SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    45601 1qsi:B (1.7) BS01 HEG ? GO:0004601 ... P68871 10512707
    45602 1qsi:C (1.7) BS01 HEM ? GO:0004601 ... P69905 10512707
    45603 1qsi:C (1.7) BS02 CMO ? GO:0004601 ... P69905 10512707
    45604 1qsi:D (1.7) BS01 HEG ? GO:0004601 ... P68871 10512707
    45605 1qsl:A (2.2) BS01 dna 2.7.7.7 GO:0003676 ... P00582 10631518
    45606 1qsl:A (2.2) BS02 EU 2.7.7.7 GO:0003676 ... P00582 10631518
    45607 1qsm:A (2.4) BS01 ACO 2.3.1.48 GO:0004059 ... Q06592 10600387
    45608 1qsm:B (2.4) BS01 ACO 2.3.1.48 GO:0004059 ... Q06592 10600387
    45609 1qsm:C (2.4) BS01 ACO 2.3.1.48 GO:0004059 ... Q06592 10600387
    45610 1qsm:D (2.4) BS01 ACO 2.3.1.48 GO:0004059 ... Q06592 10600387
    45611 1qsn:A (2.2) BS01 peptide 2.3.1.48 GO:0004402 ... Q27198 10485713
    45612 1qsn:A (2.2) BS02 COA 2.3.1.48 GO:0004402 ... Q27198 10485713
    45613 1qsr:A (2.0) BS01 ACO 2.3.1.48 GO:0004402 ... Q27198 10485713
    45614 1qss:A (2.3) BS01 dna 2.7.7.7 GO:0001882 ... P19821 10449720
    45615 1qss:A (2.3) BS02 dna 2.7.7.7 GO:0001882 ... P19821 10449720
    45616 1qss:A (2.3) BS03 MG 2.7.7.7 GO:0001882 ... P19821 10449720
    45617 1qss:A (2.3) BS04 MG 2.7.7.7 GO:0001882 ... P19821 10449720
    45618 1qss:A (2.3) BS05 DG3 2.7.7.7 GO:0001882 ... P19821 10449720
    45619 1qsu:A (1.75) BS01 peptide N/A N/A N/A 10966815
    45620 1qsu:B (1.75) BS01 peptide N/A N/A N/A 10966815
    45621 1qsy:A (2.3) BS01 dna 2.7.7.7 GO:0001882 ... P19821 10449720
    45622 1qsy:A (2.3) BS02 dna 2.7.7.7 GO:0001882 ... P19821 10449720
    45623 1qsy:A (2.3) BS03 MG 2.7.7.7 GO:0001882 ... P19821 10449720
    45624 1qsy:A (2.3) BS04 MG 2.7.7.7 GO:0001882 ... P19821 10449720
    45625 1qsy:A (2.3) BS05 DDS 2.7.7.7 GO:0001882 ... P19821 10449720
    45626 1qt1:A (1.85) BS01 CO 5.3.1.5 GO:0000287 ... P50910 10666592
    45627 1qt1:A (1.85) BS02 CO 5.3.1.5 GO:0000287 ... P50910 10666592
    45628 1qt1:B (1.85) BS01 CO 5.3.1.5 GO:0000287 ... P50910 10666592
    45629 1qt1:B (1.85) BS02 CO 5.3.1.5 GO:0000287 ... P50910 10666592
    45630 1qt9:A (1.3) BS01 FES ? GO:0005515 ... P0A3C8 10625442
    45631 1qti:A (2.5) BS01 GNT 3.1.1.7 GO:0001507 ... P04058 11119642 BindingDB: IC50=1069nM, Ki=1.9e+2nM
    45632 1qtk:A (2.03) BS01 KR 3.2.1.17 GO:0003796 ... P00698 9443341
    45633 1qtm:A (2.3) BS01 dna 2.7.7.7 GO:0001882 ... P19821 10449720
    45634 1qtm:A (2.3) BS02 dna 2.7.7.7 GO:0001882 ... P19821 10449720
    45635 1qtm:A (2.3) BS03 MG 2.7.7.7 GO:0001882 ... P19821 10449720
    45636 1qtm:A (2.3) BS04 MG 2.7.7.7 GO:0001882 ... P19821 10449720
    45637 1qtm:A (2.3) BS05 TTP 2.7.7.7 GO:0001882 ... P19821 10449720
    45638 1qtn:A (1.2) BS01 peptide 3.4.22.61 GO:0004197 ... Q14790 10508785
    45639 1qtn:B (1.2) BS01 peptide 3.4.22.61 GO:0004197 ... Q14790 10508785
    45640 1qtq:A (2.25) BS01 rna 6.1.1.18 GO:0000166 ... P00962 9562563
    45641 1qtq:A (2.25) BS02 QSI 6.1.1.18 GO:0000166 ... P00962 9562563
    45642 1qtw:A (1.02) BS01 ZN 3.1.21.2 GO:0003677 ... P0A6C1 10458614
    45643 1qtw:A (1.02) BS02 ZN 3.1.21.2 GO:0003677 ... P0A6C1 10458614
    45644 1qtw:A (1.02) BS03 ZN 3.1.21.2 GO:0003677 ... P0A6C1 10458614
    45645 1qtx:A (1.65) BS01 peptide ? GO:0005509 ... A0MMD0 N/A
    45646 1qtx:A (1.65) BS02 CA ? GO:0005509 ... A0MMD0 N/A
    45647 1qtx:A (1.65) BS03 CA ? GO:0005509 ... A0MMD0 N/A
    45648 1qtx:A (1.65) BS04 CA ? GO:0005509 ... A0MMD0 N/A
    45649 1qtx:A (1.65) BS05 CA ? GO:0005509 ... A0MMD0 N/A
    45650 1qu0:A (2.35) BS01 CA ? N/A Q60675 10619025
    45651 1qu0:A (2.35) BS02 SO4 ? N/A Q60675 10619025
    45652 1qu0:B (2.35) BS01 CA ? N/A Q60675 10619025
    45653 1qu0:C (2.35) BS01 CA ? N/A Q60675 10619025
    45654 1qu0:C (2.35) BS02 SO4 ? N/A Q60675 10619025
    45655 1qu0:D (2.35) BS01 CA ? N/A Q60675 10619025
    45656 1qu0:D (2.35) BS02 SO4 ? N/A Q60675 10619025
    45657 1qu0:D (2.35) BS03 SO4 ? N/A Q60675 10619025
    45658 1qu2:A (2.2) BS01 rna 6.1.1.5 GO:0000049 ... P41972 10446055
    45659 1qu2:A (2.2) BS02 ZN 6.1.1.5 GO:0000049 ... P41972 10446055
    45660 1qu2:A (2.2) BS03 MRC 6.1.1.5 GO:0000049 ... P41972 10446055 BindingDB: IC50=20000nM
    45661 1qu3:A (2.9) BS01 rna 6.1.1.5 GO:0000049 ... P41972 10446055
    45662 1qu3:A (2.9) BS02 MRC 6.1.1.5 GO:0000049 ... P41972 10446055 BindingDB: IC50=20000nM
    45663 1qu4:A (2.9) BS01 PLP 4.1.1.17 GO:0003824 ... P07805 10563800
    45664 1qu4:B (2.9) BS01 PLP 4.1.1.17 GO:0003824 ... P07805 10563800
    45665 1qu4:C (2.9) BS01 PLP 4.1.1.17 GO:0003824 ... P07805 10563800
    45666 1qu4:D (2.9) BS01 PLP 4.1.1.17 GO:0003824 ... P07805 10563800
    45667 1qua:A (2.2) BS01 ZN 3.4.24.- GO:0004222 ... P60244 10531480
    45668 1que:A (1.8) BS01 SO4 1.18.1.2 GO:0016491 ... P21890 8890910
    45669 1que:A (1.8) BS02 FAD 1.18.1.2 GO:0016491 ... P21890 8890910
    45670 1quf:A (2.25) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 8890910
    45671 1quf:A (2.25) BS02 NAP 1.18.1.2 GO:0016491 ... P21890 8890910
    45672 1qui:A (1.9) BS01 PO4 ? GO:0006817 ... P0AG82 8652549
    45673 1quj:A (1.9) BS01 PO4 ? GO:0006817 ... P0AG82 8652549
    45674 1quk:A (1.7) BS01 PO4 ? GO:0006817 ... P0AG82 8652549
    45675 1qul:A (1.7) BS01 PO4 ? GO:0006817 ... P0AG82 8652549
    45676 1qum:A (1.55) BS01 dna 3.1.21.2 GO:0003677 ... P0A6C1 10458614
    45677 1qum:A (1.55) BS02 dna 3.1.21.2 GO:0003677 ... P0A6C1 10458614
    45678 1qum:A (1.55) BS03 dna 3.1.21.2 GO:0003677 ... P0A6C1 10458614
    45679 1qum:A (1.55) BS04 ZN 3.1.21.2 GO:0003677 ... P0A6C1 10458614
    45680 1qum:A (1.55) BS05 ZN 3.1.21.2 GO:0003677 ... P0A6C1 10458614
    45681 1qum:A (1.55) BS06 ZN 3.1.21.2 GO:0003677 ... P0A6C1 10458614
    45682 1qur:H (2.0) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10504391
    45683 1qur:H (2.0) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 10504391
    45684 1qv0:A (1.1) BS01 CZH 1.13.12.5 GO:0005509 ... Q27709 14592432
    45685 1qv1:A (1.1) BS01 CA 1.13.12.5 GO:0005509 ... Q27709 14592432
    45686 1qv1:A (1.1) BS02 CZH 1.13.12.5 GO:0005509 ... Q27709 14592432
    45687 1qv6:A (1.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 15023053
    45688 1qv6:A (1.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 15023053
    45689 1qv6:A (1.8) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 15023053
    45690 1qv6:A (1.8) BS04 24B 1.1.1.1 GO:0004022 ... P00327 15023053
    45691 1qv6:B (1.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 15023053
    45692 1qv6:B (1.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 15023053
    45693 1qv6:B (1.8) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 15023053
    45694 1qv6:B (1.8) BS04 24B 1.1.1.1 GO:0004022 ... P00327 15023053
    45695 1qv7:A (1.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 15023053
    45696 1qv7:A (1.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 15023053
    45697 1qv7:A (1.8) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 15023053
    45698 1qv7:A (1.8) BS04 DFB 1.1.1.1 GO:0004022 ... P00327 15023053
    45699 1qv7:B (1.8) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 15023053
    45700 1qv7:B (1.8) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 15023053
    45701 1qv7:B (1.8) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 15023053
    45702 1qv7:B (1.8) BS04 DFB 1.1.1.1 GO:0004022 ... P00327 15023053
    45703 1qvf:1 (3.1) BS01 rna ? GO:0003735 ... P22452 14561884
    45704 1qvf:2 (3.1) BS01 rna ? GO:0003735 ... P32411 14561884
    45705 1qvf:2 (3.1) BS02 rna ? GO:0003735 ... P32411 14561884
    45706 1qvf:2 (3.1) BS03 MG ? GO:0003735 ... P32411 14561884
    45707 1qvf:A (3.1) BS01 rna ? GO:0002181 ... P20276 14561884
    45708 1qvf:A (3.1) BS02 MG ? GO:0002181 ... P20276 14561884
    45709 1qvf:B (3.1) BS01 rna ? GO:0003723 ... P20279 14561884
    45710 1qvf:C (3.1) BS01 rna ? GO:0003735 ... P12735 14561884
    45711 1qvf:D (3.1) BS01 rna ? GO:0000049 ... P14124 14561884
    45712 1qvf:D (3.1) BS02 rna ? GO:0000049 ... P14124 14561884
    45713 1qvf:E (3.1) BS01 rna ? GO:0002181 ... P14135 14561884
    45714 1qvf:F (3.1) BS01 rna ? GO:0001682 ... P12743 14561884
    45715 1qvf:H (3.1) BS01 rna ? GO:0003735 ... P60617 14561884
    45716 1qvf:I (3.1) BS01 rna ? GO:0003729 ... P29198 14561884
    45717 1qvf:J (3.1) BS01 rna ? GO:0003735 ... P22450 14561884
    45718 1qvf:K (3.1) BS01 rna ? GO:0003735 ... P12737 14561884
    45719 1qvf:L (3.1) BS01 rna ? GO:0002181 ... P60618 14561884
    45720 1qvf:M (3.1) BS01 rna ? GO:0000027 ... P14123 14561884
    45721 1qvf:M (3.1) BS02 rna ? GO:0000027 ... P14123 14561884
    45722 1qvf:N (3.1) BS01 rna ? GO:0003723 ... P12733 14561884
    45723 1qvf:O (3.1) BS01 rna ? GO:0003723 ... P14119 14561884
    45724 1qvf:P (3.1) BS01 rna ? GO:0003735 ... P12734 14561884
    45725 1qvf:P (3.1) BS02 rna ? GO:0003735 ... P12734 14561884
    45726 1qvf:Q (3.1) BS01 rna ? GO:0002181 ... P10970 14561884
    45727 1qvf:R (3.1) BS01 rna ? GO:0003735 ... P12732 14561884
    45728 1qvf:S (3.1) BS01 rna ? GO:0003723 ... P10972 14561884
    45729 1qvf:S (3.1) BS02 MG ? GO:0003723 ... P10972 14561884
    45730 1qvf:T (3.1) BS01 rna ? GO:0003735 ... P14116 14561884
    45731 1qvf:U (3.1) BS01 rna ? GO:0003735 ... P10971 14561884
    45732 1qvf:V (3.1) BS01 rna ? GO:0000463 ... P14121 14561884
    45733 1qvf:V (3.1) BS02 rna ? GO:0000463 ... P14121 14561884
    45734 1qvf:W (3.1) BS01 rna ? GO:0002181 ... P18138 14561884
    45735 1qvf:X (3.1) BS01 rna ? GO:0000166 ... P12736 14561884
    45736 1qvf:X (3.1) BS02 MG ? GO:0000166 ... P12736 14561884
    45737 1qvf:Y (3.1) BS01 rna ? GO:0003735 ... P60619 14561884
    45738 1qvf:Z (3.1) BS01 rna ? GO:0003723 ... P32410 14561884
    45739 1qvg:1 (2.9) BS01 rna ? GO:0003735 ... P22452 14561884
    45740 1qvg:2 (2.9) BS01 rna ? GO:0003735 ... P32411 14561884
    45741 1qvg:2 (2.9) BS02 rna ? GO:0003735 ... P32411 14561884
    45742 1qvg:2 (2.9) BS03 MG ? GO:0003735 ... P32411 14561884
    45743 1qvg:A (2.9) BS01 rna ? GO:0002181 ... P20276 14561884
    45744 1qvg:B (2.9) BS01 rna ? GO:0003723 ... P20279 14561884
    45745 1qvg:C (2.9) BS01 rna ? GO:0003735 ... P12735 14561884
    45746 1qvg:D (2.9) BS01 rna ? GO:0000049 ... P14124 14561884
    45747 1qvg:D (2.9) BS02 rna ? GO:0000049 ... P14124 14561884
    45748 1qvg:E (2.9) BS01 rna ? GO:0002181 ... P14135 14561884
    45749 1qvg:F (2.9) BS01 rna ? GO:0001682 ... P12743 14561884
    45750 1qvg:H (2.9) BS01 rna ? GO:0003735 ... P60617 14561884
    45751 1qvg:I (2.9) BS01 rna ? GO:0003729 ... P29198 14561884
    45752 1qvg:J (2.9) BS01 rna ? GO:0003735 ... P22450 14561884
    45753 1qvg:K (2.9) BS01 rna ? GO:0003735 ... P12737 14561884
    45754 1qvg:L (2.9) BS01 rna ? GO:0002181 ... P60618 14561884
    45755 1qvg:M (2.9) BS01 rna ? GO:0000027 ... P14123 14561884
    45756 1qvg:M (2.9) BS02 rna ? GO:0000027 ... P14123 14561884
    45757 1qvg:N (2.9) BS01 rna ? GO:0003723 ... P12733 14561884
    45758 1qvg:O (2.9) BS01 rna ? GO:0003723 ... P14119 14561884
    45759 1qvg:P (2.9) BS01 rna ? GO:0003735 ... P12734 14561884
    45760 1qvg:P (2.9) BS02 rna ? GO:0003735 ... P12734 14561884
    45761 1qvg:Q (2.9) BS01 rna ? GO:0002181 ... P10970 14561884
    45762 1qvg:R (2.9) BS01 rna ? GO:0003735 ... P12732 14561884
    45763 1qvg:S (2.9) BS01 rna ? GO:0003723 ... P10972 14561884
    45764 1qvg:S (2.9) BS02 MG ? GO:0003723 ... P10972 14561884
    45765 1qvg:T (2.9) BS01 rna ? GO:0003735 ... P14116 14561884
    45766 1qvg:U (2.9) BS01 rna ? GO:0003735 ... P10971 14561884
    45767 1qvg:V (2.9) BS01 rna ? GO:0000463 ... P14121 14561884
    45768 1qvg:V (2.9) BS02 rna ? GO:0000463 ... P14121 14561884
    45769 1qvg:W (2.9) BS01 rna ? GO:0002181 ... P18138 14561884
    45770 1qvg:X (2.9) BS01 rna ? GO:0000166 ... P12736 14561884
    45771 1qvg:X (2.9) BS02 MG ? GO:0000166 ... P12736 14561884
    45772 1qvg:Y (2.9) BS01 rna ? GO:0003735 ... P60619 14561884
    45773 1qvg:Z (2.9) BS01 rna ? GO:0003723 ... P32410 14561884
    45774 1qvi:A (2.54) BS01 MG ? GO:0003774 ... P24733 14656445
    45775 1qvi:A (2.54) BS02 ADP ? GO:0003774 ... P24733 14656445
    45776 1qvi:Y (2.54) BS01 MG ? GO:0005509 ... P13543 14656445
    45777 1qvi:Z (2.54) BS01 CA ? GO:0005509 ... P07291 14656445
    45778 1qvj:A (1.91) BS01 RP5 3.6.1.13 GO:0047631 ... Q9BW91 12948489
    45779 1qvn:A (2.7) BS01 FRI ? GO:0002366 ... P60568 17032757
    45780 1qvn:B (2.7) BS01 FRI ? GO:0002366 ... P60568 17032757
    45781 1qvn:C (2.7) BS01 FRI ? GO:0002366 ... P60568 17032757
    45782 1qvn:C (2.7) BS02 FRI ? GO:0002366 ... P60568 17032757
    45783 1qvn:D (2.7) BS01 FRI ? GO:0002366 ... P60568 17032757
    45784 1qvo:A (2.22) BS01 peptide ? N/A P04439 15128805
    45785 1qvo:D (2.22) BS01 peptide ? N/A P04439 15128805
    45786 1qvr:A (3.0) BS01 ANP ? GO:0005515 ... Q9RA63 14567920
    45787 1qvr:A (3.0) BS02 ANP ? GO:0005515 ... Q9RA63 14567920
    45788 1qvr:B (3.0) BS01 ANP ? GO:0005515 ... Q9RA63 14567920
    45789 1qvr:B (3.0) BS02 ANP ? GO:0005515 ... Q9RA63 14567920
    45790 1qvr:C (3.0) BS01 ANP ? GO:0005515 ... Q9RA63 14567920
    45791 1qvr:C (3.0) BS02 ANP ? GO:0005515 ... Q9RA63 14567920
    45792 1qvr:C (3.0) BS03 ANP ? GO:0005515 ... Q9RA63 14567920
    45793 1qvt:A (2.89) BS01 PRL ? GO:0003677 ... P0A0N4 15257299
    45794 1qvu:A (2.96) BS01 ET ? GO:0003677 ... P0A0N4 15257299
    45795 1qvu:A (2.96) BS02 PRL ? GO:0003677 ... P0A0N4 15257299
    45796 1qvu:B (2.96) BS01 ET ? GO:0003677 ... P0A0N4 15257299
    45797 1qw4:A (2.4) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 12954642
    45798 1qw4:A (2.4) BS02 H4B 1.14.13.39 GO:0004517 ... P29477 12954642
    45799 1qw4:A (2.4) BS03 3AR 1.14.13.39 GO:0004517 ... P29477 12954642
    45800 1qw4:B (2.4) BS01 ZN 1.14.13.39 GO:0004517 ... P29477 12954642

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).