SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    43601 1qki:G (3.0) BS01 NAP 1.1.1.49 GO:0004345 ... P11413 10745013
    43602 1qki:H (3.0) BS01 NAP 1.1.1.49 GO:0004345 ... P11413 10745013
    43603 1qki:H (3.0) BS02 GOA 1.1.1.49 GO:0004345 ... P11413 10745013
    43604 1qkj:A (2.3) BS01 UDP 2.4.1.27 GO:0006304 ... P04547 10497034
    43605 1qkm:A (1.8) BS01 GEN ? GO:0003677 ... Q92731 10469641 BindingDB: IC50=10nM, EC50=28nM, Ki=24nM
    43606 1qkn:A (2.25) BS01 RAL ? N/A Q62986 10469641
    43607 1qko:A (2.1) BS01 RET ? GO:0005216 ... P02945 10548112
    43608 1qkp:A (2.1) BS01 RET ? GO:0005216 ... P02945 10548112
    43609 1qkq:A (1.8) BS01 MAN 3.1.1.5 GO:0002667 ... Q05315 10529229
    43610 1qks:A (1.28) BS01 HEC 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 7736589
    43611 1qks:A (1.28) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 7736589
    43612 1qks:B (1.28) BS01 HEC 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 7736589
    43613 1qks:B (1.28) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 7736589
    43614 1qkt:A (2.2) BS01 EST ? N/A P03372 11278577 MOAD: Kd=0.92nM
    BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    43615 1qku:A (3.2) BS01 EST ? N/A P03372 11278577 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    43616 1qku:B (3.2) BS01 EST ? N/A P03372 11278577 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    43617 1qku:C (3.2) BS01 EST ? N/A P03372 11278577 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    43618 1qkz:H (1.95) BS01 peptide N/A N/A N/A 10512717
    43619 1qkz:L (1.95) BS01 peptide N/A N/A N/A 10512717
    43620 1ql3:A (1.4) BS01 HEC ? GO:0009055 ... P54820 10623555
    43621 1ql3:B (1.4) BS01 HEC ? GO:0009055 ... P54820 10623555
    43622 1ql3:C (1.4) BS01 HEC ? GO:0009055 ... P54820 10623555
    43623 1ql3:D (1.4) BS01 HEC ? GO:0009055 ... P54820 10623555
    43624 1ql4:A (1.5) BS01 HEC ? GO:0009055 ... P54820 10623555
    43625 1ql4:B (1.5) BS01 HEC ? GO:0009055 ... P54820 10623555
    43626 1ql4:C (1.5) BS01 HEC ? GO:0009055 ... P54820 10623555
    43627 1ql4:D (1.5) BS01 HEC ? GO:0009055 ... P54820 10623555
    43628 1ql6:A (2.4) BS01 ATP 2.7.11.1
    2.7.11.19
    2.7.11.26
    GO:0004672 ... P00518 10545198
    43629 1ql6:A (2.4) BS02 MN 2.7.11.1
    2.7.11.19
    2.7.11.26
    GO:0004672 ... P00518 10545198
    43630 1ql7:A (2.1) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11921406
    43631 1ql7:A (2.1) BS02 ZEN 3.4.21.4 GO:0004175 ... P00760 11921406 MOAD: Kd=15uM
    43632 1ql8:A (3.0) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11921406
    43633 1ql8:A (3.0) BS02 ZEN 3.4.21.4 GO:0004175 ... P00760 11921406
    43634 1ql9:A (2.3) BS01 CA 3.4.21.4 GO:0004252 ... P00763 12527302
    43635 1ql9:A (2.3) BS02 ZEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=4.45uM
    43636 1qlb:A (2.33) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 10586875
    43637 1qlb:A (2.33) BS02 FUM 1.3.5.1 GO:0000104 ... P17412 10586875
    43638 1qlb:A (2.33) BS03 CA 1.3.5.1 GO:0000104 ... P17412 10586875
    43639 1qlb:B (2.33) BS01 FES 1.3.5.1 GO:0005886 ... P17596 10586875
    43640 1qlb:B (2.33) BS02 F3S 1.3.5.1 GO:0005886 ... P17596 10586875
    43641 1qlb:B (2.33) BS03 SF4 1.3.5.1 GO:0005886 ... P17596 10586875
    43642 1qlb:C (2.33) BS01 HEM ? GO:0005886 ... P17413 10586875
    43643 1qlb:C (2.33) BS02 HEM ? GO:0005886 ... P17413 10586875
    43644 1qlb:D (2.33) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 10586875
    43645 1qlb:D (2.33) BS02 FUM 1.3.5.1 GO:0000104 ... P17412 10586875
    43646 1qlb:D (2.33) BS03 CA 1.3.5.1 GO:0000104 ... P17412 10586875
    43647 1qlb:E (2.33) BS01 FES 1.3.5.1 GO:0005886 ... P17596 10586875
    43648 1qlb:E (2.33) BS02 F3S 1.3.5.1 GO:0005886 ... P17596 10586875
    43649 1qlb:E (2.33) BS03 SF4 1.3.5.1 GO:0005886 ... P17596 10586875
    43650 1qlb:F (2.33) BS01 HEM ? GO:0005886 ... P17413 10586875
    43651 1qlb:F (2.33) BS02 HEM ? GO:0005886 ... P17413 10586875
    43652 1qle:A (3.0) BS01 HEA 7.1.1.9 GO:0004129 ... P98002 10559205
    43653 1qle:A (3.0) BS02 HEA 7.1.1.9 GO:0004129 ... P98002 10559205
    43654 1qle:A (3.0) BS03 CU 7.1.1.9 GO:0004129 ... P98002 10559205
    43655 1qle:A (3.0) BS04 CA 7.1.1.9 GO:0004129 ... P98002 10559205
    43656 1qle:A (3.0) BS05 MN 7.1.1.9 GO:0004129 ... P98002 10559205
    43657 1qle:B (3.0) BS01 HEA 7.1.1.9 GO:0004129 ... P08306 10559205
    43658 1qle:B (3.0) BS02 CUA 7.1.1.9 GO:0004129 ... P08306 10559205
    43659 1qlf:A (2.65) BS01 peptide ? N/A P01899 10023771
    43660 1qlg:A (2.2) BS01 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    43661 1qlg:A (2.2) BS02 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    43662 1qlg:A (2.2) BS03 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    43663 1qlg:A (2.2) BS04 MG 3.1.3.8 GO:0005576 ... O66037 10655618
    43664 1qlg:A (2.2) BS05 MG 3.1.3.8 GO:0005576 ... O66037 10655618
    43665 1qlh:A (2.07) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 10529241
    43666 1qlh:A (2.07) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 10529241
    43667 1qlh:A (2.07) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 10529241
    43668 1qli:A (-1.00) BS01 ZN ? N/A Q05158 9115265
    43669 1qli:A (-1.00) BS02 ZN ? N/A Q05158 9115265
    43670 1qlj:A (2.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 10529241
    43671 1qlj:A (2.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 10529241
    43672 1qlk:A (-1.00) BS01 CA ? GO:0001726 ... P04631 9485423
    43673 1qlk:A (-1.00) BS02 CA ? GO:0001726 ... P04631 9485423
    43674 1qlk:B (-1.00) BS01 CA ? GO:0001726 ... P04631 9485423
    43675 1qlk:B (-1.00) BS02 CA ? GO:0001726 ... P04631 9485423
    43676 1qll:A (2.04) BS01 TDA 3.1.1.4 GO:0004623 ... P82287 11141053
    43677 1qll:B (2.04) BS01 TDA 3.1.1.4 GO:0004623 ... P82287 11141053
    43678 1qlm:A (2.0) BS01 PO4 3.5.4.27 GO:0005737 ... P94954 10545331
    43679 1qlm:A (2.0) BS02 PO4 3.5.4.27 GO:0005737 ... P94954 10545331
    43680 1qlm:A (2.0) BS03 PO4 3.5.4.27 GO:0005737 ... P94954 10545331
    43681 1qln:A (2.4) BS01 dna 2.7.7.6 GO:0000428 ... P00573 10600732
    43682 1qln:A (2.4) BS02 rna 2.7.7.6 GO:0000428 ... P00573 10600732
    43683 1qln:A (2.4) BS03 dna 2.7.7.6 GO:0000428 ... P00573 10600732
    43684 1qlq:A (1.42) BS01 SO4 ? GO:0004867 ... P00974 10653700
    43685 1qlr:B (2.83) BS01 FUC N/A N/A N/A 11086081
    43686 1qlr:D (2.83) BS01 FUC N/A N/A N/A 11086081
    43687 1qls:A (2.3) BS01 peptide ? GO:0005509 ... P31950 10673436
    43688 1qls:A (2.3) BS02 CA ? GO:0005509 ... P31950 10673436
    43689 1qls:A (2.3) BS03 CA ? GO:0005509 ... P31950 10673436
    43690 1qlt:A (2.2) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=4.6mM
    43691 1qlt:B (2.2) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=4.6mM
    43692 1qlu:A (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10585424
    43693 1qlu:A (2.4) BS02 EUG 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=22uM
    43694 1qlu:B (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10585424
    43695 1qlu:B (2.4) BS02 EUG 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=22uM
    43696 1qm5:A (2.0) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    43697 1qm5:A (2.0) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    43698 1qm5:A (2.0) BS03 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    43699 1qm5:A (2.0) BS04 SGC 2.4.1.1 GO:0004645 ... P00490 10469642
    43700 1qm5:A (2.0) BS05 PO4 2.4.1.1 GO:0004645 ... P00490 10469642
    43701 1qm5:A (2.0) BS06 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    43702 1qm5:A (2.0) BS07 PLP 2.4.1.1 GO:0004645 ... P00490 10469642
    43703 1qm5:B (2.0) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    43704 1qm5:B (2.0) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    43705 1qm5:B (2.0) BS03 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    43706 1qm5:B (2.0) BS04 SGC 2.4.1.1 GO:0004645 ... P00490 10469642
    43707 1qm5:B (2.0) BS05 PO4 2.4.1.1 GO:0004645 ... P00490 10469642
    43708 1qm5:B (2.0) BS06 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    43709 1qm5:B (2.0) BS07 PLP 2.4.1.1 GO:0004645 ... P00490 10469642
    43710 1qm6:A (2.5) BS01 ZN 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43711 1qm6:A (2.5) BS02 ZN 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43712 1qm6:B (2.5) BS01 ZN 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43713 1qm6:B (2.5) BS02 ZN 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43714 1qm8:A (2.5) BS01 RET ? GO:0005216 ... P02945 9769218
    43715 1qmd:A (2.2) BS01 ZN 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43716 1qmd:A (2.2) BS02 ZN 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43717 1qmd:A (2.2) BS03 CA 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43718 1qmd:A (2.2) BS04 CA 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43719 1qmd:A (2.2) BS05 CA 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43720 1qmd:B (2.2) BS01 ZN 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43721 1qmd:B (2.2) BS02 ZN 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43722 1qmd:B (2.2) BS03 CA 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43723 1qmd:B (2.2) BS04 CA 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43724 1qmd:B (2.2) BS05 CA 3.1.4.3 GO:0004629 ... Q0TV31 10610794
    43725 1qmf:A (2.8) BS01 CES ? GO:0005886 ... P14677 10860753
    43726 1qmf:A (2.8) BS02 KEF ? GO:0005886 ... P14677 10860753
    43727 1qmg:A (1.6) BS01 APX 1.1.1.86 GO:0004455 ... Q01292 10739911
    43728 1qmg:A (1.6) BS02 MN 1.1.1.86 GO:0004455 ... Q01292 10739911
    43729 1qmg:A (1.6) BS03 DMV 1.1.1.86 GO:0004455 ... Q01292 10739911
    43730 1qmg:B (1.6) BS01 APX 1.1.1.86 GO:0004455 ... Q01292 10739911
    43731 1qmg:B (1.6) BS02 MN 1.1.1.86 GO:0004455 ... Q01292 10739911
    43732 1qmg:B (1.6) BS03 DMV 1.1.1.86 GO:0004455 ... Q01292 10739911
    43733 1qmg:C (1.6) BS01 APX 1.1.1.86 GO:0004455 ... Q01292 10739911
    43734 1qmg:C (1.6) BS02 MN 1.1.1.86 GO:0004455 ... Q01292 10739911
    43735 1qmg:C (1.6) BS03 DMV 1.1.1.86 GO:0004455 ... Q01292 10739911
    43736 1qmg:D (1.6) BS01 APX 1.1.1.86 GO:0004455 ... Q01292 10739911
    43737 1qmg:D (1.6) BS02 MN 1.1.1.86 GO:0004455 ... Q01292 10739911
    43738 1qmg:D (1.6) BS03 DMV 1.1.1.86 GO:0004455 ... Q01292 10739911
    43739 1qmh:B (2.1) BS01 DTO 6.5.1.4 GO:0003824 ... P46849 10673421
    43740 1qml:A (3.0) BS01 HG 4.2.1.24 GO:0004655 ... P05373 10739915
    43741 1qmo:A (3.5) BS01 MAN ? GO:0030246 ... Q9ZTA9 10843844
    43742 1qmo:B (3.5) BS01 MAN ? GO:0030246 ... Q9ZTA9 10843844
    43743 1qmo:C (3.5) BS01 MAN ? GO:0030246 ... Q9ZTA9 10843844
    43744 1qmo:D (3.5) BS01 MAN ? GO:0030246 ... Q9ZTA9 10843844
    43745 1qmo:E (3.5) BS01 CA ? GO:0030246 ... Q9ZTA9 10843844
    43746 1qmo:E (3.5) BS02 MN ? GO:0030246 ... Q9ZTA9 10843844
    43747 1qmo:E (3.5) BS03 MAN ? GO:0030246 ... Q9ZTA9 10843844
    43748 1qmo:F (3.5) BS01 CA ? GO:0030246 ... Q9ZTA9 10843844
    43749 1qmo:F (3.5) BS02 MN ? GO:0030246 ... Q9ZTA9 10843844
    43750 1qmo:F (3.5) BS03 MAN ? GO:0030246 ... Q9ZTA9 10843844
    43751 1qmo:G (3.5) BS01 CA ? GO:0030246 ... Q9ZTA9 10843844
    43752 1qmo:G (3.5) BS02 MN ? GO:0030246 ... Q9ZTA9 10843844
    43753 1qmo:G (3.5) BS03 MAN ? GO:0030246 ... Q9ZTA9 10843844
    43754 1qmo:H (3.5) BS01 CA ? GO:0030246 ... Q9ZTA9 10843844
    43755 1qmo:H (3.5) BS02 MN ? GO:0030246 ... Q9ZTA9 10843844
    43756 1qmo:H (3.5) BS03 MAN ? GO:0030246 ... Q9ZTA9 10843844
    43757 1qmp:A (2.0) BS01 CA ? GO:0000160 ... P52934 10556024
    43758 1qmp:B (2.0) BS01 CA ? GO:0000160 ... P52934 10556024
    43759 1qmp:C (2.0) BS01 CA ? GO:0000160 ... P52934 10556024
    43760 1qmp:D (2.0) BS01 CA ? GO:0000160 ... P52934 10556024
    43761 1qmq:A (1.55) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 10557259
    43762 1qmq:A (1.55) BS02 DRB 1.14.15.1 GO:0004497 ... P00183 10557259
    43763 1qmq:A (1.55) BS03 DRB 1.14.15.1 GO:0004497 ... P00183 10557259
    43764 1qmu:A (2.7) BS01 ZN 3.4.17.22 GO:0004180 ... P83852 10545093
    43765 1qmz:A (2.2) BS01 peptide 2.7.11.22 GO:0000082 ... P24941 10559988
    43766 1qmz:A (2.2) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 10559988
    43767 1qmz:A (2.2) BS03 MG 2.7.11.22 GO:0000082 ... P24941 10559988
    43768 1qmz:C (2.2) BS01 peptide 2.7.11.22 GO:0000082 ... P24941 10559988
    43769 1qmz:C (2.2) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 10559988
    43770 1qmz:C (2.2) BS03 MG 2.7.11.22 GO:0000082 ... P24941 10559988
    43771 1qn0:A (-1.00) BS01 HEC ? GO:0009055 ... P00133 10756105
    43772 1qn0:A (-1.00) BS02 HEC ? GO:0009055 ... P00133 10756105
    43773 1qn0:A (-1.00) BS03 HEC ? GO:0009055 ... P00133 10756105
    43774 1qn0:A (-1.00) BS04 HEC ? GO:0009055 ... P00133 10756105
    43775 1qn1:A (-1.00) BS01 HEC ? GO:0009055 ... P00133 10756105
    43776 1qn1:A (-1.00) BS02 HEC ? GO:0009055 ... P00133 10756105
    43777 1qn1:A (-1.00) BS03 HEC ? GO:0009055 ... P00133 10756105
    43778 1qn1:A (-1.00) BS04 HEC ? GO:0009055 ... P00133 10756105
    43779 1qn2:A (2.01) BS01 HEC ? GO:0009055 ... Q7SIA4 10386873
    43780 1qn2:B (2.01) BS01 HEC ? GO:0009055 ... Q7SIA4 10386873
    43781 1qn2:C (2.01) BS01 HEC ? GO:0009055 ... Q7SIA4 10386873
    43782 1qn3:A (1.95) BS01 dna ? GO:0003677 ... P28147 10617571
    43783 1qn3:A (1.95) BS02 dna ? GO:0003677 ... P28147 10617571
    43784 1qn3:B (1.95) BS01 dna ? GO:0003677 ... P28147 10617571
    43785 1qn3:B (1.95) BS02 dna ? GO:0003677 ... P28147 10617571
    43786 1qn4:A (1.86) BS01 dna ? GO:0003677 ... P28147 10617571
    43787 1qn4:A (1.86) BS02 dna ? GO:0003677 ... P28147 10617571
    43788 1qn4:B (1.86) BS01 dna ? GO:0003677 ... P28147 10617571
    43789 1qn4:B (1.86) BS02 dna ? GO:0003677 ... P28147 10617571
    43790 1qn5:A (1.93) BS01 dna ? GO:0003677 ... P28147 10617571
    43791 1qn5:A (1.93) BS02 dna ? GO:0003677 ... P28147 10617571
    43792 1qn5:B (1.93) BS01 dna ? GO:0003677 ... P28147 10617571
    43793 1qn5:B (1.93) BS02 dna ? GO:0003677 ... P28147 10617571
    43794 1qn6:A (2.1) BS01 dna ? GO:0003677 ... P28147 10617571
    43795 1qn6:A (2.1) BS02 dna ? GO:0003677 ... P28147 10617571
    43796 1qn6:B (2.1) BS01 dna ? GO:0003677 ... P28147 10617571
    43797 1qn6:B (2.1) BS02 dna ? GO:0003677 ... P28147 10617571
    43798 1qn7:A (2.3) BS01 dna ? GO:0003677 ... P28147 10617571
    43799 1qn7:A (2.3) BS02 dna ? GO:0003677 ... P28147 10617571
    43800 1qn7:B (2.3) BS01 dna ? GO:0003677 ... P28147 10617571

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).