SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    47601 1ro7:B (1.8) BS01 CSF 2.4.99.- N/A Q9LAK3 14730352
    47602 1ro7:C (1.8) BS01 CSF 2.4.99.- N/A Q9LAK3 14730352 MOAD: Ki=657uM
    47603 1ro7:D (1.8) BS01 CSF 2.4.99.- N/A Q9LAK3 14730352
    47604 1ro8:A (2.05) BS01 C5P 2.4.99.- N/A Q9LAK3 14730352
    47605 1ro8:B (2.05) BS01 C5P 2.4.99.- N/A Q9LAK3 14730352
    47606 1ro9:A (2.13) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15003452
    47607 1ro9:A (2.13) BS02 8BR 3.1.4.53 GO:0004114 ... Q07343 15003452
    47608 1ro9:B (2.13) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15003452
    47609 1ro9:B (2.13) BS02 8BR 3.1.4.53 GO:0004114 ... Q07343 15003452
    47610 1rob:A (1.6) BS01 C2P 4.6.1.18 GO:0003676 ... P61823 15299491 BindingDB: Ki=7000nM
    47611 1roe:A (-1.00) BS01 FES ? GO:0005515 ... P0A3C9 8841126
    47612 1rof:A (-1.00) BS01 SF4 ? GO:0005506 ... P46797 8647119
    47613 1rom:A (2.0) BS01 HEM 1.7.1.14 GO:0004497 ... P23295 9334748
    47614 1ror:A (2.0) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15003452
    47615 1ror:A (2.0) BS02 AMP 3.1.4.53 GO:0004114 ... Q07343 15003452
    47616 1ror:B (2.0) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15003452
    47617 1ror:B (2.0) BS02 AMP 3.1.4.53 GO:0004114 ... Q07343 15003452
    47618 1ros:A (2.0) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 15289103
    47619 1ros:A (2.0) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 15289103
    47620 1ros:A (2.0) BS03 CA 3.4.24.65 GO:0004222 ... P39900 15289103
    47621 1ros:A (2.0) BS04 CA 3.4.24.65 GO:0004222 ... P39900 15289103
    47622 1ros:A (2.0) BS05 CA 3.4.24.65 GO:0004222 ... P39900 15289103
    47623 1ros:A (2.0) BS06 DEO 3.4.24.65 GO:0004222 ... P39900 15289103 MOAD: ic50=0.0017uM
    47624 1ros:B (2.0) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 15289103
    47625 1ros:B (2.0) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 15289103
    47626 1ros:B (2.0) BS03 CA 3.4.24.65 GO:0004222 ... P39900 15289103
    47627 1ros:B (2.0) BS04 CA 3.4.24.65 GO:0004222 ... P39900 15289103
    47628 1ros:B (2.0) BS05 CA 3.4.24.65 GO:0004222 ... P39900 15289103
    47629 1ros:B (2.0) BS06 DEO 3.4.24.65 GO:0004222 ... P39900 15289103 MOAD: ic50=0.0017uM
    47630 1rov:A (2.0) BS01 FE 1.13.11.58 GO:0005506 ... P09186 14971933
    47631 1roz:A (2.21) BS01 NAD 2.5.1.46 GO:0005515 ... P49366 15100216
    47632 1roz:B (2.21) BS01 NAD 2.5.1.46 GO:0005515 ... P49366 15100216
    47633 1rp0:A (1.6) BS01 ZN 2.4.2.60 GO:0009228 ... Q38814 16912043
    47634 1rp0:A (1.6) BS02 AHZ 2.4.2.60 GO:0009228 ... Q38814 16912043
    47635 1rp0:B (1.6) BS01 ZN 2.4.2.60 GO:0009228 ... Q38814 16912043
    47636 1rp0:B (1.6) BS02 AHZ 2.4.2.60 GO:0009228 ... Q38814 16912043
    47637 1rp1:A (2.1) BS01 CA 3.1.1.3 GO:0004806 ... P06857 9726421
    47638 1rp4:A (2.2) BS01 FAD 1.8.4.- GO:0005783 ... Q03103 15163408
    47639 1rp7:A (2.09) BS01 MG 1.2.4.1 GO:0000287 ... P0AFG8 14992577
    47640 1rp7:A (2.09) BS02 TZD 1.2.4.1 GO:0000287 ... P0AFG8 14992577 MOAD: Ki>0.003uM
    47641 1rp7:A (2.09) BS03 TZD 1.2.4.1 GO:0000287 ... P0AFG8 14992577 MOAD: Ki>0.003uM
    47642 1rp7:B (2.09) BS01 TZD 1.2.4.1 GO:0000287 ... P0AFG8 14992577 MOAD: Ki>0.003uM
    47643 1rp7:B (2.09) BS02 MG 1.2.4.1 GO:0000287 ... P0AFG8 14992577
    47644 1rp7:B (2.09) BS03 TZD 1.2.4.1 GO:0000287 ... P0AFG8 14992577 MOAD: Ki>0.003uM
    47645 1rp8:A (2.0) BS01 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47646 1rp8:A (2.0) BS02 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47647 1rp8:A (2.0) BS03 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47648 1rp8:A (2.0) BS04 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47649 1rp8:A (2.0) BS05 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47650 1rp8:A (2.0) BS06 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47651 1rp8:A (2.0) BS07 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47652 1rp8:A (2.0) BS08 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47653 1rp8:A (2.0) BS09 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47654 1rp8:A (2.0) BS10 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47655 1rp8:A (2.0) BS11 CA 3.2.1.1 GO:0004556 ... P00693 16030022
    47656 1rp8:A (2.0) BS12 CA 3.2.1.1 GO:0004556 ... P00693 16030022
    47657 1rp8:A (2.0) BS13 CA 3.2.1.1 GO:0004556 ... P00693 16030022
    47658 1rp9:A (2.0) BS01 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47659 1rp9:A (2.0) BS02 BGC 3.2.1.1 GO:0004556 ... P00693 16030022
    47660 1rp9:A (2.0) BS03 DAF 3.2.1.1 GO:0004556 ... P00693 16030022
    47661 1rp9:A (2.0) BS04 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47662 1rp9:A (2.0) BS05 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47663 1rp9:A (2.0) BS06 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47664 1rp9:A (2.0) BS07 DAF 3.2.1.1 GO:0004556 ... P00693 16030022
    47665 1rp9:A (2.0) BS08 CA 3.2.1.1 GO:0004556 ... P00693 16030022
    47666 1rp9:A (2.0) BS09 CA 3.2.1.1 GO:0004556 ... P00693 16030022
    47667 1rp9:A (2.0) BS10 CA 3.2.1.1 GO:0004556 ... P00693 16030022
    47668 1rpe:L (2.5) BS01 dna ? GO:0003677 ... P16117 8355273
    47669 1rpe:L (2.5) BS02 dna ? GO:0003677 ... P16117 8355273
    47670 1rpe:R (2.5) BS01 dna ? GO:0003677 ... P16117 8355273
    47671 1rpe:R (2.5) BS02 dna ? GO:0003677 ... P16117 8355273
    47672 1rpf:A (2.2) BS01 C3P 4.6.1.18 GO:0003676 ... P61823 7756988 BindingDB: Ki=103000nM
    47673 1rpg:A (1.4) BS01 CPA 4.6.1.18 GO:0003676 ... P61823 7756988
    47674 1rpi:A (1.86) BS01 GLC 3.4.23.16 GO:0004190 ... Q9QM22 14990731
    47675 1rpj:A (1.8) BS01 ALL ? GO:0015752 ... P39265 10064713 MOAD: Kd=0.33uM
    47676 1rpk:A (2.0) BS01 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47677 1rpk:A (2.0) BS02 DAF 3.2.1.1 GO:0004556 ... P00693 16030022
    47678 1rpk:A (2.0) BS03 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47679 1rpk:A (2.0) BS04 DAF 3.2.1.1 GO:0004556 ... P00693 16030022
    47680 1rpk:A (2.0) BS05 GLC 3.2.1.1 GO:0004556 ... P00693 16030022
    47681 1rpk:A (2.0) BS06 DAF 3.2.1.1 GO:0004556 ... P00693 16030022
    47682 1rpk:A (2.0) BS07 CA 3.2.1.1 GO:0004556 ... P00693 16030022
    47683 1rpk:A (2.0) BS08 CA 3.2.1.1 GO:0004556 ... P00693 16030022
    47684 1rpk:A (2.0) BS09 CA 3.2.1.1 GO:0004556 ... P00693 16030022
    47685 1rpn:A (2.15) BS01 NDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47686 1rpn:A (2.15) BS02 GDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47687 1rpn:A (2.15) BS03 NDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47688 1rpn:B (2.15) BS01 NDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47689 1rpn:B (2.15) BS02 GDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47690 1rpn:B (2.15) BS03 NDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47691 1rpn:C (2.15) BS01 NDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47692 1rpn:C (2.15) BS02 NDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47693 1rpn:C (2.15) BS03 GDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47694 1rpn:D (2.15) BS01 NDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47695 1rpn:D (2.15) BS02 NDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47696 1rpn:D (2.15) BS03 GDP 4.2.1.47 GO:0008446 ... Q51366 14739333
    47697 1rpq:A (3.0) BS01 peptide ? N/A P12319 15242605
    47698 1rpq:B (3.0) BS01 peptide ? N/A P12319 15242605
    47699 1rpq:C (3.0) BS01 peptide ? N/A P12319 15242605
    47700 1rpq:D (3.0) BS01 peptide ? N/A P12319 15242605
    47701 1rpq:D (3.0) BS02 peptide ? N/A P12319 15242605
    47702 1rps:A (2.11) BS01 HEM ? GO:0004601 ... P69905 14705937
    47703 1rps:A (2.11) BS02 NO ? GO:0004601 ... P69905 14705937
    47704 1rps:B (2.11) BS01 HEM ? GO:0004601 ... P68871 14705937
    47705 1rps:B (2.11) BS02 NO ? GO:0004601 ... P68871 14705937
    47706 1rps:C (2.11) BS01 HEM ? GO:0004601 ... P69905 14705937
    47707 1rps:D (2.11) BS01 HEM ? GO:0004601 ... P68871 14705937
    47708 1rps:D (2.11) BS02 NO ? GO:0004601 ... P68871 14705937
    47709 1rpt:A (3.0) BS01 VO4 3.1.3.2
    3.1.3.48
    3.1.3.5
    GO:0003993 ... P20646 8168503
    47710 1rpu:A (2.5) BS01 rna ? GO:0003723 ... Q66104 14697199
    47711 1rpu:A (2.5) BS02 rna ? GO:0003723 ... Q66104 14697199
    47712 1rpu:B (2.5) BS01 rna ? GO:0003723 ... Q66104 14697199
    47713 1rpu:B (2.5) BS02 rna ? GO:0003723 ... Q66104 14697199
    47714 1rpw:B (2.9) BS01 DID ? GO:0003677 ... P0A0N4 14726520
    47715 1rpx:A (2.3) BS01 SO4 5.1.3.1 GO:0004750 ... Q43843 10191144
    47716 1rpx:B (2.3) BS01 SO4 5.1.3.1 GO:0004750 ... Q43843 10191144
    47717 1rpx:C (2.3) BS01 SO4 5.1.3.1 GO:0004750 ... Q43843 10191144
    47718 1rpz:A (2.9) BS01 dna 2.7.1.78
    3.1.3.34
    GO:0000166 ... P06855 14754987
    47719 1rpz:A (2.9) BS02 CA 2.7.1.78
    3.1.3.34
    GO:0000166 ... P06855 14754987
    47720 1rpz:A (2.9) BS03 ADP 2.7.1.78
    3.1.3.34
    GO:0000166 ... P06855 14754987
    47721 1rq1:A (2.8) BS01 NEN 1.8.4.- GO:0005783 ... Q03103 15163408
    47722 1rq1:A (2.8) BS02 FAD 1.8.4.- GO:0005783 ... Q03103 15163408
    47723 1rq3:A (1.91) BS01 HEM ? GO:0004601 ... P69905 14705937
    47724 1rq3:B (1.91) BS01 HEM ? GO:0004601 ... P68871 14705937
    47725 1rq3:C (1.91) BS01 HEM ? GO:0004601 ... P69905 14705937
    47726 1rq3:D (1.91) BS01 HEM ? GO:0004601 ... P68871 14705937
    47727 1rq4:A (2.11) BS01 HEM ? GO:0004601 ... P69905 14705937
    47728 1rq4:A (2.11) BS02 NO ? GO:0004601 ... P69905 14705937
    47729 1rq4:B (2.11) BS01 HEM ? GO:0004601 ... P68871 14705937
    47730 1rq4:B (2.11) BS02 NO ? GO:0004601 ... P68871 14705937
    47731 1rq4:C (2.11) BS01 HEM ? GO:0004601 ... P69905 14705937
    47732 1rq4:C (2.11) BS02 NO ? GO:0004601 ... P69905 14705937
    47733 1rq4:D (2.11) BS01 HEM ? GO:0004601 ... P68871 14705937
    47734 1rq4:D (2.11) BS02 NO ? GO:0004601 ... P68871 14705937
    47735 1rq5:A (2.4) BS01 BGC 3.2.1.- GO:0004553 ... Q59325 14756552
    47736 1rq5:A (2.4) BS02 BGC 3.2.1.- GO:0004553 ... Q59325 14756552
    47737 1rq5:A (2.4) BS03 BGC 3.2.1.- GO:0004553 ... Q59325 14756552
    47738 1rq5:A (2.4) BS04 BGC 3.2.1.- GO:0004553 ... Q59325 14756552
    47739 1rq5:A (2.4) BS05 CA 3.2.1.- GO:0004553 ... Q59325 14756552
    47740 1rq5:A (2.4) BS06 CA 3.2.1.- GO:0004553 ... Q59325 14756552
    47741 1rq7:A (2.6) BS01 GDP ? GO:0000287 ... P9WN95 15342249
    47742 1rq9:A (2.6) BS01 DMQ 3.4.23.16 GO:0004190 ... Q5RTL1 14990731
    47743 1rq9:B (2.6) BS01 DMQ 3.4.23.16 GO:0004190 ... Q5RTL1 14990731
    47744 1rqa:A (2.11) BS01 HEM ? GO:0004601 ... P69905 14705937
    47745 1rqa:A (2.11) BS02 NO ? GO:0004601 ... P69905 14705937
    47746 1rqa:B (2.11) BS01 HEM ? GO:0004601 ... P68871 14705937
    47747 1rqa:B (2.11) BS02 NO ? GO:0004601 ... P68871 14705937
    47748 1rqa:C (2.11) BS01 HEM ? GO:0004601 ... P69905 14705937
    47749 1rqa:D (2.11) BS01 HEM ? GO:0004601 ... P68871 14705937
    47750 1rqa:D (2.11) BS02 NO ? GO:0004601 ... P68871 14705937
    47751 1rqb:A (1.9) BS01 CO 2.1.3.1 GO:0003824 ... Q70AC7 15329673
    47752 1rqc:A (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 15010544
    47753 1rqc:B (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 15010544
    47754 1rqc:C (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 15010544
    47755 1rqc:D (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 15010544
    47756 1rqc:E (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 15010544
    47757 1rqc:F (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 15010544
    47758 1rqc:G (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 15010544
    47759 1rqc:H (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 15010544
    47760 1rqc:I (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 15010544
    47761 1rqc:J (2.8) BS01 CO 3.5.1.88 GO:0042586 ... Q8I372 15010544
    47762 1rqd:A (3.0) BS01 NAD 2.5.1.46 GO:0005515 ... P49366 15100216
    47763 1rqd:A (3.0) BS02 GC7 2.5.1.46 GO:0005515 ... P49366 15100216
    47764 1rqd:B (3.0) BS01 NAD 2.5.1.46 GO:0005515 ... P49366 15100216
    47765 1rqd:B (3.0) BS02 GC7 2.5.1.46 GO:0005515 ... P49366 15100216
    47766 1rqe:A (2.5) BS01 OAA 2.1.3.1 GO:0003824 ... Q70AC7 15329673
    47767 1rqe:A (2.5) BS02 CO 2.1.3.1 GO:0003824 ... Q70AC7 15329673
    47768 1rqf:A (2.89) BS01 ZN 2.7.1.37 GO:0005956 ... P28021 15388915
    47769 1rqf:B (2.89) BS01 peptide 2.7.1.37 GO:0005956 ... P28021 15388915
    47770 1rqf:B (2.89) BS02 peptide 2.7.1.37 GO:0005956 ... P28021 15388915
    47771 1rqf:B (2.89) BS03 ZN 2.7.1.37 GO:0005956 ... P28021 15388915
    47772 1rqf:D (2.89) BS01 peptide 2.7.1.37 GO:0005956 ... P28021 15388915
    47773 1rqf:D (2.89) BS02 ZN 2.7.1.37 GO:0005956 ... P28021 15388915
    47774 1rqf:E (2.89) BS01 peptide 2.7.1.37 GO:0005956 ... P28021 15388915
    47775 1rqf:E (2.89) BS02 ZN 2.7.1.37 GO:0005956 ... P28021 15388915
    47776 1rqf:G (2.89) BS01 ZN 2.7.1.37 GO:0005956 ... P28021 15388915
    47777 1rqf:H (2.89) BS01 ZN 2.7.1.37 GO:0005956 ... P28021 15388915
    47778 1rqf:J (2.89) BS01 peptide 2.7.1.37 GO:0005956 ... P28021 15388915
    47779 1rqf:J (2.89) BS02 ZN 2.7.1.37 GO:0005956 ... P28021 15388915
    47780 1rqf:K (2.89) BS01 ZN 2.7.1.37 GO:0005956 ... P28021 15388915
    47781 1rqg:A (2.9) BS01 ZN 6.1.1.10 GO:0000049 ... Q9V011 14992601
    47782 1rqh:A (2.0) BS01 CO 2.1.3.1 GO:0003824 ... Q70AC7 15329673
    47783 1rqh:A (2.0) BS02 PYR 2.1.3.1 GO:0003824 ... Q70AC7 15329673
    47784 1rqi:A (2.42) BS01 MG 2.5.1.10 GO:0004161 ... P22939 14672944
    47785 1rqi:A (2.42) BS02 MG 2.5.1.10 GO:0004161 ... P22939 14672944
    47786 1rqi:A (2.42) BS03 DST 2.5.1.10 GO:0004161 ... P22939 14672944
    47787 1rqi:A (2.42) BS04 IPR 2.5.1.10 GO:0004161 ... P22939 14672944
    47788 1rqi:B (2.42) BS01 MG 2.5.1.10 GO:0004161 ... P22939 14672944
    47789 1rqi:B (2.42) BS02 MG 2.5.1.10 GO:0004161 ... P22939 14672944
    47790 1rqi:B (2.42) BS03 DST 2.5.1.10 GO:0004161 ... P22939 14672944
    47791 1rqi:B (2.42) BS04 IPR 2.5.1.10 GO:0004161 ... P22939 14672944
    47792 1rqj:A (1.95) BS01 MG 2.5.1.10 GO:0004161 ... P22939 14672944
    47793 1rqj:A (1.95) BS02 MG 2.5.1.10 GO:0004161 ... P22939 14672944
    47794 1rqj:A (1.95) BS03 IPE 2.5.1.10 GO:0004161 ... P22939 14672944
    47795 1rqj:A (1.95) BS04 RIS 2.5.1.10 GO:0004161 ... P22939 14672944
    47796 1rqj:B (1.95) BS01 MG 2.5.1.10 GO:0004161 ... P22939 14672944
    47797 1rqj:B (1.95) BS02 MG 2.5.1.10 GO:0004161 ... P22939 14672944
    47798 1rqj:B (1.95) BS03 IPE 2.5.1.10 GO:0004161 ... P22939 14672944
    47799 1rqj:B (1.95) BS04 RIS 2.5.1.10 GO:0004161 ... P22939 14672944
    47800 1rqk:L (2.7) BS01 BCL ? GO:0009772 ... P0C0Y8 15130469

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).