SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2207 2208 2209 2210 2211 2212 2213 2214 2215 2216 2217 2218 2219 2220 2221 2222 2223 2224 2225 2226 2227 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    443201 6b0j:C (2.5) BS03 G4S N/A N/A N/A 29681469
    443202 6b0j:C (2.5) BS04 CA N/A N/A N/A 29681469
    443203 6b0j:C (2.5) BS05 9RN N/A N/A N/A 29681469
    443204 6b0j:C (2.5) BS06 ARG N/A N/A N/A 29681469
    443205 6b0k:A (2.15) BS01 CA N/A N/A N/A 29681469
    443206 6b0k:A (2.15) BS02 9RN N/A N/A N/A 29681469
    443207 6b0k:A (2.15) BS03 G4S N/A N/A N/A 29681469
    443208 6b0k:A (2.15) BS04 9RN N/A N/A N/A 29681469
    443209 6b0k:A (2.15) BS05 G4S N/A N/A N/A 29681469
    443210 6b0k:A (2.15) BS06 ARG N/A N/A N/A 29681469
    443211 6b0k:B (2.15) BS01 CA N/A N/A N/A 29681469
    443212 6b0k:B (2.15) BS02 9RN N/A N/A N/A 29681469
    443213 6b0k:B (2.15) BS03 G4S N/A N/A N/A 29681469
    443214 6b0k:B (2.15) BS04 9RN N/A N/A N/A 29681469
    443215 6b0k:B (2.15) BS05 G4S N/A N/A N/A 29681469
    443216 6b0k:C (2.15) BS01 CA N/A N/A N/A 29681469
    443217 6b0k:C (2.15) BS02 9RN N/A N/A N/A 29681469
    443218 6b0k:C (2.15) BS03 G4S N/A N/A N/A 29681469
    443219 6b0k:C (2.15) BS04 9RN N/A N/A N/A 29681469
    443220 6b0k:C (2.15) BS05 G4S N/A N/A N/A 29681469
    443221 6b0l:A (3.98) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 29695795
    443222 6b0l:B (3.98) BS01 GDP ? GO:0000226 ... P02554 29695795
    443223 6b0l:B (3.98) BS02 TA1 ? GO:0000226 ... P02554 29695795 BindingDB: EC50=520nM
    443224 6b0l:K (3.98) BS01 ANP ? GO:0003777 ... Q960Z0 29695795
    443225 6b0n:L (3.4) BS01 MAN N/A N/A N/A 29769533
    443226 6b0o:A (1.552) BS01 dna ? N/A P19544 29294058
    443227 6b0o:A (1.552) BS02 dna ? N/A P19544 29294058
    443228 6b0o:A (1.552) BS03 ZN ? N/A P19544 29294058
    443229 6b0o:A (1.552) BS04 ZN ? N/A P19544 29294058
    443230 6b0o:A (1.552) BS05 ZN ? N/A P19544 29294058
    443231 6b0o:A (1.552) BS06 ZN ? N/A P19544 29294058
    443232 6b0o:D (1.552) BS01 dna ? N/A P19544 29294058
    443233 6b0o:D (1.552) BS02 dna ? N/A P19544 29294058
    443234 6b0o:D (1.552) BS03 ZN ? N/A P19544 29294058
    443235 6b0o:D (1.552) BS04 ZN ? N/A P19544 29294058
    443236 6b0o:D (1.552) BS05 ZN ? N/A P19544 29294058
    443237 6b0o:D (1.552) BS06 ZN ? N/A P19544 29294058
    443238 6b0p:A (2.077) BS01 dna ? N/A P19544 29294058
    443239 6b0p:A (2.077) BS02 dna ? N/A P19544 29294058
    443240 6b0p:A (2.077) BS03 ZN ? N/A P19544 29294058
    443241 6b0p:A (2.077) BS04 ZN ? N/A P19544 29294058
    443242 6b0p:A (2.077) BS05 ZN ? N/A P19544 29294058
    443243 6b0p:A (2.077) BS06 ZN ? N/A P19544 29294058
    443244 6b0p:D (2.077) BS01 dna ? N/A P19544 29294058
    443245 6b0p:D (2.077) BS02 dna ? N/A P19544 29294058
    443246 6b0p:D (2.077) BS03 ZN ? N/A P19544 29294058
    443247 6b0p:D (2.077) BS04 ZN ? N/A P19544 29294058
    443248 6b0p:D (2.077) BS05 ZN ? N/A P19544 29294058
    443249 6b0p:D (2.077) BS06 ZN ? N/A P19544 29294058
    443250 6b0q:A (2.794) BS01 dna ? N/A P19544 29294058
    443251 6b0q:A (2.794) BS02 dna ? N/A P19544 29294058
    443252 6b0q:A (2.794) BS03 ZN ? N/A P19544 29294058
    443253 6b0q:A (2.794) BS04 ZN ? N/A P19544 29294058
    443254 6b0q:A (2.794) BS05 ZN ? N/A P19544 29294058
    443255 6b0q:A (2.794) BS06 ZN ? N/A P19544 29294058
    443256 6b0q:D (2.794) BS01 dna ? N/A P19544 29294058
    443257 6b0q:D (2.794) BS02 dna ? N/A P19544 29294058
    443258 6b0q:D (2.794) BS03 ZN ? N/A P19544 29294058
    443259 6b0q:D (2.794) BS04 ZN ? N/A P19544 29294058
    443260 6b0q:D (2.794) BS05 ZN ? N/A P19544 29294058
    443261 6b0q:D (2.794) BS06 ZN ? N/A P19544 29294058
    443262 6b0r:A (1.818) BS01 dna ? N/A P19544 29294058
    443263 6b0r:A (1.818) BS02 dna ? N/A P19544 29294058
    443264 6b0r:A (1.818) BS03 ZN ? N/A P19544 29294058
    443265 6b0r:A (1.818) BS04 ZN ? N/A P19544 29294058
    443266 6b0r:A (1.818) BS05 ZN ? N/A P19544 29294058
    443267 6b0r:A (1.818) BS06 ZN ? N/A P19544 29294058
    443268 6b0r:D (1.818) BS01 dna ? N/A P19544 29294058
    443269 6b0r:D (1.818) BS02 dna ? N/A P19544 29294058
    443270 6b0r:D (1.818) BS03 ZN ? N/A P19544 29294058
    443271 6b0r:D (1.818) BS04 ZN ? N/A P19544 29294058
    443272 6b0r:D (1.818) BS05 ZN ? N/A P19544 29294058
    443273 6b0r:D (1.818) BS06 ZN ? N/A P19544 29294058
    443274 6b0t:A (2.8) BS01 C7V ? GO:0001725 ... Q16658 29573988
    443275 6b0t:B (2.8) BS01 C7V ? GO:0001725 ... Q16658 29573988
    443276 6b0t:C (2.8) BS01 C7V ? GO:0001725 ... Q16658 29573988
    443277 6b0t:D (2.8) BS01 C7V ? GO:0001725 ... Q16658 29573988
    443278 6b0t:E (2.8) BS01 C7V ? GO:0001725 ... Q16658 29573988
    443279 6b0t:F (2.8) BS01 C7V ? GO:0001725 ... Q16658 29573988
    443280 6b0u:A (2.8) BS01 peptide 2.3.1.- GO:0005576 ... P9WFK7 29345920
    443281 6b0u:A (2.8) BS02 COA 2.3.1.- GO:0005576 ... P9WFK7 29345920
    443282 6b0u:A (2.8) BS03 COA 2.3.1.- GO:0005576 ... P9WFK7 29345920
    443283 6b0u:B (2.8) BS01 peptide 2.3.1.- GO:0005576 ... P9WFK7 29345920
    443284 6b0u:B (2.8) BS02 COA 2.3.1.- GO:0005576 ... P9WFK7 29345920
    443285 6b0u:C (2.8) BS01 COA 2.3.1.- GO:0005576 ... P9WFK7 29345920
    443286 6b0u:C (2.8) BS02 COA 2.3.1.- GO:0005576 ... P9WFK7 29345920
    443287 6b0v:A (1.29) BS01 C8G 3.6.5.2 GO:0003924 ... P01116 29760531
    443288 6b0v:A (1.29) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 29760531
    443289 6b0v:B (1.29) BS01 C8G 3.6.5.2 GO:0003924 ... P01116 29760531
    443290 6b0v:B (1.29) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 29760531
    443291 6b0x:A (3.8) BS01 peptide ? GO:0019028 ... A4ZFB3 28984245
    443292 6b0x:B (3.8) BS01 peptide ? GO:0019028 ... A4ZFB3 28984245
    443293 6b0x:B (3.8) BS02 peptide ? GO:0019028 ... A4ZFB3 28984245
    443294 6b0x:C (3.8) BS01 peptide ? GO:0019028 ... A4ZFB3 28984245
    443295 6b0x:D (3.8) BS01 peptide ? GO:0019028 ... A4ZFB3 28984245
    443296 6b0x:E (3.8) BS01 peptide ? GO:0019028 ... A4ZFB3 28984245
    443297 6b0x:E (3.8) BS02 peptide ? GO:0019028 ... A4ZFB3 28984245
    443298 6b0x:F (3.8) BS01 peptide ? GO:0019028 ... A4ZFB3 28984245
    443299 6b0x:G (3.8) BS01 peptide ? GO:0019028 ... A4ZFB3 28984245
    443300 6b0y:A (1.43) BS01 8ZG 3.6.5.2 GO:0003924 ... P01116 29760531
    443301 6b0y:A (1.43) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 29760531
    443302 6b0y:B (1.43) BS01 8ZG 3.6.5.2 GO:0003924 ... P01116 29760531
    443303 6b0y:B (1.43) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 29760531
    443304 6b0z:A (2.334) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 29057061
    443305 6b0z:A (2.334) BS02 C81 1.1.1.42 GO:0000287 ... O75874 29057061 MOAD: ic50=0.018uM
    BindingDB: IC50=50nM
    443306 6b0z:A (2.334) BS03 C81 1.1.1.42 GO:0000287 ... O75874 29057061 MOAD: ic50=0.018uM
    BindingDB: IC50=50nM
    443307 6b0z:B (2.334) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 29057061
    443308 6b0z:B (2.334) BS02 C81 1.1.1.42 GO:0000287 ... O75874 29057061 MOAD: ic50=0.018uM
    BindingDB: IC50=50nM
    443309 6b0z:B (2.334) BS03 C81 1.1.1.42 GO:0000287 ... O75874 29057061 MOAD: ic50=0.018uM
    BindingDB: IC50=50nM
    443310 6b0z:C (2.334) BS01 C81 1.1.1.42 GO:0000287 ... O75874 29057061 MOAD: ic50=0.018uM
    BindingDB: IC50=50nM
    443311 6b0z:C (2.334) BS02 NDP 1.1.1.42 GO:0000287 ... O75874 29057061
    443312 6b0z:C (2.334) BS03 C81 1.1.1.42 GO:0000287 ... O75874 29057061 MOAD: ic50=0.018uM
    BindingDB: IC50=50nM
    443313 6b0z:D (2.334) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 29057061
    443314 6b0z:D (2.334) BS02 C81 1.1.1.42 GO:0000287 ... O75874 29057061 MOAD: ic50=0.018uM
    BindingDB: IC50=50nM
    443315 6b0z:D (2.334) BS03 C81 1.1.1.42 GO:0000287 ... O75874 29057061 MOAD: ic50=0.018uM
    BindingDB: IC50=50nM
    443316 6b11:A (1.99) BS01 HEM 1.14.15.34 GO:0004497 ... Q9ZHQ1 N/A
    443317 6b11:A (1.99) BS02 CGM 1.14.15.34 GO:0004497 ... Q9ZHQ1 N/A
    443318 6b11:B (1.99) BS01 HEM 1.14.15.34 GO:0004497 ... Q9ZHQ1 N/A
    443319 6b11:B (1.99) BS02 CGM 1.14.15.34 GO:0004497 ... Q9ZHQ1 N/A
    443320 6b14:H (1.64) BS01 rna N/A N/A N/A 29309709
    443321 6b14:L (1.64) BS01 rna N/A N/A N/A 29309709
    443322 6b16:A (2.285) BS01 C7Y 2.7.11.1 GO:0004672 ... Q13153 27346791 MOAD: Ki=32nM
    BindingDB: Ki=32nM
    443323 6b16:B (2.285) BS01 C7Y 2.7.11.1 GO:0004672 ... Q13153 27346791 MOAD: Ki=32nM
    BindingDB: Ki=32nM
    443324 6b18:A (2.3) BS01 C8A N/A GO:0006797 ... N/A N/A
    443325 6b1b:A (1.944) BS01 TMO ? GO:0004497 ... A0A140NG21 31068633
    443326 6b1b:B (1.944) BS01 TMO ? GO:0004497 ... A0A140NG21 31068633
    443327 6b1b:B (1.944) BS02 TMO ? GO:0004497 ... A0A140NG21 31068633
    443328 6b1b:B (1.944) BS03 TMO ? GO:0004497 ... A0A140NG21 31068633
    443329 6b1c:A (2.163) BS01 C9J 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 29259749 MOAD: Kd=0.111uM
    BindingDB: Kd=111nM, Ki=75nM
    443330 6b1c:A (2.163) BS02 C9J 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 29259749 MOAD: Kd=0.111uM
    BindingDB: Kd=111nM, Ki=75nM
    443331 6b1c:B (2.163) BS01 C9J 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 29259749 MOAD: Kd=0.111uM
    BindingDB: Kd=111nM, Ki=75nM
    443332 6b1c:C (2.163) BS01 C9J 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 29259749 BindingDB: Kd=111nM, Ki=75nM
    443333 6b1d:A (2.51) BS01 QUE ? GO:0004864 ... Q6VT83 N/A
    443334 6b1d:C (2.51) BS01 QUE ? GO:0004864 ... Q6VT83 N/A
    443335 6b1d:C (2.51) BS02 BGC ? GO:0004864 ... Q6VT83 N/A
    443336 6b1e:A (1.77) BS01 LF7 3.4.14.5 GO:0001618 ... P27487 30815539 BindingDB: IC50=3.5nM
    443337 6b1e:B (1.77) BS01 LF7 3.4.14.5 GO:0001618 ... P27487 30815539 BindingDB: IC50=3.5nM
    443338 6b1f:A (1.44) BS01 C8Y 3.5.2.6 GO:0008800 ... Q9F663 29627985
    443339 6b1f:B (1.44) BS01 C8Y 3.5.2.6 GO:0008800 ... Q9F663 29627985
    443340 6b1h:A (1.8) BS01 C8Y 3.5.2.6 GO:0008800 ... Q9F663 29627985
    443341 6b1h:B (1.8) BS01 C8Y 3.5.2.6 GO:0008800 ... Q9F663 29627985
    443342 6b1h:B (1.8) BS02 SO4 3.5.2.6 GO:0008800 ... Q9F663 29627985
    443343 6b1i:A (2.3) BS01 ADP 3.6.4.10 GO:0005524 ... P11142 29300467
    443344 6b1i:B (2.3) BS01 ADP 3.6.4.10 GO:0005524 ... P11142 29300467
    443345 6b1j:A (1.6) BS01 C8V 3.5.2.6 GO:0008800 ... Q9F663 29627985
    443346 6b1j:B (1.6) BS01 C8V 3.5.2.6 GO:0008800 ... Q9F663 29627985
    443347 6b1k:A (1.17) BS01 C9G 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 29259749 MOAD: Kd=0.213uM
    BindingDB: Ki=363nM, Kd=213nM
    443348 6b1k:A (1.17) BS02 C9G 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 29259749 MOAD: Kd=0.213uM
    BindingDB: Ki=363nM, Kd=213nM
    443349 6b1k:B (1.17) BS01 C9G 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 29259749 MOAD: Kd=0.213uM
    BindingDB: Ki=363nM, Kd=213nM
    443350 6b1k:B (1.17) BS02 C9G 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 29259749 MOAD: Kd=0.213uM
    BindingDB: Ki=363nM, Kd=213nM
    443351 6b1k:C (1.17) BS01 C9G 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 29259749 MOAD: Kd=0.213uM
    BindingDB: Ki=363nM, Kd=213nM
    443352 6b1k:C (1.17) BS02 C9G 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 29259749 MOAD: Kd=0.213uM
    BindingDB: Ki=363nM, Kd=213nM
    443353 6b1l:A (2.3) BS01 MYA 2.3.1.97 GO:0004379 ... A5K1A2 N/A
    443354 6b1l:A (2.3) BS02 CJ4 2.3.1.97 GO:0004379 ... A5K1A2 N/A
    443355 6b1m:A (1.9) BS01 ANP 3.6.4.10 GO:0005524 ... P11142 29300467
    443356 6b1m:B (1.9) BS01 ANP 3.6.4.10 GO:0005524 ... P11142 29300467
    443357 6b1n:A (1.8) BS01 ADP 3.6.4.10 GO:0005524 ... P11142 29300467
    443358 6b1n:B (1.8) BS01 ADP 3.6.4.10 GO:0005524 ... P11142 29300467
    443359 6b1o:A (1.91) BS01 C8S 3.4.14.5 GO:0001618 ... P27487 30815539
    443360 6b1o:B (1.91) BS01 C8S 3.4.14.5 GO:0001618 ... P27487 30815539
    443361 6b1q:A (1.9) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30148365
    443362 6b1q:A (1.9) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30148365
    443363 6b1r:A (1.69) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30148365
    443364 6b1r:A (1.69) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30148365
    443365 6b1s:A (2.0) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30148365
    443366 6b1s:A (2.0) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30148365
    443367 6b1s:B (2.0) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30148365
    443368 6b1s:B (2.0) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30148365
    443369 6b1t:A (3.2) BS01 peptide ? GO:0005198 ... P04133 28978703
    443370 6b1t:C (3.2) BS01 peptide ? GO:0005198 ... P04133 28978703
    443371 6b1t:D (3.2) BS01 peptide ? GO:0005198 ... P04133 28978703
    443372 6b1t:D (3.2) BS02 peptide ? GO:0005198 ... P04133 28978703
    443373 6b1t:E (3.2) BS01 peptide ? GO:0005198 ... P04133 28978703
    443374 6b1t:E (3.2) BS02 peptide ? GO:0005198 ... P04133 28978703
    443375 6b1t:F (3.2) BS01 peptide ? GO:0005198 ... P04133 28978703
    443376 6b1t:F (3.2) BS02 peptide ? GO:0005198 ... P04133 28978703
    443377 6b1t:O (3.2) BS01 peptide ? GO:0019028 ... P24936 28978703
    443378 6b1t:X (3.2) BS01 peptide ? GO:0019028 ... P24937 28978703
    443379 6b1t:X (3.2) BS02 peptide ? GO:0019028 ... P24937 28978703
    443380 6b1t:X (3.2) BS03 peptide ? GO:0019028 ... P24937 28978703
    443381 6b1u:A (2.77) BS01 STU 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 29657085
    443382 6b1u:A (2.77) BS02 CG7 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 29657085
    443383 6b1u:B (2.77) BS01 CG7 ? GO:0005515 ... Q9Y478 29657085
    443384 6b1u:C (2.77) BS01 STU 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 29657085
    443385 6b1u:C (2.77) BS02 CG7 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 29657085
    443386 6b1u:D (2.77) BS01 CG7 ? GO:0005515 ... Q9Y478 29657085
    443387 6b1u:E (2.77) BS01 AMP ? GO:0004691 ... P54619 29657085
    443388 6b1u:E (2.77) BS02 AMP ? GO:0004691 ... P54619 29657085
    443389 6b1u:F (2.77) BS01 AMP ? GO:0004691 ... P54619 29657085
    443390 6b1u:F (2.77) BS02 AMP ? GO:0004691 ... P54619 29657085
    443391 6b1v:A (2.84) BS01 DGS N/A N/A N/A 29681469
    443392 6b1v:A (2.84) BS02 G4S N/A N/A N/A 29681469
    443393 6b1v:A (2.84) BS03 DGS N/A N/A N/A 29681469
    443394 6b1v:A (2.84) BS04 G4S N/A N/A N/A 29681469
    443395 6b1v:A (2.84) BS05 CA N/A N/A N/A 29681469
    443396 6b1v:B (2.84) BS01 DGS N/A N/A N/A 29681469
    443397 6b1v:B (2.84) BS02 G4S N/A N/A N/A 29681469
    443398 6b1v:B (2.84) BS03 DGS N/A N/A N/A 29681469
    443399 6b1v:B (2.84) BS04 DGS N/A N/A N/A 29681469
    443400 6b1v:B (2.84) BS05 CA N/A N/A N/A 29681469

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).