1.4 GO:0004623 ... P00598 2274787
    42204 1pob:B (2.0) BS01 CA 3.1.1.4 GO:0004623 ... P00598 2274787
    42205 1pob:B (2.0) BS02 CA 3.1.1.4 GO:0004623 ... P00598 2274787
    42206 1pob:B (2.0) BS03 GEL 3.1.1.4 GO:0004623 ... P00598 2274787
    42207 1poc:A (2.0) BS01 CA 3.1.1.4 GO:0004623 ... P00630 2274788
    42208 1poc:A (2.0) BS02 GEL 3.1.1.4 GO:0004623 ... P00630 2274788
    42209 1pod:A (2.1) BS01 CA 3.1.1.4 GO:0004623 ... P14555 1948070
    42210 1poe:A (2.1) BS01 CA 3.1.1.4 GO:0004623 ... P14555 1948070
    42211 1poe:A (2.1) BS02 CA 3.1.1.4 GO:0004623 ... P14555 1948070
    42212 1poe:A (2.1) BS03 GEL 3.1.1.4 GO:0004623 ... P14555 1948070
    42213 1poe:B (2.1) BS01 CA 3.1.1.4 GO:0004623 ... P14555 1948070
    42214 1poe:B (2.1) BS02 CA 3.1.1.4 GO:0004623 ... P14555 1948070
    42215 1poe:B (2.1) BS03 GEL 3.1.1.4 GO:0004623 ... P14555 1948070
    42216 1poh:A (2.0) BS01 SO4 ? GO:0004857 ... P0AA04 8226757
    42217 1poj:A (3.3) BS01 ZN 3.4.19.- GO:0005737 ... P39377 12946361
    42218 1poj:A (3.3) BS02 ZN 3.4.19.- GO:0005737 ... P39377 12946361
    42219 1poj:A (3.3) BS03 AE1 3.4.19.- GO:0005737 ... P39377 12946361
    42220 1poj:B (3.3) BS01 ZN 3.4.19.- GO:0005737 ... P39377 12946361
    42221 1poj:B (3.3) BS02 ZN 3.4.19.- GO:0005737 ... P39377 12946361
    42222 1poj:B (3.3) BS03 AE1 3.4.19.- GO:0005737 ... P39377 12946361
    42223 1pok:A (2.7) BS01 ZN 3.4.19.- GO:0005737 ... P39377 12946361
    42224 1pok:A (2.7) BS02 ZN 3.4.19.- GO:0005737 ... P39377 12946361
    42225 1pok:A (2.7) BS03 ASN 3.4.19.- GO:0005737 ... P39377 12946361
    42226 1pok:B (2.7) BS01 ZN 3.4.19.- GO:0005737 ... P39377 12946361
    42227 1pok:B (2.7) BS02 ZN 3.4.19.- GO:0005737 ... P39377 12946361
    42228 1pok:B (2.7) BS03 ASN 3.4.19.- GO:0005737 ... P39377 12946361
    42229 1poo:A (2.1) BS01 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    42230 1poo:A (2.1) BS02 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    42231 1pop:A (2.1) BS01 peptide 3.4.22.2 GO:0006508 ... P00784 8416808
    42232 1pot:A (1.8) BS01 SPD ? GO:0015846 ... P0AFK9 8897598 MOAD: Kd=3.2uM
    42233 1pow:A (2.5) BS01 MG 1.2.3.3 GO:0000287 ... P37063 8145244
    42234 1pow:A (2.5) BS02 TPP 1.2.3.3 GO:0000287 ... P37063 8145244
    42235 1pow:A (2.5) BS03 FAD 1.2.3.3 GO:0000287 ... P37063 8145244
    42236 1pow:B (2.5) BS01 MG 1.2.3.3 GO:0000287 ... P37063 8145244
    42237 1pow:B (2.5) BS02 TPP 1.2.3.3 GO:0000287 ... P37063 8145244
    42238 1pow:B (2.5) BS03 FAD 1.2.3.3 GO:0000287 ... P37063 8145244
    42239 1pox:A (2.1) BS01 MG 1.2.3.3 GO:0000287 ... P37063 8145244
    42240 1pox:A (2.1) BS02 TPP 1.2.3.3 GO:0000287 ... P37063 8145244
    42241 1pox:A (2.1) BS03 FAD 1.2.3.3 GO:0000287 ... P37063 8145244
    42242 1pox:B (2.1) BS01 MG 1.2.3.3 GO:0000287 ... P37063 8145244
    42243 1pox:B (2.1) BS02 TPP 1.2.3.3 GO:0000287 ... P37063 8145244
    42244 1pox:B (2.1) BS03 FAD 1.2.3.3 GO:0000287 ... P37063 8145244
    42245 1poy:1 (2.5) BS01 SPD ? GO:0015846 ... P0AFK9 8621624 MOAD: Kd=3.2uM
    42246 1poy:2 (2.5) BS01 SPD ? GO:0015846 ... P0AFK9 8621624 MOAD: Kd=3.2uM
    42247 1poy:3 (2.5) BS01 SPD ? GO:0015846 ... P0AFK9 8621624 MOAD: Kd=3.2uM
    42248 1poy:4 (2.5) BS01 SPD ? GO:0015846 ... P0AFK9 8621624 MOAD: Kd=3.2uM
    42249 1pp7:U (2.45) BS01 dna ? N/A Q95VR4 14622596
    42250 1pp7:U (2.45) BS02 dna ? N/A Q95VR4 14622596
    42251 1pp8:F (3.05) BS01 dna ? N/A Q95VR4 14622596
    42252 1pp8:F (3.05) BS02 dna ? N/A Q95VR4 14622596
    42253 1pp8:M (3.05) BS01 dna ? N/A Q95VR4 14622596
    42254 1pp8:M (3.05) BS02 dna ? N/A Q95VR4 14622596
    42255 1pp8:P (3.05) BS01 dna ? N/A Q95VR4 14622596
    42256 1pp8:P (3.05) BS02 dna ? N/A Q95VR4 14622596
    42257 1pp8:U (3.05) BS01 dna ? N/A Q95VR4 14622596
    42258 1pp8:U (3.05) BS02 dna ? N/A Q95VR4 14622596
    42259 1pp9:A (2.1) BS01 JZR 1.10.2.2 GO:0005739 ... P31800 16024040
    42260 1pp9:A (2.1) BS02 AZI 1.10.2.2 GO:0005739 ... P31800 16024040
    42261 1pp9:B (2.1) BS01 JZR 1.10.2.2 GO:0004222 ... P23004 16024040
    42262 1pp9:C (2.1) BS01 HEM 1.10.2.2 GO:0005743 ... P00157 16024040
    42263 1pp9:C (2.1) BS02 HEM 1.10.2.2 GO:0005743 ... P00157 16024040
    42264 1pp9:C (2.1) BS03 SMA 1.10.2.2 GO:0005743 ... P00157 16024040
    42265 1pp9:C (2.1) BS04 UQ 1.10.2.2 GO:0005743 ... P00157 16024040
    42266 1pp9:D (2.1) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 16024040
    42267 1pp9:E (2.1) BS01 FES 7.1.1.8 GO:0008121 ... P13272 16024040
    42268 1pp9:E (2.1) BS02 SMA 7.1.1.8 GO:0008121 ... P13272 16024040
    42269 1pp9:F (2.1) BS01 JZR 1.10.2.2 GO:0005743 ... P00129 16024040
    42270 1pp9:G (2.1) BS01 AZI 1.10.2.2 GO:0005739 ... P13271 16024040
    42271 1pp9:O (2.1) BS01 JZR 1.10.2.2 GO:0004222 ... P23004 16024040
    42272 1pp9:P (2.1) BS01 JZR 1.10.2.2 GO:0005743 ... P00157 16024040
    42273 1pp9:P (2.1) BS02 AZI 1.10.2.2 GO:0005743 ... P00157 16024040
    42274 1pp9:P (2.1) BS03 HEM 1.10.2.2 GO:0005743 ... P00157 16024040
    42275 1pp9:P (2.1) BS04 HEM 1.10.2.2 GO:0005743 ... P00157 16024040
    42276 1pp9:P (2.1) BS05 SMA 1.10.2.2 GO:0005743 ... P00157 16024040
    42277 1pp9:P (2.1) BS06 UQ 1.10.2.2 GO:0005743 ... P00157 16024040
    42278 1pp9:Q (2.1) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 16024040
    42279 1pp9:R (2.1) BS01 SMA 7.1.1.8 GO:0008121 ... P13272 16024040
    42280 1pp9:R (2.1) BS02 FES 7.1.1.8 GO:0008121 ... P13272 16024040
    42281 1pp9:S (2.1) BS01 JZR 1.10.2.2 GO:0005743 ... P00129 16024040
    42282 1ppa:A (2.0) BS01 ANL 3.1.1.4 GO:0004623 ... P04361 2120215
    42283 1ppb:H (1.92) BS01 0G6 3.4.21.5 GO:0004252 ... P00734 2583108
    42284 1ppc:E (1.8) BS01 MID 3.4.21.4 GO:0004175 ... P00760 2226434 MOAD: Ki=0.69uM
    BindingDB: Ki=325nM
    42285 1ppc:E (1.8) BS02 CA 3.4.21.4 GO:0004175 ... P00760 2226434
    42286 1ppe:E (2.0) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 2914611
    42287 1ppf:E (1.8) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 3640709
    42288 1ppg:E (2.3) BS01 peptide 3.4.21.37 GO:0000122 ... P08246 3391280
    42289 1ppg:E (2.3) BS02 FUC 3.4.21.37 GO:0000122 ... P08246 3391280
    42290 1ppg:E (2.3) BS03 FUC 3.4.21.37 GO:0000122 ... P08246 3391280
    42291 1pph:E (1.9) BS01 CA 3.4.21.4 GO:0004175 ... P00760 1879520
    42292 1pph:E (1.9) BS02 0ZG 3.4.21.4 GO:0004175 ... P00760 1879520 MOAD: Ki=1.2uM
    BindingDB: Ki=99999999999999nM
    42293 1ppi:A (2.2) BS01 GLC 3.2.1.1 GO:0003824 ... P00690 8193143
    42294 1ppi:A (2.2) BS02 GLC 3.2.1.1 GO:0003824 ... P00690 8193143
    42295 1ppi:A (2.2) BS03 BGC 3.2.1.1 GO:0003824 ... P00690 8193143
    42296 1ppi:A (2.2) BS04 DAF 3.2.1.1 GO:0003824 ... P00690 8193143
    42297 1ppi:A (2.2) BS05 CL 3.2.1.1 GO:0003824 ... P00690 8193143
    42298 1ppi:A (2.2) BS06 CA 3.2.1.1 GO:0003824 ... P00690 8193143
    42299 1ppj:A (2.1) BS01 JZR 1.10.2.2 GO:0005739 ... P31800 16024040
    42300 1ppj:A (2.1) BS02 AZI 1.10.2.2 GO:0005739 ... P31800 16024040
    42301 1ppj:B (2.1) BS01 JZR 1.10.2.2 GO:0004222 ... P23004 16024040
    42302 1ppj:C (2.1) BS01 JZR 1.10.2.2 GO:0005743 ... P00157 16024040
    42303 1ppj:C (2.1) BS02 HEM 1.10.2.2 GO:0005743 ... P00157 16024040
    42304 1ppj:C (2.1) BS03 HEM 1.10.2.2 GO:0005743 ... P00157 16024040
    42305 1ppj:C (2.1) BS04 SMA 1.10.2.2 GO:0005743 ... P00157 16024040
    42306 1ppj:C (2.1) BS05 ANY 1.10.2.2 GO:0005743 ... P00157 16024040
    42307 1ppj:D (2.1) BS01 JZR 7.1.1.8 GO:0009055 ... P00125 16024040
    42308 1ppj:D (2.1) BS02 HEC 7.1.1.8 GO:0009055 ... P00125 16024040
    42309 1ppj:E (2.1) BS01 FES 7.1.1.8 GO:0008121 ... P13272 16024040
    42310 1ppj:E (2.1) BS02 SMA 7.1.1.8 GO:0008121 ... P13272 16024040
    42311 1ppj:F (2.1) BS01 JZR 1.10.2.2 GO:0005743 ... P00129 16024040
    42312 1ppj:G (2.1) BS01 AZI 1.10.2.2 GO:0005739 ... P13271 16024040
    42313 1ppj:O (2.1) BS01 JZR 1.10.2.2 GO:0004222 ... P23004 16024040
    42314 1ppj:P (2.1) BS01 HEM 1.10.2.2 GO:0005743 ... P00157 16024040
    42315 1ppj:P (2.1) BS02 HEM 1.10.2.2 GO:0005743 ... P00157 16024040
    42316 1ppj:P (2.1) BS03 SMA 1.10.2.2 GO:0005743 ... P00157 16024040
    42317 1ppj:P (2.1) BS04 ANY 1.10.2.2 GO:0005743 ... P00157 16024040
    42318 1ppj:Q (2.1) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 16024040
    42319 1ppj:R (2.1) BS01 SMA 7.1.1.8 GO:0008121 ... P13272 16024040
    42320 1ppj:R (2.1) BS02 FES 7.1.1.8 GO:0008121 ... P13272 16024040
    42321 1ppj:S (2.1) BS01 JZR 1.10.2.2 GO:0005743 ... P00129 16024040
    42322 1ppk:E (1.8) BS01 IVV 3.4.23.20 GO:0004190 ... P00798 1606144 MOAD: Ki=22nM
    42323 1ppl:E (1.7) BS01 1Z7 3.4.23.20 GO:0004190 ... P00798 1606144 MOAD: Ki=2.8nM
    42324 1ppm:E (1.7) BS01 0P1 3.4.23.20 GO:0004190 ... P00798 1606144 MOAD: Ki=1600nM
    42325 1ppp:A (1.9) BS01 E6C 3.4.22.2 GO:0006508 ... P00784 1445241
    42326 1ppr:M (2.0) BS01 CLA ? GO:0016168 ... P80484 8650577
    42327 1ppr:M (2.0) BS02 CLA ? GO:0016168 ... P80484 8650577
    42328 1ppr:M (2.0) BS03 PID ? GO:0016168 ... P80484 8650577
    42329 1ppr:M (2.0) BS04 PID ? GO:0016168 ... P80484 8650577
    42330 1ppr:M (2.0) BS05 PID ? GO:0016168 ... P80484 8650577
    42331 1ppr:M (2.0) BS06 PID ? GO:0016168 ... P80484 8650577
    42332 1ppr:M (2.0) BS07 PID ? GO:0016168 ... P80484 8650577
    42333 1ppr:M (2.0) BS08 PID ? GO:0016168 ... P80484 8650577
    42334 1ppr:M (2.0) BS09 PID ? GO:0016168 ... P80484 8650577
    42335 1ppr:M (2.0) BS10 PID ? GO:0016168 ... P80484 8650577
    42336 1ppr:N (2.0) BS01 CLA ? GO:0016168 ... P80484 8650577
    42337 1ppr:N (2.0) BS02 CLA ? GO:0016168 ... P80484 8650577
    42338 1ppr:N (2.0) BS03 PID ? GO:0016168 ... P80484 8650577
    42339 1ppr:N (2.0) BS04 PID ? GO:0016168 ... P80484 8650577
    42340 1ppr:N (2.0) BS05 PID ? GO:0016168 ... P80484 8650577
    42341 1ppr:N (2.0) BS06 PID ? GO:0016168 ... P80484 8650577
    42342 1ppr:N (2.0) BS07 PID ? GO:0016168 ... P80484 8650577
    42343 1ppr:N (2.0) BS08 PID ? GO:0016168 ... P80484 8650577
    42344 1ppr:N (2.0) BS09 PID ? GO:0016168 ... P80484 8650577
    42345 1ppr:N (2.0) BS10 PID ? GO:0016168 ... P80484 8650577
    42346 1ppr:O (2.0) BS01 CLA ? GO:0016168 ... P80484 8650577
    42347 1ppr:O (2.0) BS02 CLA ? GO:0016168 ... P80484 8650577
    42348 1ppr:O (2.0) BS03 PID ? GO:0016168 ... P80484 8650577
    42349 1ppr:O (2.0) BS04 PID ? GO:0016168 ... P80484 8650577
    42350 1ppr:O (2.0) BS05 PID ? GO:0016168 ... P80484 8650577
    42351 1ppr:O (2.0) BS06 PID ? GO:0016168 ... P80484 8650577
    42352 1ppr:O (2.0) BS07 PID ? GO:0016168 ... P80484 8650577
    42353 1ppr:O (2.0) BS08 PID ? GO:0016168 ... P80484 8650577
    42354 1ppr:O (2.0) BS09 PID ? GO:0016168 ... P80484 8650577
    42355 1ppr:O (2.0) BS10 PID ? GO:0016168 ... P80484 8650577
    42356 1ppv:A (1.7) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 15643873
    42357 1ppv:A (1.7) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 15643873
    42358 1ppv:A (1.7) BS03 BHI 5.3.3.2 GO:0000287 ... Q46822 15643873
    42359 1ppv:B (1.7) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 15643873
    42360 1ppv:B (1.7) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 15643873
    42361 1ppv:B (1.7) BS03 BHI 5.3.3.2 GO:0000287 ... Q46822 15643873
    42362 1ppw:A (2.21) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 15643873
    42363 1ppw:A (2.21) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 15643873
    42364 1ppw:A (2.21) BS03 EIP 5.3.3.2 GO:0000287 ... Q46822 15643873 MOAD: ic50~50uM
    42365 1ppw:B (2.21) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 15643873
    42366 1ppw:B (2.21) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 15643873
    42367 1ppw:B (2.21) BS03 EIP 5.3.3.2 GO:0000287 ... Q46822 15643873 MOAD: ic50~50uM
    42368 1ppx:A (-1.00) BS01 MG 3.6.1.55 GO:0000287 ... P08337 12939141
    42369 1pq2:A (2.7) BS01 HEM 1.14.14.1 GO:0002933 ... P10632 14676196
    42370 1pq2:A (2.7) BS02 PLM 1.14.14.1 GO:0002933 ... P10632 14676196
    42371 1pq2:B (2.7) BS01 PLM 1.14.14.1 GO:0002933 ... P10632 14676196
    42372 1pq2:B (2.7) BS02 HEM 1.14.14.1 GO:0002933 ... P10632 14676196
    42373 1pq3:A (2.7) BS01 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42374 1pq3:A (2.7) BS02 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42375 1pq3:A (2.7) BS03 S2C 3.5.3.1 GO:0004053 ... P78540 12859189
    42376 1pq3:B (2.7) BS01 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42377 1pq3:B (2.7) BS02 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42378 1pq3:B (2.7) BS03 S2C 3.5.3.1 GO:0004053 ... P78540 12859189
    42379 1pq3:C (2.7) BS01 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42380 1pq3:C (2.7) BS02 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42381 1pq3:C (2.7) BS03 S2C 3.5.3.1 GO:0004053 ... P78540 12859189
    42382 1pq3:D (2.7) BS01 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42383 1pq3:D (2.7) BS02 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42384 1pq3:D (2.7) BS03 S2C 3.5.3.1 GO:0004053 ... P78540 12859189
    42385 1pq3:E (2.7) BS01 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42386 1pq3:E (2.7) BS02 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42387 1pq3:E (2.7) BS03 S2C 3.5.3.1 GO:0004053 ... P78540 12859189
    42388 1pq3:F (2.7) BS01 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42389 1pq3:F (2.7) BS02 MN 3.5.3.1 GO:0004053 ... P78540 12859189
    42390 1pq3:F (2.7) BS03 S2C 3.5.3.1 GO:0004053 ... P78540 12859189
    42391 1pq4:A (1.9) BS01 ZN ? GO:0030001 ... P73085 14583199
    42392 1pq4:B (1.9) BS01 ZN ? GO:0030001 ... P73085 14583199
    42393 1pq5:A (0.85) BS01 ARG 3.4.21.4 GO:0004252 ... P35049 12937176
    42394 1pq6:A (2.4) BS01 965 ? GO:0003677 ... P55055 12819202 BindingDB: EC50=40.0nM, IC50=23nM, Ki=2.2nM
    42395 1pq6:B (2.4) BS01 965 ? GO:0003677 ... P55055 12819202 BindingDB: EC50=40.0nM, IC50=23nM, Ki=2.2nM
    42396 1pq6:D (2.4) BS01 965 ? GO:0003677 ... P55055 12819202 BindingDB: EC50=40.0nM, IC50=23nM, Ki=2.2nM
    42397 1pq7:A (0.8) BS01 ARG 3.4.21.4 GO:0004252 ... P35049 12937176
    42398 1pq8:A (1.0) BS01 peptide 3.4.21.4 GO:0004252 ... P35049 12937176
    42399 1pq8:A (1.0) BS02 LYS 3.4.21.4 GO:0004252 ... P35049 12937176
    42400 1pq9:A (2.1) BS01 BNS ? GO:0003677 ... P55055 12819202

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).