SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    45001 1qkp:A (2.1) BS01 RET ? GO:0005216 ... P02945 10548112
    45002 1qkq:A (1.8) BS01 MAN 3.1.1.5 GO:0002667 ... Q05315 10529229
    45003 1qks:A (1.28) BS01 HEC 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 7736589
    45004 1qks:A (1.28) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 7736589
    45005 1qks:B (1.28) BS01 HEC 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 7736589
    45006 1qks:B (1.28) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 7736589
    45007 1qkt:A (2.2) BS01 EST ? N/A P03372 11278577 MOAD: Kd=0.92nM
    BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    45008 1qku:A (3.2) BS01 EST ? N/A P03372 11278577 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    45009 1qku:B (3.2) BS01 EST ? N/A P03372 11278577 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    45010 1qku:C (3.2) BS01 EST ? N/A P03372 11278577 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    45011 1qkz:H (1.95) BS01 peptide N/A N/A N/A 10512717
    45012 1qkz:L (1.95) BS01 peptide N/A N/A N/A 10512717
    45013 1ql3:A (1.4) BS01 HEC ? GO:0009055 ... P54820 10623555
    45014 1ql3:B (1.4) BS01 HEC ? GO:0009055 ... P54820 10623555
    45015 1ql3:C (1.4) BS01 HEC ? GO:0009055 ... P54820 10623555
    45016 1ql3:D (1.4) BS01 HEC ? GO:0009055 ... P54820 10623555
    45017 1ql4:A (1.5) BS01 HEC ? GO:0009055 ... P54820 10623555
    45018 1ql4:B (1.5) BS01 HEC ? GO:0009055 ... P54820 10623555
    45019 1ql4:C (1.5) BS01 HEC ? GO:0009055 ... P54820 10623555
    45020 1ql4:D (1.5) BS01 HEC ? GO:0009055 ... P54820 10623555
    45021 1ql6:A (2.4) BS01 ATP 2.7.11.1
    2.7.11.19
    2.7.11.26
    GO:0004672 ... P00518 10545198
    45022 1ql6:A (2.4) BS02 MN 2.7.11.1
    2.7.11.19
    2.7.11.26
    GO:0004672 ... P00518 10545198
    45023 1ql7:A (2.1) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11921406
    45024 1ql7:A (2.1) BS02 ZEN 3.4.21.4 GO:0004175 ... P00760 11921406 MOAD: Kd=15uM
    45025 1ql8:A (3.0) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11921406
    45026 1ql8:A (3.0) BS02 ZEN 3.4.21.4 GO:0004175 ... P00760 11921406
    45027 1ql9:A (2.3) BS01 CA 3.4.21.4 GO:0004252 ... P00763 12527302
    45028 1ql9:A (2.3) BS02 ZEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=4.45uM
    45029 1qlb:A (2.33) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 10586875
    45030 1qlb:A (2.33) BS02 FUM 1.3.5.1 GO:0000104 ... P17412 10586875
    45031 1qlb:A (2.33) BS03 CA 1.3.5.1 GO:0000104 ... P17412 10586875
    45032 1qlb:B (2.33) BS01 FES 1.3.5.1 GO:0005886 ... P17596 10586875
    45033 1qlb:B (2.33) BS02 F3S 1.3.5.1 GO:0005886 ... P17596 10586875
    45034 1qlb:B (2.33) BS03 SF4 1.3.5.1 GO:0005886 ... P17596 10586875
    45035 1qlb:C (2.33) BS01 HEM ? GO:0005886 ... P17413 10586875
    45036 1qlb:C (2.33) BS02 HEM ? GO:0005886 ... P17413 10586875
    45037 1qlb:D (2.33) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 10586875
    45038 1qlb:D (2.33) BS02 FUM 1.3.5.1 GO:0000104 ... P17412 10586875
    45039 1qlb:D (2.33) BS03 CA 1.3.5.1 GO:0000104 ... P17412 10586875
    45040 1qlb:E (2.33) BS01 FES 1.3.5.1 GO:0005886 ... P17596 10586875
    45041 1qlb:E (2.33) BS02 F3S 1.3.5.1 GO:0005886 ... P17596 10586875
    45042 1qlb:E (2.33) BS03 SF4 1.3.5.1 GO:0005886 ... P17596 10586875
    45043 1qlb:F (2.33) BS01 HEM ? GO:0005886 ... P17413 10586875
    45044 1qlb:F (2.33) BS02 HEM ? GO:0005886 ... P17413 10586875
    45045 1qle:A (3.0) BS01 HEA 7.1.1.9 GO:0004129 ... P98002 10559205
    45046 1qle:A (3.0) BS02 HEA 7.1.1.9 GO:0004129 ... P98002 10559205
    45047 1qle:A (3.0) BS03 CU 7.1.1.9 GO:0004129 ... P98002 10559205
    45048 1qle:A (3.0) BS04 CA 7.1.1.9 GO:0004129 ... P98002 10559205
    45049 1qle:A (3.0) BS05 MN 7.1.1.9 GO:0004129 ... P98002 10559205
    45050 1qle:B (3.0) BS01 HEA 7.1.1.9 GO:0004129 ... P08306 10559205
    45051 1qle:B (3.0) BS02 CUA 7.1.1.9 GO:0004129 ... P08306 10559205
    45052 1qlf:A (2.65) BS01 peptide ? N/A P01899 10023771
    45053 1qlg:A (2.2) BS01 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    45054 1qlg:A (2.2) BS02 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    45055 1qlg:A (2.2) BS03 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    45056 1qlg:A (2.2) BS04 MG 3.1.3.8 GO:0005576 ... O66037 10655618
    45057 1qlg:A (2.2) BS05 MG 3.1.3.8 GO:0005576 ... O66037 10655618
    45058 1qlh:A (2.07) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 10529241
    45059 1qlh:A (2.07) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 10529241
    45060 1qlh:A (2.07) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 10529241
    45061 1qli:A (-1.00) BS01 ZN ? N/A Q05158 9115265
    45062 1qli:A (-1.00) BS02 ZN ? N/A Q05158 9115265
    45063 1qlj:A (2.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 10529241
    45064 1qlj:A (2.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 10529241
    45065 1qlk:A (-1.00) BS01 CA ? GO:0001726 ... P04631 9485423
    45066 1qlk:A (-1.00) BS02 CA ? GO:0001726 ... P04631 9485423
    45067 1qlk:B (-1.00) BS01 CA ? GO:0001726 ... P04631 9485423
    45068 1qlk:B (-1.00) BS02 CA ? GO:0001726 ... P04631 9485423
    45069 1qll:A (2.04) BS01 TDA 3.1.1.4 GO:0004623 ... P82287 11141053
    45070 1qll:B (2.04) BS01 TDA 3.1.1.4 GO:0004623 ... P82287 11141053
    45071 1qlm:A (2.0) BS01 PO4 3.5.4.27 GO:0005737 ... P94954 10545331
    45072 1qlm:A (2.0) BS02 PO4 3.5.4.27 GO:0005737 ... P94954 10545331
    45073 1qlm:A (2.0) BS03 PO4 3.5.4.27 GO:0005737 ... P94954 10545331
    45074 1qln:A (2.4) BS01 dna 2.7.7.6 GO:0000428 ... P00573 10600732
    45075 1qln:A (2.4) BS02 rna 2.7.7.6 GO:0000428 ... P00573 10600732
    45076 1qln:A (2.4) BS03 dna 2.7.7.6 GO:0000428 ... P00573 10600732
    45077 1qlq:A (1.42) BS01 SO4 ? GO:0004867 ... P00974 10653700
    45078 1qlr:B (2.83) BS01 FUC N/A N/A N/A 11086081
    45079 1qlr:D (2.83) BS01 FUC N/A N/A N/A 11086081
    45080 1qls:A (2.3) BS01 peptide ? GO:0005509 ... P31950 10673436
    45081 1qls:A (2.3) BS02 CA ? GO:0005509 ... P31950 10673436
    45082 1qls:A (2.3) BS03 CA ? GO:0005509 ... P31950 10673436
    45083 1qlt:A (2.2) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=4.6mM
    45084 1qlt:B (2.2) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=4.6mM
    45085 1qlu:A (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10585424
    45086 1qlu:A (2.4) BS02 EUG 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=22uM
    45087 1qlu:B (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10585424
    45088 1qlu:B (2.4) BS02 EUG 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=22uM
    45089 1qm5:A (2.0) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    45090 1qm5:A (2.0) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    45091 1qm5:A (2.0) BS03 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    45092 1qm5:A (2.0) BS04 SGC 2.4.1.1 GO:0004645 ... P00490 10469642
    45093 1qm5:A (2.0) BS05 PO4 2.4.1.1 GO:0004645 ... P00490 10469642
    45094 1qm5:A (2.0) BS06 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    45095 1qm5:A (2.0) BS07 PLP 2.4.1.1 GO:0004645 ... P00490 10469642
    45096 1qm5:B (2.0) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    45097 1qm5:B (2.0) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    45098 1qm5:B (2.0) BS03 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    45099 1qm5:B (2.0) BS04 SGC 2.4.1.1 GO:0004645 ... P00490 10469642
    45100 1qm5:B (2.0) BS05 PO4 2.4.1.1 GO:0004645 ... P00490 10469642
    45101 1qm5:B (2.0) BS06 GLC 2.4.1.1 GO:0004645 ... P00490 10469642
    45102 1qm5:B (2.0) BS07 PLP 2.4.1.1 GO:0004645 ... P00490 10469642
    45103 1qm6:A (2.5) BS01 ZN 3.1.4.3 GO:0004629 ... P0C216 10610794
    45104 1qm6:A (2.5) BS02 ZN 3.1.4.3 GO:0004629 ... P0C216 10610794
    45105 1qm6:B (2.5) BS01 ZN 3.1.4.3 GO:0004629 ... P0C216 10610794
    45106 1qm6:B (2.5) BS02 ZN 3.1.4.3 GO:0004629 ... P0C216 10610794
    45107 1qm8:A (2.5) BS01 RET ? GO:0005216 ... P02945 9769218
    45108 1qmd:A (2.2) BS01 ZN 3.1.4.3 GO:0004629 ... P0C216 10610794
    45109 1qmd:A (2.2) BS02 ZN 3.1.4.3 GO:0004629 ... P0C216 10610794
    45110 1qmd:A (2.2) BS03 CA 3.1.4.3 GO:0004629 ... P0C216 10610794
    45111 1qmd:A (2.2) BS04 CA 3.1.4.3 GO:0004629 ... P0C216 10610794
    45112 1qmd:A (2.2) BS05 CA 3.1.4.3 GO:0004629 ... P0C216 10610794
    45113 1qmd:B (2.2) BS01 ZN 3.1.4.3 GO:0004629 ... P0C216 10610794
    45114 1qmd:B (2.2) BS02 ZN 3.1.4.3 GO:0004629 ... P0C216 10610794
    45115 1qmd:B (2.2) BS03 CA 3.1.4.3 GO:0004629 ... P0C216 10610794
    45116 1qmd:B (2.2) BS04 CA 3.1.4.3 GO:0004629 ... P0C216 10610794
    45117 1qmd:B (2.2) BS05 CA 3.1.4.3 GO:0004629 ... P0C216 10610794
    45118 1qmf:A (2.8) BS01 CES ? GO:0005886 ... P14677 10860753
    45119 1qmf:A (2.8) BS02 KEF ? GO:0005886 ... P14677 10860753
    45120 1qmg:A (1.6) BS01 APX 1.1.1.86 GO:0004455 ... Q01292 10739911
    45121 1qmg:A (1.6) BS02 MN 1.1.1.86 GO:0004455 ... Q01292 10739911
    45122 1qmg:A (1.6) BS03 DMV 1.1.1.86 GO:0004455 ... Q01292 10739911
    45123 1qmg:B (1.6) BS01 APX 1.1.1.86 GO:0004455 ... Q01292 10739911
    45124 1qmg:B (1.6) BS02 MN 1.1.1.86 GO:0004455 ... Q01292 10739911
    45125 1qmg:B (1.6) BS03 DMV 1.1.1.86 GO:0004455 ... Q01292 10739911
    45126 1qmg:C (1.6) BS01 APX 1.1.1.86 GO:0004455 ... Q01292 10739911
    45127 1qmg:C (1.6) BS02 MN 1.1.1.86 GO:0004455 ... Q01292 10739911
    45128 1qmg:C (1.6) BS03 DMV 1.1.1.86 GO:0004455 ... Q01292 10739911
    45129 1qmg:D (1.6) BS01 APX 1.1.1.86 GO:0004455 ... Q01292 10739911
    45130 1qmg:D (1.6) BS02 MN 1.1.1.86 GO:0004455 ... Q01292 10739911
    45131 1qmg:D (1.6) BS03 DMV 1.1.1.86 GO:0004455 ... Q01292 10739911
    45132 1qmh:B (2.1) BS01 DTO 6.5.1.4 GO:0003824 ... P46849 10673421
    45133 1qml:A (3.0) BS01 HG 4.2.1.24 GO:0004655 ... P05373 10739915
    45134 1qmo:A (3.5) BS01 MAN ? GO:0030246 ... Q9ZTA9 10843844
    45135 1qmo:B (3.5) BS01 MAN ? GO:0030246 ... Q9ZTA9 10843844
    45136 1qmo:C (3.5) BS01 MAN ? GO:0030246 ... Q9ZTA9 10843844
    45137 1qmo:D (3.5) BS01 MAN ? GO:0030246 ... Q9ZTA9 10843844
    45138 1qmo:E (3.5) BS01 CA ? GO:0030246 ... Q9ZTA9 10843844
    45139 1qmo:E (3.5) BS02 MN ? GO:0030246 ... Q9ZTA9 10843844
    45140 1qmo:E (3.5) BS03 MAN ? GO:0030246 ... Q9ZTA9 10843844
    45141 1qmo:F (3.5) BS01 CA ? GO:0030246 ... Q9ZTA9 10843844
    45142 1qmo:F (3.5) BS02 MN ? GO:0030246 ... Q9ZTA9 10843844
    45143 1qmo:F (3.5) BS03 MAN ? GO:0030246 ... Q9ZTA9 10843844
    45144 1qmo:G (3.5) BS01 CA ? GO:0030246 ... Q9ZTA9 10843844
    45145 1qmo:G (3.5) BS02 MN ? GO:0030246 ... Q9ZTA9 10843844
    45146 1qmo:G (3.5) BS03 MAN ? GO:0030246 ... Q9ZTA9 10843844
    45147 1qmo:H (3.5) BS01 CA ? GO:0030246 ... Q9ZTA9 10843844
    45148 1qmo:H (3.5) BS02 MN ? GO:0030246 ... Q9ZTA9 10843844
    45149 1qmo:H (3.5) BS03 MAN ? GO:0030246 ... Q9ZTA9 10843844
    45150 1qmp:A (2.0) BS01 CA ? GO:0000160 ... P52934 10556024
    45151 1qmp:B (2.0) BS01 CA ? GO:0000160 ... P52934 10556024
    45152 1qmp:C (2.0) BS01 CA ? GO:0000160 ... P52934 10556024
    45153 1qmp:D (2.0) BS01 CA ? GO:0000160 ... P52934 10556024
    45154 1qmq:A (1.55) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 10557259
    45155 1qmq:A (1.55) BS02 DRB 1.14.15.1 GO:0004497 ... P00183 10557259
    45156 1qmq:A (1.55) BS03 DRB 1.14.15.1 GO:0004497 ... P00183 10557259
    45157 1qmu:A (2.7) BS01 ZN 3.4.17.22 GO:0004181 ... P83852 10545093
    45158 1qmz:A (2.2) BS01 peptide 2.7.11.22 GO:0000082 ... P24941 10559988
    45159 1qmz:A (2.2) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 10559988
    45160 1qmz:A (2.2) BS03 MG 2.7.11.22 GO:0000082 ... P24941 10559988
    45161 1qmz:C (2.2) BS01 peptide 2.7.11.22 GO:0000082 ... P24941 10559988
    45162 1qmz:C (2.2) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 10559988
    45163 1qmz:C (2.2) BS03 MG 2.7.11.22 GO:0000082 ... P24941 10559988
    45164 1qn0:A (-1.00) BS01 HEC ? GO:0009055 ... P00133 10756105
    45165 1qn0:A (-1.00) BS02 HEC ? GO:0009055 ... P00133 10756105
    45166 1qn0:A (-1.00) BS03 HEC ? GO:0009055 ... P00133 10756105
    45167 1qn0:A (-1.00) BS04 HEC ? GO:0009055 ... P00133 10756105
    45168 1qn1:A (-1.00) BS01 HEC ? GO:0009055 ... P00133 10756105
    45169 1qn1:A (-1.00) BS02 HEC ? GO:0009055 ... P00133 10756105
    45170 1qn1:A (-1.00) BS03 HEC ? GO:0009055 ... P00133 10756105
    45171 1qn1:A (-1.00) BS04 HEC ? GO:0009055 ... P00133 10756105
    45172 1qn2:A (2.01) BS01 HEC ? GO:0009055 ... Q7SIA4 10386873
    45173 1qn2:B (2.01) BS01 HEC ? GO:0009055 ... Q7SIA4 10386873
    45174 1qn2:C (2.01) BS01 HEC ? GO:0009055 ... Q7SIA4 10386873
    45175 1qn3:A (1.95) BS01 dna ? GO:0003677 ... P28147 10617571
    45176 1qn3:A (1.95) BS02 dna ? GO:0003677 ... P28147 10617571
    45177 1qn3:B (1.95) BS01 dna ? GO:0003677 ... P28147 10617571
    45178 1qn3:B (1.95) BS02 dna ? GO:0003677 ... P28147 10617571
    45179 1qn4:A (1.86) BS01 dna ? GO:0003677 ... P28147 10617571
    45180 1qn4:A (1.86) BS02 dna ? GO:0003677 ... P28147 10617571
    45181 1qn4:B (1.86) BS01 dna ? GO:0003677 ... P28147 10617571
    45182 1qn4:B (1.86) BS02 dna ? GO:0003677 ... P28147 10617571
    45183 1qn5:A (1.93) BS01 dna ? GO:0003677 ... P28147 10617571
    45184 1qn5:A (1.93) BS02 dna ? GO:0003677 ... P28147 10617571
    45185 1qn5:B (1.93) BS01 dna ? GO:0003677 ... P28147 10617571
    45186 1qn5:B (1.93) BS02 dna ? GO:0003677 ... P28147 10617571
    45187 1qn6:A (2.1) BS01 dna ? GO:0003677 ... P28147 10617571
    45188 1qn6:A (2.1) BS02 dna ? GO:0003677 ... P28147 10617571
    45189 1qn6:B (2.1) BS01 dna ? GO:0003677 ... P28147 10617571
    45190 1qn6:B (2.1) BS02 dna ? GO:0003677 ... P28147 10617571
    45191 1qn7:A (2.3) BS01 dna ? GO:0003677 ... P28147 10617571
    45192 1qn7:A (2.3) BS02 dna ? GO:0003677 ... P28147 10617571
    45193 1qn7:B (2.3) BS01 dna ? GO:0003677 ... P28147 10617571
    45194 1qn7:B (2.3) BS02 dna ? GO:0003677 ... P28147 10617571
    45195 1qn8:A (2.1) BS01 dna ? GO:0003677 ... P28147 10617571
    45196 1qn8:A (2.1) BS02 dna ? GO:0003677 ... P28147 10617571
    45197 1qn8:B (2.1) BS01 dna ? GO:0003677 ... P28147 10617571
    45198 1qn8:B (2.1) BS02 dna ? GO:0003677 ... P28147 10617571
    45199 1qn9:A (1.9) BS01 dna ? GO:0003677 ... P28147 10617571
    45200 1qn9:A (1.9) BS02 dna ? GO:0003677 ... P28147 10617571

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).