SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    458801 6e48:A (1.801) BS04 CA ? N/A Q80J94 30194229
    458802 6e48:B (1.801) BS01 4OA ? N/A Q80J94 30194229
    458803 6e48:B (1.801) BS02 4OA ? N/A Q80J94 30194229
    458804 6e48:B (1.801) BS03 CA ? N/A Q80J94 30194229
    458805 6e48:B (1.801) BS04 CA ? N/A Q80J94 30194229
    458806 6e48:B (1.801) BS05 CA ? N/A Q80J94 30194229
    458807 6e48:F (1.801) BS01 CA ? N/A Q6SJQ7 30194229
    458808 6e48:G (1.801) BS01 CA ? N/A Q6SJQ7 30194229
    458809 6e49:A (2.9) BS01 peptide ? GO:0000278 ... P15873 29141206
    458810 6e49:B (2.9) BS01 peptide ? GO:0000278 ... P15873 29141206
    458811 6e49:C (2.9) BS01 peptide ? GO:0000278 ... P15873 29141206
    458812 6e4a:A (1.26) BS01 HRY ? N/A O60885 30268702 MOAD: Kd=44nM
    BindingDB: Kd=44nM
    458813 6e4a:B (1.26) BS01 HRY ? N/A O60885 30268702 MOAD: Kd=44nM
    BindingDB: Kd=44nM
    458814 6e4c:A (2.35) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 31536340
    458815 6e4c:A (2.35) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 31536340
    458816 6e4c:A (2.35) BS03 HRJ 3.1.-.- GO:0003723 ... C3W5S0 31536340
    458817 6e4d:A (1.252) BS01 peptide ? GO:0015833 ... I6X811 31534126
    458818 6e4e:A (1.9) BS01 NAP 1.5.1.3 GO:0004146 ... P0A017 N/A
    458819 6e4e:A (1.9) BS02 MMV 1.5.1.3 GO:0004146 ... P0A017 N/A
    458820 6e4f:A (1.15) BS01 HRA 2.7.10.2 GO:0004672 ... Q06187 30093506 MOAD: ic50=0.85nM
    BindingDB: IC50=0.850nM
    458821 6e4l:A (1.6) BS01 HRS ? GO:0005198 ... Q00610 31011214
    458822 6e4p:B (1.949) BS01 rna ? GO:0003676 ... Q389P7 30544166
    458823 6e4p:C (1.949) BS01 rna ? GO:0003676 ... Q389P7 30544166
    458824 6e4p:I (1.949) BS01 rna ? GO:0003676 ... Q389P7 30544166
    458825 6e4q:A (2.799) BS01 MN 2.4.1.41 N/A Q8MRC9 30158631
    458826 6e4q:A (2.799) BS02 UDP 2.4.1.41 N/A Q8MRC9 30158631
    458827 6e4q:B (2.799) BS01 MN 2.4.1.41 N/A Q8MRC9 30158631
    458828 6e4q:B (2.799) BS02 UDP 2.4.1.41 N/A Q8MRC9 30158631
    458829 6e4q:C (2.799) BS01 MN 2.4.1.41 N/A Q8MRC9 30158631
    458830 6e4q:C (2.799) BS02 UDP 2.4.1.41 N/A Q8MRC9 30158631
    458831 6e4q:D (2.799) BS01 MN 2.4.1.41 N/A Q8MRC9 30158631
    458832 6e4q:D (2.799) BS02 UDP 2.4.1.41 N/A Q8MRC9 30158631
    458833 6e4t:A (3.4) BS01 HTV 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54645 30036059
    458834 6e4t:A (3.4) BS02 STU 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54645 30036059
    458835 6e4t:B (3.4) BS01 HTV ? N/A P80386 30036059
    458836 6e4t:C (3.4) BS01 AMP ? GO:0004679 ... P80385 30036059
    458837 6e4t:C (3.4) BS02 AMP ? GO:0004679 ... P80385 30036059
    458838 6e4t:C (3.4) BS03 ADP ? GO:0004679 ... P80385 30036059
    458839 6e4u:A (3.27) BS01 STU 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54645 30036059
    458840 6e4u:A (3.27) BS02 HU7 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54645 30036059
    458841 6e4u:B (3.27) BS01 HU7 ? N/A P80386 30036059
    458842 6e4u:C (3.27) BS01 AMP ? GO:0004679 ... P80385 30036059
    458843 6e4u:C (3.27) BS02 AMP ? GO:0004679 ... P80385 30036059
    458844 6e4u:C (3.27) BS03 ADP ? GO:0004679 ... P80385 30036059
    458845 6e4v:A (2.0) BS01 HWS ? GO:0006826 ... P16869 31098021
    458846 6e4w:A (3.35) BS01 STU 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54645 30036059
    458847 6e4w:A (3.35) BS02 HUG 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54645 30036059
    458848 6e4w:B (3.35) BS01 HUG ? N/A P80386 30036059
    458849 6e4w:C (3.35) BS01 AMP ? GO:0004679 ... P80385 30036059
    458850 6e4w:C (3.35) BS02 AMP ? GO:0004679 ... P80385 30036059
    458851 6e4w:C (3.35) BS03 ADP ? GO:0004679 ... P80385 30036059
    458852 6e4y:H (2.24) BS01 peptide N/A N/A N/A 30653992
    458853 6e4y:L (2.24) BS01 peptide ? N/A A0A097PUG4 30653992
    458854 6e4y:L (2.24) BS02 ZN ? N/A A0A097PUG4 30653992
    458855 6e4z:H (2.202) BS01 peptide N/A N/A N/A 30653992
    458856 6e4z:L (2.202) BS01 peptide ? N/A A0A097PUG4 30653992
    458857 6e4z:L (2.202) BS02 ZN ? N/A A0A097PUG4 30653992
    458858 6e4z:L (2.202) BS03 ZN ? N/A A0A097PUG4 30653992
    458859 6e4z:L (2.202) BS04 SO4 ? N/A A0A097PUG4 30653992
    458860 6e53:A (2.8) BS01 dna 2.7.7.49 GO:0000723 ... Q0QHL8 30951520
    458861 6e53:A (2.8) BS02 MG 2.7.7.49 GO:0000723 ... Q0QHL8 30951520
    458862 6e53:A (2.8) BS03 MG 2.7.7.49 GO:0000723 ... Q0QHL8 30951520
    458863 6e53:A (2.8) BS04 HUV 2.7.7.49 GO:0000723 ... Q0QHL8 30951520
    458864 6e54:A (1.65) BS01 HUM 3.5.1.108 GO:0006796 ... P47205 N/A
    458865 6e54:A (1.65) BS02 JCG 3.5.1.108 GO:0006796 ... P47205 N/A
    458866 6e54:A (1.65) BS03 ZN 3.5.1.108 GO:0006796 ... P47205 N/A
    458867 6e58:A (2.75) BS01 CA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    458868 6e58:B (2.75) BS01 CA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    458869 6e59:A (3.4) BS01 L76 ? GO:0004930 ... P25103
    Q9V2J8
    30538204
    458870 6e5a:A (2.4) BS01 HV4 ? GO:0003677 ... P37231 30818268
    458871 6e5a:B (2.4) BS01 HV4 ? GO:0003677 ... P37231 30818268
    458872 6e5b:K (2.77) BS01 HUJ 3.4.25.1 GO:0000502 ... P28062 31283222
    458873 6e5b:N (2.77) BS01 HUJ 3.4.25.1 GO:0000502 ... P28065 31283222
    458874 6e5b:Y (2.77) BS01 HUJ 3.4.25.1 GO:0000502 ... P28062 31283222
    458875 6e5b:b (2.77) BS01 HUJ 3.4.25.1 GO:0000502 ... P28065 31283222
    458876 6e5f:A (1.37) BS01 L6T ? N/A O53780 31471317
    458877 6e5g:A (2.43) BS01 HUY ? N/A Q15562 30581134
    458878 6e5g:B (2.43) BS01 HUY ? N/A Q15562 30581134
    458879 6e5l:A (1.17) BS01 HVD ? GO:0002138 ... P09455 30721022 MOAD: Ki=76.3nM
    458880 6e5m:A (1.612) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 30817908
    458881 6e5m:A (1.612) BS02 CA 3.4.21.4 GO:0004175 ... P00760 30817908
    458882 6e5n:B (-1.00) BS01 peptide ? N/A Q9UM54 31672988
    458883 6e5p:2 (8.8) BS01 MAN N/A N/A N/A 30471922
    458884 6e5p:2 (8.8) BS02 MAN N/A N/A N/A 30471922
    458885 6e5p:3 (8.8) BS01 MAN N/A N/A N/A 30471922
    458886 6e5p:3 (8.8) BS02 MAN N/A N/A N/A 30471922
    458887 6e5p:3 (8.8) BS03 MAN N/A N/A N/A 30471922
    458888 6e5p:H (8.8) BS01 MAN N/A N/A N/A 30471922
    458889 6e5p:H (8.8) BS02 MAN N/A N/A N/A 30471922
    458890 6e5p:H (8.8) BS03 MAN N/A N/A N/A 30471922
    458891 6e5p:M (8.8) BS01 MAN N/A N/A N/A 30471922
    458892 6e5p:M (8.8) BS02 MAN N/A N/A N/A 30471922
    458893 6e5p:R (8.8) BS01 MAN N/A N/A N/A 30471922
    458894 6e5p:R (8.8) BS02 MAN N/A N/A N/A 30471922
    458895 6e5p:S (8.8) BS01 MAN N/A N/A N/A 30471922
    458896 6e5p:S (8.8) BS02 MAN N/A N/A N/A 30471922
    458897 6e5p:S (8.8) BS03 MAN N/A N/A N/A 30471922
    458898 6e5s:A (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458899 6e5s:B (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458900 6e5s:C (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458901 6e5s:D (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458902 6e5s:E (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458903 6e5s:F (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458904 6e5s:G (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458905 6e5s:G (2.061) BS02 RET ? GO:0001523 ... P50120 31557439
    458906 6e5s:H (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458907 6e5s:I (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458908 6e5s:I (2.061) BS02 RET ? GO:0001523 ... P50120 31557439
    458909 6e5s:J (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458910 6e5s:K (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458911 6e5s:L (2.061) BS01 RET ? GO:0001523 ... P50120 31557439
    458912 6e5t:A (1.55) BS01 HVJ ? GO:0002138 ... P09455 30721022 MOAD: Ki=236.3nM
    458913 6e5v:A (2.95) BS01 HVG ? GO:0004930 ... O00222 30365309 BindingDB: EC50=31nM
    458914 6e5v:B (2.95) BS01 HVG ? GO:0004930 ... O00222 30365309 BindingDB: EC50=31nM
    458915 6e5w:A (2.5) BS01 HVD ? GO:0005501 ... P82980 30721022
    458916 6e5w:B (2.5) BS01 HVD ? GO:0005501 ... P82980 30721022
    458917 6e5w:C (2.5) BS01 HVD ? GO:0005501 ... P82980 30721022
    458918 6e5w:D (2.5) BS01 HVD ? GO:0005501 ... P82980 30721022
    458919 6e5x:A (1.5) BS01 peptide ? GO:0003723 ... Q77DJ5 30550789
    458920 6e5x:A (1.5) BS02 CA ? GO:0003723 ... Q77DJ5 30550789
    458921 6e5y:A (1.5) BS01 AMP 6.3.4.5 GO:0000050 ... Q7VTJ9 N/A
    458922 6e60:A (1.5) BS01 MG N/A N/A N/A 31062073
    458923 6e61:A (2.51) BS01 BGC N/A N/A N/A 31062073
    458924 6e61:A (2.51) BS02 BGC N/A N/A N/A 31062073
    458925 6e61:A (2.51) BS03 BGC N/A N/A N/A 31062073
    458926 6e61:A (2.51) BS04 MG N/A N/A N/A 31062073
    458927 6e61:B (2.51) BS01 BGC N/A N/A N/A 31062073
    458928 6e61:B (2.51) BS02 BGC N/A N/A N/A 31062073
    458929 6e61:B (2.51) BS03 BGC N/A N/A N/A 31062073
    458930 6e61:B (2.51) BS04 MG N/A N/A N/A 31062073
    458931 6e67:A (3.7) BS01 P0G 3.2.1.17 GO:0003796 ... A0A097J809
    P07550
    P63092
    31080070
    458932 6e67:B (3.7) BS01 P0G 3.2.1.17 GO:0003796 ... A0A097J809
    P07550
    P63092
    31080070
    458933 6e68:A (1.5) BS01 HVM 2.4.2.12 GO:0005125 ... P43490 N/A
    458934 6e68:B (1.5) BS01 HVM 2.4.2.12 GO:0005125 ... P43490 N/A
    458935 6e69:A (2.33) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 31484779
    458936 6e69:A (2.33) BS02 HVP 3.4.21.37 GO:0000122 ... P08246 31484779
    458937 6e69:B (2.33) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 31484779
    458938 6e69:B (2.33) BS02 HVP 3.4.21.37 GO:0000122 ... P08246 31484779
    458939 6e69:C (2.33) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 31484779
    458940 6e69:C (2.33) BS02 HVP 3.4.21.37 GO:0000122 ... P08246 31484779
    458941 6e69:D (2.33) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 31484779
    458942 6e69:D (2.33) BS02 HVP 3.4.21.37 GO:0000122 ... P08246 31484779
    458943 6e6b:A (4.52) BS01 CA ? GO:0005509 ... Q91XX6 30971825
    458944 6e6b:A (4.52) BS02 CA ? GO:0005509 ... Q91XX6 30971825
    458945 6e6b:A (4.52) BS03 CA ? GO:0005509 ... Q91XX6 30971825
    458946 6e6b:A (4.52) BS04 CA ? GO:0005509 ... Q91XX6 30971825
    458947 6e6b:A (4.52) BS05 CA ? GO:0005509 ... Q91XX6 30971825
    458948 6e6b:A (4.52) BS06 CA ? GO:0005509 ... Q91XX6 30971825
    458949 6e6b:A (4.52) BS07 CA ? GO:0005509 ... Q91XX6 30971825
    458950 6e6b:A (4.52) BS08 CA ? GO:0005509 ... Q91XX6 30971825
    458951 6e6b:A (4.52) BS09 CA ? GO:0005509 ... Q91XX6 30971825
    458952 6e6b:A (4.52) BS10 CA ? GO:0005509 ... Q91XX6 30971825
    458953 6e6b:A (4.52) BS11 CA ? GO:0005509 ... Q91XX6 30971825
    458954 6e6b:A (4.52) BS12 CA ? GO:0005509 ... Q91XX6 30971825
    458955 6e6b:A (4.52) BS13 CA ? GO:0005509 ... Q91XX6 30971825
    458956 6e6b:A (4.52) BS14 CA ? GO:0005509 ... Q91XX6 30971825
    458957 6e6b:A (4.52) BS15 CA ? GO:0005509 ... Q91XX6 30971825
    458958 6e6b:A (4.52) BS16 MAN ? GO:0005509 ... Q91XX6 30971825
    458959 6e6b:A (4.52) BS17 MAN ? GO:0005509 ... Q91XX6 30971825
    458960 6e6b:B (4.52) BS01 CA ? GO:0005509 ... Q91XX6 30971825
    458961 6e6b:B (4.52) BS02 CA ? GO:0005509 ... Q91XX6 30971825
    458962 6e6b:B (4.52) BS03 CA ? GO:0005509 ... Q91XX6 30971825
    458963 6e6b:B (4.52) BS04 CA ? GO:0005509 ... Q91XX6 30971825
    458964 6e6b:B (4.52) BS05 CA ? GO:0005509 ... Q91XX6 30971825
    458965 6e6b:B (4.52) BS06 CA ? GO:0005509 ... Q91XX6 30971825
    458966 6e6b:B (4.52) BS07 CA ? GO:0005509 ... Q91XX6 30971825
    458967 6e6b:B (4.52) BS08 CA ? GO:0005509 ... Q91XX6 30971825
    458968 6e6b:B (4.52) BS09 CA ? GO:0005509 ... Q91XX6 30971825
    458969 6e6b:B (4.52) BS10 CA ? GO:0005509 ... Q91XX6 30971825
    458970 6e6b:B (4.52) BS11 CA ? GO:0005509 ... Q91XX6 30971825
    458971 6e6b:B (4.52) BS12 CA ? GO:0005509 ... Q91XX6 30971825
    458972 6e6b:B (4.52) BS13 CA ? GO:0005509 ... Q91XX6 30971825
    458973 6e6b:B (4.52) BS14 CA ? GO:0005509 ... Q91XX6 30971825
    458974 6e6b:B (4.52) BS15 CA ? GO:0005509 ... Q91XX6 30971825
    458975 6e6c:A (1.9) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 31390567
    458976 6e6c:A (1.9) BS02 CA 3.6.5.2 GO:0003924 ... P01112 31390567
    458977 6e6e:A (2.15) BS01 HVY 2.7.10.2 GO:0004672 ... P12931 32509799 BindingDB: IC50=3.0nM
    458978 6e6e:B (2.15) BS01 HVY 2.7.10.2 GO:0004672 ... P12931 32509799 BindingDB: IC50=3.0nM
    458979 6e6e:C (2.15) BS01 HVY 2.7.10.2 GO:0004672 ... P12931 32509799 BindingDB: IC50=3.0nM
    458980 6e6e:D (2.15) BS01 HVY 2.7.10.2 GO:0004672 ... P12931 32509799 BindingDB: IC50=3.0nM
    458981 6e6e:E (2.15) BS01 HVY 2.7.10.2 GO:0004672 ... P12931 32509799 BindingDB: IC50=3.0nM
    458982 6e6e:F (2.15) BS01 HVY 2.7.10.2 GO:0004672 ... P12931 32509799 BindingDB: IC50=3.0nM
    458983 6e6e:G (2.15) BS01 HVY 2.7.10.2 GO:0004672 ... P12931 32509799 BindingDB: IC50=3.0nM
    458984 6e6e:H (2.15) BS01 HVY 2.7.10.2 GO:0004672 ... P12931 32509799 BindingDB: IC50=3.0nM
    458985 6e6f:A (3.401) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 31390567
    458986 6e6f:B (3.401) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 31390567
    458987 6e6g:A (1.93) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 31390567
    458988 6e6g:A (1.93) BS02 CA 3.6.5.2 GO:0003924 ... P01116 31390567
    458989 6e6h:A (1.99) BS01 GNP 3.6.5.2 GO:0003924 ... P01111 31390567
    458990 6e6i:A (2.4) BS01 ZN ? GO:0005737 ... G2IN02 N/A
    458991 6e6i:A (2.4) BS02 HVS ? GO:0005737 ... G2IN02 N/A
    458992 6e6i:B (2.4) BS01 ZN ? GO:0005737 ... G2IN02 N/A
    458993 6e6i:B (2.4) BS02 HVS ? GO:0005737 ... G2IN02 N/A
    458994 6e6i:C (2.4) BS01 ZN ? GO:0005737 ... G2IN02 N/A
    458995 6e6i:C (2.4) BS02 HVS ? GO:0005737 ... G2IN02 N/A
    458996 6e6i:D (2.4) BS01 ZN ? GO:0005737 ... G2IN02 N/A
    458997 6e6i:D (2.4) BS02 HVS ? GO:0005737 ... G2IN02 N/A
    458998 6e6i:E (2.4) BS01 ZN ? GO:0005737 ... G2IN02 N/A
    458999 6e6i:E (2.4) BS02 HVS ? GO:0005737 ... G2IN02 N/A
    459000 6e6i:F (2.4) BS01 ZN ? GO:0005737 ... G2IN02 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).