SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    46401 1r4v:A (1.9) BS01 ZN ? GO:0046982 ... O66665 16287087
    46402 1r4v:A (1.9) BS02 ZN ? GO:0046982 ... O66665 16287087
    46403 1r4w:A (2.5) BS01 GSH 2.5.1.18 GO:0001889 ... P24473 14717589 MOAD: Kd=90uM
    46404 1r4w:B (2.5) BS01 GSH 2.5.1.18 GO:0001889 ... P24473 14717589 MOAD: Kd=90uM
    46405 1r4w:C (2.5) BS01 GSH 2.5.1.18 GO:0001889 ... P24473 14717589 MOAD: Kd=90uM
    46406 1r4w:C (2.5) BS02 GSH 2.5.1.18 GO:0001889 ... P24473 14717589 MOAD: Kd=90uM
    46407 1r4w:D (2.5) BS01 GSH 2.5.1.18 GO:0001889 ... P24473 14717589 MOAD: Kd=90uM
    46408 1r4w:D (2.5) BS02 GSH 2.5.1.18 GO:0001889 ... P24473 14717589 MOAD: Kd=90uM
    46409 1r4z:A (1.8) BS01 RIL 3.1.1.3 GO:0004806 ... P37957 16342303
    46410 1r4z:B (1.8) BS01 RIL 3.1.1.3 GO:0004806 ... P37957 16342303
    46411 1r50:A (1.45) BS01 SIL 3.1.1.3 GO:0004806 ... P37957 16342303
    46412 1r50:B (1.45) BS01 SIL 3.1.1.3 GO:0004806 ... P37957 16342303
    46413 1r51:A (1.75) BS01 AZA 1.7.3.3 GO:0004846 ... Q00511 14993669
    46414 1r54:A (1.85) BS01 ZN 3.4.24.- GO:0004222 ... Q9BZ11 14659745
    46415 1r54:A (1.85) BS02 CA 3.4.24.- GO:0004222 ... Q9BZ11 14659745
    46416 1r55:A (1.58) BS01 ZN 3.4.24.- GO:0004222 ... Q9BZ11 14659745
    46417 1r55:A (1.58) BS02 CA 3.4.24.- GO:0004222 ... Q9BZ11 14659745
    46418 1r55:A (1.58) BS03 097 3.4.24.- GO:0004222 ... Q9BZ11 14659745
    46419 1r58:A (1.9) BS01 MN 3.4.11.18 GO:0006508 ... P50579 15012983
    46420 1r58:A (1.9) BS02 MN 3.4.11.18 GO:0006508 ... P50579 15012983
    46421 1r58:A (1.9) BS03 AO5 3.4.11.18 GO:0006508 ... P50579 15012983 BindingDB: IC50=110nM
    46422 1r5a:A (2.5) BS01 CU 2.5.1.18 GO:0003824 ... Q9GQG7 15717864
    46423 1r5a:A (2.5) BS02 GTS 2.5.1.18 GO:0003824 ... Q9GQG7 15717864
    46424 1r5c:A (2.1) BS01 CPA 4.6.1.18 GO:0003676 ... P00669 15048772
    46425 1r5c:B (2.1) BS01 CPA 4.6.1.18 GO:0003676 ... P00669 15048772
    46426 1r5g:A (2.0) BS01 MN 3.4.11.18 GO:0006508 ... P50579 15012983
    46427 1r5g:A (2.0) BS02 MN 3.4.11.18 GO:0006508 ... P50579 15012983
    46428 1r5g:A (2.0) BS03 AO1 3.4.11.18 GO:0006508 ... P50579 15012983 BindingDB: IC50=22nM
    46429 1r5h:A (2.4) BS01 MN 3.4.11.18 GO:0006508 ... P50579 15012983
    46430 1r5h:A (2.4) BS02 MN 3.4.11.18 GO:0006508 ... P50579 15012983
    46431 1r5h:A (2.4) BS03 AO2 3.4.11.18 GO:0006508 ... P50579 15012983 MOAD: ic50=0.17uM
    BindingDB: IC50=170nM
    46432 1r5i:A (2.6) BS01 peptide ? GO:0006955 ... P01903 14962388
    46433 1r5i:B (2.6) BS01 peptide ? GO:0006955 ... P01911 14962388
    46434 1r5i:D (2.6) BS01 peptide ? N/A Q48898 14962388
    46435 1r5i:E (2.6) BS01 peptide ? GO:0006955 ... P01903 14962388
    46436 1r5i:F (2.6) BS01 peptide ? GO:0006955 ... P01911 14962388
    46437 1r5i:H (2.6) BS01 peptide ? N/A Q48898 14962388
    46438 1r5k:A (2.7) BS01 GW5 ? N/A P03372 15893725 BindingDB: EC50=390nM, IC50=>1270nM
    46439 1r5k:B (2.7) BS01 GW5 ? N/A P03372 15893725 BindingDB: EC50=390nM, IC50=>1270nM
    46440 1r5k:C (2.7) BS01 GW5 ? N/A P03372 15893725 BindingDB: EC50=390nM, IC50=>1270nM
    46441 1r5l:A (1.5) BS01 VIV ? GO:0005515 ... P49638 14657365 BindingDB: Kd=2.4nM
    46442 1r5n:A (2.9) BS01 GDP 3.6.5.- GO:0000288 ... O74718 15099522
    46443 1r5o:A (3.2) BS01 GNP 3.6.5.- GO:0000288 ... O74718 15099522
    46444 1r5t:A (2.0) BS01 ZN 3.5.4.5 GO:0004126 ... Q06549 15148397
    46445 1r5t:B (2.0) BS01 ZN 3.5.4.5 GO:0004126 ... Q06549 15148397
    46446 1r5t:C (2.0) BS01 ZN 3.5.4.5 GO:0004126 ... Q06549 15148397
    46447 1r5t:D (2.0) BS01 ZN 3.5.4.5 GO:0004126 ... Q06549 15148397
    46448 1r5u:A (4.5) BS01 ZN 2.7.7.6 GO:0001172 ... P04050 14963322
    46449 1r5u:A (4.5) BS02 MG 2.7.7.6 GO:0001172 ... P04050 14963322
    46450 1r5u:B (4.5) BS01 ZN 2.7.7.6 GO:0001172 ... P08518 14963322
    46451 1r5u:C (4.5) BS01 ZN 2.7.7.6 GO:0000428 ... P16370 14963322
    46452 1r5u:I (4.5) BS01 ZN 2.7.7.6 GO:0001172 ... P27999 14963322
    46453 1r5u:I (4.5) BS02 ZN 2.7.7.6 GO:0001172 ... P27999 14963322
    46454 1r5u:J (4.5) BS01 ZN 2.7.7.6 GO:0001172 ... P22139 14963322
    46455 1r5u:L (4.5) BS01 ZN 2.7.7.6 GO:0001172 ... P40422 14963322
    46456 1r5v:A (2.5) BS01 peptide ? GO:0006955 ... P04224 14690592
    46457 1r5v:B (2.5) BS01 peptide ? GO:0006955 ... P18468 14690592
    46458 1r5v:C (2.5) BS01 peptide ? GO:0006955 ... P04224 14690592
    46459 1r5v:D (2.5) BS01 peptide ? GO:0006955 ... P18468 14690592
    46460 1r5w:A (2.9) BS01 peptide ? GO:0006955 ... P04224 14690592
    46461 1r5w:A (2.9) BS02 peptide ? GO:0006955 ... P04224 14690592
    46462 1r5w:B (2.9) BS01 peptide ? GO:0006955 ... Q31164 14690592
    46463 1r5w:C (2.9) BS01 peptide ? GO:0006955 ... P04224 14690592
    46464 1r5w:C (2.9) BS02 peptide ? GO:0006955 ... P04224 14690592
    46465 1r5w:D (2.9) BS01 peptide ? GO:0006955 ... Q31164 14690592
    46466 1r5x:A (2.3) BS01 ZN ? N/A O28085 14737182
    46467 1r5x:B (2.3) BS01 ZN ? N/A O28085 14737182
    46468 1r5y:A (1.2) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 15050823
    46469 1r5y:A (1.2) BS02 DQU 2.4.2.29 GO:0002099 ... P28720 15050823 MOAD: Ki=0.35uM
    46470 1r61:A (2.5) BS01 ZN ? GO:0004061 ... P84132 N/A
    46471 1r61:B (2.5) BS01 ZN ? GO:0004061 ... P84132 N/A
    46472 1r64:A (2.2) BS01 peptide 3.4.21.61 GO:0004252 ... P13134 14992578
    46473 1r64:A (2.2) BS02 CA 3.4.21.61 GO:0004252 ... P13134 14992578
    46474 1r64:A (2.2) BS03 CA 3.4.21.61 GO:0004252 ... P13134 14992578
    46475 1r64:A (2.2) BS04 CA 3.4.21.61 GO:0004252 ... P13134 14992578
    46476 1r64:A (2.2) BS05 K 3.4.21.61 GO:0004252 ... P13134 14992578
    46477 1r64:A (2.2) BS06 K 3.4.21.61 GO:0004252 ... P13134 14992578
    46478 1r64:B (2.2) BS01 peptide 3.4.21.61 GO:0004252 ... P13134 14992578
    46479 1r64:B (2.2) BS02 K 3.4.21.61 GO:0004252 ... P13134 14992578
    46480 1r64:B (2.2) BS03 CA 3.4.21.61 GO:0004252 ... P13134 14992578
    46481 1r64:B (2.2) BS04 CA 3.4.21.61 GO:0004252 ... P13134 14992578
    46482 1r64:B (2.2) BS05 CA 3.4.21.61 GO:0004252 ... P13134 14992578
    46483 1r64:B (2.2) BS06 K 3.4.21.61 GO:0004252 ... P13134 14992578
    46484 1r64:B (2.2) BS07 K 3.4.21.61 GO:0004252 ... P13134 14992578
    46485 1r65:A (1.95) BS01 FE2 1.17.4.1 GO:0004748 ... P69924 14677973
    46486 1r65:A (1.95) BS02 FE2 1.17.4.1 GO:0004748 ... P69924 14677973
    46487 1r65:B (1.95) BS01 FE2 1.17.4.1 GO:0004748 ... P69924 14677973
    46488 1r65:B (1.95) BS02 FE2 1.17.4.1 GO:0004748 ... P69924 14677973
    46489 1r66:A (1.44) BS01 NAD 4.2.1.46 GO:0008460 ... Q9ZGH3 14570895
    46490 1r66:A (1.44) BS02 TYD 4.2.1.46 GO:0008460 ... Q9ZGH3 14570895
    46491 1r67:A (1.77) BS01 MG 5.3.3.2 GO:0000287 ... Q46822 16617181
    46492 1r6a:A (2.6) BS01 SAH 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P12823 15152003
    46493 1r6a:A (2.6) BS02 RVP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P12823 15152003
    46494 1r6b:X (2.25) BS01 MG ? GO:0004176 ... P0ABH9 15037248
    46495 1r6b:X (2.25) BS02 ADP ? GO:0004176 ... P0ABH9 15037248
    46496 1r6b:X (2.25) BS03 ADP ? GO:0004176 ... P0ABH9 15037248
    46497 1r6d:A (1.35) BS01 NAD 4.2.1.46 GO:0008460 ... Q9ZGH3 14570895
    46498 1r6d:A (1.35) BS02 DAU 4.2.1.46 GO:0008460 ... Q9ZGH3 14570895
    46499 1r6g:A (3.0) BS01 442 ? GO:0003677 ... P10828 15177471
    46500 1r6m:A (2.0) BS01 PO4 2.7.7.56 GO:0000049 ... P50597 14573594
    46501 1r6n:A (2.4) BS01 434 ? GO:0006275 ... P04015 14634007 MOAD: Kd=40nM
    46502 1r6n:A (2.4) BS02 434 ? GO:0006275 ... P04015 14634007 MOAD: Kd=40nM
    46503 1r6n:A (2.4) BS03 ALQ ? GO:0006275 ... P04015 14634007
    46504 1r6o:A (2.25) BS01 ZN ? N/A P0ABH9 15037248
    46505 1r6o:A (2.25) BS02 YBT ? N/A P0ABH9 15037248
    46506 1r6o:B (2.25) BS01 ZN ? N/A P0ABH9 15037248
    46507 1r6o:B (2.25) BS02 YBT ? N/A P0ABH9 15037248
    46508 1r6o:B (2.25) BS03 YBT ? N/A P0ABH9 15037248
    46509 1r6o:D (2.25) BS01 YBT ? GO:0005515 ... P0A8Q6 15037248
    46510 1r6p:A (-1.00) BS01 CA ? GO:0005509 ... Q7ZZB9 15109253
    46511 1r6q:A (2.35) BS01 YBT ? N/A P0ABH9 15037248
    46512 1r6q:B (2.35) BS01 YBT ? N/A P0ABH9 15037248
    46513 1r6q:B (2.35) BS02 YBT ? N/A P0ABH9 15037248
    46514 1r6q:D (2.35) BS01 YBT ? GO:0005515 ... P0A8Q6 15037248
    46515 1r6t:A (2.1) BS01 TYM 6.1.1.2 GO:0000166 ... P23381 14671330
    46516 1r6u:A (2.0) BS01 TYM 6.1.1.2 GO:0000166 ... P23381 17637340
    46517 1r6v:A (1.7) BS01 CA 3.4.21.- GO:0004252 ... Q93LQ6 14687574
    46518 1r6w:A (1.62) BS01 MG 4.2.1.113 GO:0000287 ... P29208 14661953
    46519 1r6w:A (1.62) BS02 164 4.2.1.113 GO:0000287 ... P29208 14661953
    46520 1r6x:A (1.4) BS01 SO4 2.7.7.4 GO:0000103 ... P08536 14983089
    46521 1r6x:A (1.4) BS02 SO4 2.7.7.4 GO:0000103 ... P08536 14983089
    46522 1r6x:A (1.4) BS03 CO 2.7.7.4 GO:0000103 ... P08536 14983089
    46523 1r6z:A (2.8) BS01 GLC ? GO:0003723 ... P0AEX9
    Q9VUQ5
    14625589
    46524 1r6z:A (2.8) BS02 GLC ? GO:0003723 ... P0AEX9
    Q9VUQ5
    14625589
    46525 1r6z:P (2.8) BS01 GLC ? GO:0003723 ... P0AEX9
    Q9VUQ5
    14625589
    46526 1r6z:P (2.8) BS02 GLC ? GO:0003723 ... P0AEX9
    Q9VUQ5
    14625589
    46527 1r6z:Z (2.8) BS01 GLC ? GO:0003723 ... P0AEX9
    Q9VUQ5
    14625589
    46528 1r6z:Z (2.8) BS02 GLC ? GO:0003723 ... P0AEX9
    Q9VUQ5
    14625589
    46529 1r71:A (2.2) BS01 dna ? GO:0003677 ... P07674 15170177
    46530 1r71:A (2.2) BS02 dna ? GO:0003677 ... P07674 15170177
    46531 1r71:A (2.2) BS03 dna ? GO:0003677 ... P07674 15170177
    46532 1r71:A (2.2) BS04 dna ? GO:0003677 ... P07674 15170177
    46533 1r71:B (2.2) BS01 dna ? GO:0003677 ... P07674 15170177
    46534 1r71:B (2.2) BS02 dna ? GO:0003677 ... P07674 15170177
    46535 1r71:B (2.2) BS03 dna ? GO:0003677 ... P07674 15170177
    46536 1r71:B (2.2) BS04 dna ? GO:0003677 ... P07674 15170177
    46537 1r71:C (2.2) BS01 dna ? GO:0003677 ... P07674 15170177
    46538 1r71:C (2.2) BS02 dna ? GO:0003677 ... P07674 15170177
    46539 1r71:C (2.2) BS03 dna ? GO:0003677 ... P07674 15170177
    46540 1r71:C (2.2) BS04 dna ? GO:0003677 ... P07674 15170177
    46541 1r71:D (2.2) BS01 dna ? GO:0003677 ... P07674 15170177
    46542 1r71:D (2.2) BS02 dna ? GO:0003677 ... P07674 15170177
    46543 1r71:D (2.2) BS03 dna ? GO:0003677 ... P07674 15170177
    46544 1r71:D (2.2) BS04 dna ? GO:0003677 ... P07674 15170177
    46545 1r78:A (2.0) BS01 FMD 2.7.11.22 GO:0000082 ... P24941 15012993 MOAD: ic50=3nM
    BindingDB: IC50=3nM
    46546 1r79:A (-1.00) BS01 ZN 2.7.1.107 GO:0004143 ... Q16760 N/A
    46547 1r79:A (-1.00) BS02 ZN 2.7.1.107 GO:0004143 ... Q16760 N/A
    46548 1r7m:A (2.25) BS01 dna 3.1.-.- GO:0004519 ... P03882 14636596
    46549 1r7m:A (2.25) BS02 dna 3.1.-.- GO:0004519 ... P03882 14636596
    46550 1r7m:A (2.25) BS03 CA 3.1.-.- GO:0004519 ... P03882 14636596
    46551 1r7m:A (2.25) BS04 CA 3.1.-.- GO:0004519 ... P03882 14636596
    46552 1r7m:B (2.25) BS01 dna 3.1.-.- GO:0004519 ... P03882 14636596
    46553 1r7m:B (2.25) BS02 dna 3.1.-.- GO:0004519 ... P03882 14636596
    46554 1r7m:B (2.25) BS03 CA 3.1.-.- GO:0004519 ... P03882 14636596
    46555 1r7m:B (2.25) BS04 CA 3.1.-.- GO:0004519 ... P03882 14636596
    46556 1r7o:A (1.85) BS01 ZN 3.2.1.78 GO:0004553 ... P49424 N/A
    46557 1r7o:A (1.85) BS02 ZN 3.2.1.78 GO:0004553 ... P49424 N/A
    46558 1r7o:A (1.85) BS03 ZN 3.2.1.78 GO:0004553 ... P49424 N/A
    46559 1r7r:A (3.6) BS01 ADP 3.6.4.6 GO:0000153 ... Q01853 14643202
    46560 1r7s:A (1.91) BS01 FES ? GO:0005515 ... P00259 15103126
    46561 1r7s:B (1.91) BS01 FES ? GO:0005515 ... P00259 15103126
    46562 1r7s:C (1.91) BS01 FES ? GO:0005515 ... P00259 15103126
    46563 1r7t:A (2.09) BS01 DLG 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46564 1r7u:A (1.61) BS01 DLG 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46565 1r7u:A (1.61) BS02 FUC 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46566 1r7v:A (2.09) BS01 AIG 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46567 1r7x:A (1.97) BS01 AIG 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46568 1r7y:A (1.75) BS01 AIG 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46569 1r7y:A (1.75) BS02 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46570 1r7y:A (1.75) BS03 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46571 1r80:A (1.65) BS01 AIG 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46572 1r80:A (1.65) BS02 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46573 1r80:A (1.65) BS03 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46574 1r81:A (1.75) BS01 AIG 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46575 1r81:A (1.75) BS02 UD2 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46576 1r82:A (1.55) BS01 AOG 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46577 1r82:A (1.55) BS02 GDU 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 12972418
    46578 1r84:A (-1.00) BS01 RET ? GO:0005216 ... P02945 12119389
    46579 1r85:A (1.45) BS01 ZN 3.2.1.8 GO:0004553 ... P40943 15277671
    46580 1r85:A (1.45) BS02 ZN 3.2.1.8 GO:0004553 ... P40943 15277671
    46581 1r85:A (1.45) BS03 ZN 3.2.1.8 GO:0004553 ... P40943 15277671
    46582 1r85:A (1.45) BS04 ZN 3.2.1.8 GO:0004553 ... P40943 15277671
    46583 1r86:A (1.8) BS01 ZN 3.2.1.8 GO:0004553 ... P40943 N/A
    46584 1r86:A (1.8) BS02 ZN 3.2.1.8 GO:0004553 ... P40943 N/A
    46585 1r86:A (1.8) BS03 ZN 3.2.1.8 GO:0004553 ... P40943 N/A
    46586 1r86:A (1.8) BS04 ZN 3.2.1.8 GO:0004553 ... P40943 N/A
    46587 1r87:A (1.67) BS01 XYP 3.2.1.8 GO:0004553 ... P40943 15277671
    46588 1r87:A (1.67) BS02 XYP 3.2.1.8 GO:0004553 ... P40943 15277671
    46589 1r87:A (1.67) BS03 XYP 3.2.1.8 GO:0004553 ... P40943 15277671
    46590 1r87:A (1.67) BS04 ZN 3.2.1.8 GO:0004553 ... P40943 15277671
    46591 1r87:A (1.67) BS05 ZN 3.2.1.8 GO:0004553 ... P40943 15277671
    46592 1r87:A (1.67) BS06 ZN 3.2.1.8 GO:0004553 ... P40943 15277671
    46593 1r87:A (1.67) BS07 ZN 3.2.1.8 GO:0004553 ... P40943 15277671
    46594 1r89:A (1.8) BS01 MN 2.7.7.72 GO:0000049 ... O28126 14636575
    46595 1r89:A (1.8) BS02 MN 2.7.7.72 GO:0000049 ... O28126 14636575
    46596 1r89:A (1.8) BS03 MG 2.7.7.72 GO:0000049 ... O28126 14636575
    46597 1r89:A (1.8) BS04 CTP 2.7.7.72 GO:0000049 ... O28126 14636575
    46598 1r89:A (1.8) BS05 CTP 2.7.7.72 GO:0000049 ... O28126 14636575
    46599 1r8a:A (2.1) BS01 MN 2.7.7.72 GO:0000049 ... O28126 14636575
    46600 1r8a:A (2.1) BS02 MN 2.7.7.72 GO:0000049 ... O28126 14636575

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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