SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    50401 1sl0:C (3.2) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P00581 15235589
    50402 1sl1:A (2.2) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P00581 15235589
    50403 1sl1:A (2.2) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P00581 15235589
    50404 1sl2:A (2.3) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P00581 15235589
    50405 1sl2:A (2.3) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P00581 15235589
    50406 1sl2:A (2.3) BS03 MG 2.7.7.7
    3.1.11.-
    GO:0000166 ... P00581 15235589
    50407 1sl2:A (2.3) BS04 MG 2.7.7.7
    3.1.11.-
    GO:0000166 ... P00581 15235589
    50408 1sl2:A (2.3) BS05 DAD 2.7.7.7
    3.1.11.-
    GO:0000166 ... P00581 15235589
    50409 1sl3:A (1.81) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 15163182
    50410 1sl3:A (1.81) BS02 170 3.4.21.5 GO:0004252 ... P00734 15163182 MOAD: Ki=1.4pM
    BindingDB: Ki=0.001400nM
    50411 1sl4:A (1.55) BS01 MAN ? N/A Q9NNX6 15195147
    50412 1sl4:A (1.55) BS02 MAN ? N/A Q9NNX6 15195147
    50413 1sl4:A (1.55) BS03 CA ? N/A Q9NNX6 15195147
    50414 1sl4:A (1.55) BS04 CA ? N/A Q9NNX6 15195147
    50415 1sl4:A (1.55) BS05 CA ? N/A Q9NNX6 15195147
    50416 1sl5:A (1.8) BS01 FUC ? N/A Q9NNX6 15195147
    50417 1sl5:A (1.8) BS02 CA ? N/A Q9NNX6 15195147
    50418 1sl5:A (1.8) BS03 CA ? N/A Q9NNX6 15195147
    50419 1sl6:A (2.25) BS01 FUC ? N/A Q9H2X3 15195147
    50420 1sl6:A (2.25) BS02 CA ? N/A Q9H2X3 15195147
    50421 1sl6:A (2.25) BS03 CA ? N/A Q9H2X3 15195147
    50422 1sl6:A (2.25) BS04 CA ? N/A Q9H2X3 15195147
    50423 1sl6:A (2.25) BS05 CA ? N/A Q9H2X3 15195147
    50424 1sl6:A (2.25) BS06 CA ? N/A Q9H2X3 15195147
    50425 1sl6:B (2.25) BS01 FUC ? N/A Q9H2X3 15195147
    50426 1sl6:B (2.25) BS02 GAL ? N/A Q9H2X3 15195147
    50427 1sl6:B (2.25) BS03 CA ? N/A Q9H2X3 15195147
    50428 1sl6:B (2.25) BS04 CA ? N/A Q9H2X3 15195147
    50429 1sl6:B (2.25) BS05 CA ? N/A Q9H2X3 15195147
    50430 1sl6:B (2.25) BS06 CA ? N/A Q9H2X3 15195147
    50431 1sl6:B (2.25) BS07 CA ? N/A Q9H2X3 15195147
    50432 1sl6:C (2.25) BS01 FUC ? N/A Q9H2X3 15195147
    50433 1sl6:C (2.25) BS02 CA ? N/A Q9H2X3 15195147
    50434 1sl6:C (2.25) BS03 CA ? N/A Q9H2X3 15195147
    50435 1sl6:C (2.25) BS04 CA ? N/A Q9H2X3 15195147
    50436 1sl6:C (2.25) BS05 CA ? N/A Q9H2X3 15195147
    50437 1sl6:D (2.25) BS01 FUC ? N/A Q9H2X3 15195147
    50438 1sl6:D (2.25) BS02 CA ? N/A Q9H2X3 15195147
    50439 1sl6:D (2.25) BS03 CA ? N/A Q9H2X3 15195147
    50440 1sl6:D (2.25) BS04 CA ? N/A Q9H2X3 15195147
    50441 1sl6:D (2.25) BS05 CA ? N/A Q9H2X3 15195147
    50442 1sl6:E (2.25) BS01 FUC ? N/A Q9H2X3 15195147
    50443 1sl6:E (2.25) BS02 CA ? N/A Q9H2X3 15195147
    50444 1sl6:E (2.25) BS03 CA ? N/A Q9H2X3 15195147
    50445 1sl6:E (2.25) BS04 CA ? N/A Q9H2X3 15195147
    50446 1sl6:F (2.25) BS01 FUC ? N/A Q9H2X3 15195147
    50447 1sl6:F (2.25) BS02 CA ? N/A Q9H2X3 15195147
    50448 1sl6:F (2.25) BS03 CA ? N/A Q9H2X3 15195147
    50449 1sl6:F (2.25) BS04 CA ? N/A Q9H2X3 15195147
    50450 1sl7:A (2.2) BS01 CA ? GO:0005509 ... Q27709 15689515
    50451 1sl7:A (2.2) BS02 CA ? GO:0005509 ... Q27709 15689515
    50452 1sl7:A (2.2) BS03 CA ? GO:0005509 ... Q27709 15689515
    50453 1sl8:A (1.7) BS01 CA ? GO:0005509 ... P07164 15689515
    50454 1sl8:A (1.7) BS02 CA ? GO:0005509 ... P07164 15689515
    50455 1sl8:A (1.7) BS03 CA ? GO:0005509 ... P07164 15689515
    50456 1sl9:A (1.17) BS01 CZH ? GO:0005509 ... Q27709 N/A
    50457 1sla:A (2.45) BS01 GAL ? GO:0005576 ... P11116 7773775
    50458 1slb:A (2.3) BS01 GAL ? GO:0005576 ... P11116 7773775
    50459 1slb:C (2.3) BS01 GAL ? GO:0005576 ... P11116 7773775
    50460 1slc:A (2.15) BS01 GAL ? GO:0005576 ... P11116 7773775
    50461 1slc:B (2.15) BS01 GAL ? GO:0005576 ... P11116 7773775
    50462 1sld:B (2.5) BS01 peptide ? GO:0009374 ... P22629 7492542
    50463 1sle:B (2.0) BS01 peptide ? GO:0009374 ... P22629 7492542
    50464 1sle:D (2.0) BS01 peptide ? GO:0009374 ... P22629 7492542
    50465 1slf:B (1.76) BS01 SO4 ? GO:0009374 ... P22629 7492542
    50466 1slf:B (1.76) BS02 SO4 ? GO:0009374 ... P22629 7492542
    50467 1slf:D (1.76) BS01 SO4 ? GO:0009374 ... P22629 7492542
    50468 1slf:D (1.76) BS02 SO4 ? GO:0009374 ... P22629 7492542
    50469 1slg:B (1.76) BS01 peptide ? GO:0009374 ... P22629 7492542
    50470 1slg:D (1.76) BS01 peptide ? GO:0009374 ... P22629 7492542
    50471 1sli:A (2.0) BS01 DAN 4.2.2.15 GO:0004308 ... Q27701 9562562
    50472 1slm:A (1.9) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 8535233
    50473 1slm:A (1.9) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 8535233
    50474 1slm:A (1.9) BS03 CA 3.4.24.17 GO:0004222 ... P08254 8535233
    50475 1slm:A (1.9) BS04 CA 3.4.24.17 GO:0004222 ... P08254 8535233
    50476 1sln:A (2.27) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 8535233
    50477 1sln:A (2.27) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 8535233
    50478 1sln:A (2.27) BS03 CA 3.4.24.17 GO:0004222 ... P08254 8535233
    50479 1sln:A (2.27) BS04 CA 3.4.24.17 GO:0004222 ... P08254 8535233
    50480 1sln:A (2.27) BS05 CA 3.4.24.17 GO:0004222 ... P08254 8535233
    50481 1sln:A (2.27) BS06 8MI 3.4.24.17 GO:0004222 ... P08254 8535233
    50482 1slt:A (1.9) BS01 GAL ? GO:0005576 ... P11116 8108426
    50483 1slt:B (1.9) BS01 GAL ? GO:0005576 ... P11116 8108426
    50484 1slu:B (1.8) BS01 CA 3.4.21.4 GO:0004252 ... P00763 8634241
    50485 1slv:B (2.3) BS01 CA 3.4.21.4 GO:0004252 ... P00763 8634241
    50486 1slv:B (2.3) BS02 CU 3.4.21.4 GO:0004252 ... P00763 8634241
    50487 1slw:B (2.0) BS01 CA 3.4.21.4 GO:0004252 ... P00763 8634241
    50488 1slx:B (2.2) BS01 CA 3.4.21.4 GO:0004252 ... P00763 8634241
    50489 1slx:B (2.2) BS02 ZN 3.4.21.4 GO:0004252 ... P00763 8634241
    50490 1sly:A (2.8) BS01 BLG 4.2.2.n1 GO:0000270 ... P0AGC3 7548026
    50491 1sm1:1 (3.42) BS01 rna ? GO:0003735 ... Q9RSS4 15059283
    50492 1sm1:A (3.42) BS01 rna ? GO:0002181 ... Q9RXJ9 15059283
    50493 1sm1:B (3.42) BS01 rna ? GO:0003735 ... Q9RXK2 15059283
    50494 1sm1:C (3.42) BS01 rna ? GO:0003735 ... Q9RXK1 15059283
    50495 1sm1:G (3.42) BS01 rna ? GO:0003735 ... Q9RSS7 15059283
    50496 1sm1:H (3.42) BS01 rna ? GO:0003729 ... Q9RXY1 15059283
    50497 1sm1:I (3.42) BS01 rna ? GO:0003735 ... Q9RXJ2 15059283
    50498 1sm1:J (3.42) BS01 rna ? GO:0003735 ... Q9RSK9 15059283
    50499 1sm1:L (3.42) BS01 rna ? GO:0003735 ... Q9RSJ5 15059283
    50500 1sm1:O (3.42) BS01 rna ? GO:0000027 ... Q9RSW7 15059283
    50501 1sm1:P (3.42) BS01 rna ? GO:0003723 ... Q9RY64 15059283
    50502 1sm1:Q (3.42) BS01 rna ? GO:0003735 ... Q9RXJ7 15059283
    50503 1sm1:S (3.42) BS01 rna ? GO:0003723 ... Q9RXJ1 15059283
    50504 1sm1:T (3.42) BS01 rna ? GO:0003723 ... Q9RX88 15059283
    50505 1sm1:X (3.42) BS01 rna ? GO:0003735 ... Q9RSL0 15059283
    50506 1sm1:Y (3.42) BS01 rna ? GO:0003735 ... Q9RW44 15059283
    50507 1sm1:Z (3.42) BS01 rna ? GO:0003735 ... P49228 15059283
    50508 1sm2:A (2.3) BS01 STU 2.7.10.2 GO:0004672 ... Q08881 14766749 MOAD: Ki<10nM
    50509 1sm2:B (2.3) BS01 STU 2.7.10.2 GO:0004672 ... Q08881 14766749 MOAD: Ki<10nM
    50510 1sm3:H (1.95) BS01 peptide ? N/A P01801 9826510
    50511 1sm3:L (1.95) BS01 peptide ? GO:0005886 ... P01723 9826510
    50512 1sm4:A (2.5) BS01 FAD 1.18.1.2 GO:0016491 ... Q9M4D2 11053431
    50513 1sm4:B (2.5) BS01 FAD 1.18.1.2 GO:0016491 ... Q9M4D2 11053431
    50514 1sm8:A (2.9) BS01 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50515 1sm8:A (2.9) BS02 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50516 1sm8:B (2.9) BS01 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50517 1sm8:B (2.9) BS02 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50518 1sm8:C (2.9) BS01 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50519 1sm8:C (2.9) BS02 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50520 1sm9:A (2.2) BS01 NAD 1.1.1.307 GO:0016491 ... O74237 15320875
    50521 1sm9:B (2.2) BS01 NAD 1.1.1.307 GO:0016491 ... O74237 15320875
    50522 1sm9:C (2.2) BS01 NAD 1.1.1.307 GO:0016491 ... O74237 15320875
    50523 1sm9:D (2.2) BS01 NAD 1.1.1.307 GO:0016491 ... O74237 15320875
    50524 1smc:A (2.1) BS01 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50525 1smc:A (2.1) BS02 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50526 1smc:B (2.1) BS01 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50527 1smc:B (2.1) BS02 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50528 1smc:C (2.1) BS01 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50529 1smc:C (2.1) BS02 DUT 3.6.1.23 GO:0000287 ... P9WNS5 15276840
    50530 1smd:A (1.6) BS01 CA 3.2.1.1 GO:0003824 ... P0DUB6 15299664
    50531 1smd:A (1.6) BS02 CL 3.2.1.1 GO:0003824 ... P0DUB6 15299664
    50532 1sme:A (2.7) BS01 peptide 3.4.23.39 GO:0004190 ... P46925 8816746
    50533 1sme:B (2.7) BS01 peptide 3.4.23.39 GO:0004190 ... P46925 8816746
    50534 1smf:E (2.1) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 7798176
    50535 1smf:E (2.1) BS02 CA 3.4.21.4 GO:0004175 ... P00760 7798176
    50536 1smg:A (-1.00) BS01 CA ? GO:0005509 ... P02588 9109645
    50537 1smh:A (2.044) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 15196017
    50538 1smh:A (2.044) BS02 BU3 2.7.11.11 GO:0000287 ... P00517 15196017
    50539 1smh:A (2.044) BS03 BU3 2.7.11.11 GO:0000287 ... P00517 15196017
    50540 1smh:A (2.044) BS04 BU3 2.7.11.11 GO:0000287 ... P00517 15196017
    50541 1smh:A (2.044) BS05 MG8 2.7.11.11 GO:0000287 ... P00517 15196017
    50542 1smi:A (2.0) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 15020590
    50543 1smi:B (2.0) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 15020590
    50544 1smj:A (2.75) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 15020590
    50545 1smj:B (2.75) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 15020590
    50546 1smj:C (2.75) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 15020590
    50547 1smj:D (2.75) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 15020590
    50548 1sml:A (1.7) BS01 ZN 3.5.2.6 GO:0008270 ... P52700 9811546
    50549 1sml:A (1.7) BS02 ZN 3.5.2.6 GO:0008270 ... P52700 9811546
    50550 1smm:A (1.36) BS01 FE ? GO:0005506 ... P00268 15067525
    50551 1smp:A (2.3) BS01 ZN 3.4.24.40 GO:0001907 ... P23694 7752231
    50552 1smp:A (2.3) BS02 CA 3.4.24.40 GO:0001907 ... P23694 7752231
    50553 1smp:A (2.3) BS03 CA 3.4.24.40 GO:0001907 ... P23694 7752231
    50554 1smp:A (2.3) BS04 CA 3.4.24.40 GO:0001907 ... P23694 7752231
    50555 1smp:A (2.3) BS05 CA 3.4.24.40 GO:0001907 ... P23694 7752231
    50556 1smp:A (2.3) BS06 CA 3.4.24.40 GO:0001907 ... P23694 7752231
    50557 1smp:A (2.3) BS07 CA 3.4.24.40 GO:0001907 ... P23694 7752231
    50558 1smp:A (2.3) BS08 CA 3.4.24.40 GO:0001907 ... P23694 7752231
    50559 1smr:A (2.0) BS01 peptide 3.4.23.15 GO:0004190 ... P00796 8107115
    50560 1smr:C (2.0) BS01 peptide 3.4.23.15 GO:0004190 ... P00796 8107115
    50561 1smr:E (2.0) BS01 peptide 3.4.23.15 GO:0004190 ... P00796 8107115
    50562 1smr:G (2.0) BS01 peptide 3.4.23.15 GO:0004190 ... P00796 8107115
    50563 1smu:A (1.43) BS01 FE2 ? GO:0005506 ... P00268 15067525
    50564 1smv:A (3.0) BS01 CA ? GO:0005198 ... Q9EB06 8589997
    50565 1smv:A (3.0) BS02 CA ? GO:0005198 ... Q9EB06 8589997
    50566 1smv:B (3.0) BS01 CA ? GO:0005198 ... Q9EB06 8589997
    50567 1smv:B (3.0) BS02 CA ? GO:0005198 ... Q9EB06 8589997
    50568 1smv:C (3.0) BS01 CA ? GO:0005198 ... Q9EB06 8589997
    50569 1smv:C (3.0) BS02 CA ? GO:0005198 ... Q9EB06 8589997
    50570 1smw:A (1.38) BS01 FE2 ? GO:0005506 ... P00268 15067525
    50571 1smy:A (2.7) BS01 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50572 1smy:A (2.7) BS02 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50573 1smy:A (2.7) BS03 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50574 1smy:A (2.7) BS04 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50575 1smy:A (2.7) BS05 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50576 1smy:B (2.7) BS01 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50577 1smy:B (2.7) BS02 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50578 1smy:B (2.7) BS03 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50579 1smy:B (2.7) BS04 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50580 1smy:B (2.7) BS05 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50581 1smy:B (2.7) BS06 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50582 1smy:B (2.7) BS07 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50583 1smy:B (2.7) BS08 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50584 1smy:B (2.7) BS09 MG 2.7.7.6 GO:0003677 ... Q9Z9H6 15109491
    50585 1smy:C (2.7) BS01 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50586 1smy:C (2.7) BS02 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50587 1smy:C (2.7) BS03 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50588 1smy:C (2.7) BS04 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50589 1smy:C (2.7) BS05 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50590 1smy:C (2.7) BS06 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50591 1smy:C (2.7) BS07 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50592 1smy:C (2.7) BS08 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50593 1smy:C (2.7) BS09 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50594 1smy:C (2.7) BS10 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50595 1smy:C (2.7) BS11 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50596 1smy:C (2.7) BS12 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50597 1smy:C (2.7) BS13 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50598 1smy:C (2.7) BS14 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50599 1smy:C (2.7) BS15 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491
    50600 1smy:C (2.7) BS16 MG 2.7.7.6 GO:0003677 ... Q8RQE9 15109491

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).