SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    50801 1soj:K (2.9) BS01 MG 3.1.4.17 GO:0004114 ... Q13370 15147193
    50802 1soj:L (2.9) BS01 MG 3.1.4.17 GO:0004114 ... Q13370 15147193
    50803 1som:A (2.2) BS01 VXA 3.1.1.7 GO:0001507 ... P04058 10353814
    50804 1son:A (2.55) BS01 AMP 6.3.4.4 GO:0000166 ... P0A7D4 8790347
    50805 1soo:A (2.6) BS01 H5P 6.3.4.4 GO:0000166 ... P0A7D4 8790347
    50806 1sos:A (2.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 1463506
    50807 1sos:A (2.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 1463506
    50808 1sos:B (2.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 1463506
    50809 1sos:B (2.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 1463506
    50810 1sos:C (2.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 1463506
    50811 1sos:C (2.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 1463506
    50812 1sos:D (2.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 1463506
    50813 1sos:D (2.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 1463506
    50814 1sos:E (2.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 1463506
    50815 1sos:E (2.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 1463506
    50816 1sos:F (2.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 1463506
    50817 1sos:F (2.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 1463506
    50818 1sos:G (2.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 1463506
    50819 1sos:G (2.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 1463506
    50820 1sos:H (2.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 1463506
    50821 1sos:H (2.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 1463506
    50822 1sos:I (2.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 1463506
    50823 1sos:I (2.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 1463506
    50824 1sos:J (2.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 1463506
    50825 1sos:J (2.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 1463506
    50826 1sow:A (1.9) BS01 OXL 1.1.1.27 GO:0003824 ... Q27797 N/A
    50827 1sow:A (1.9) BS02 NAD 1.1.1.27 GO:0003824 ... Q27797 N/A
    50828 1sow:B (1.9) BS01 OXL 1.1.1.27 GO:0003824 ... Q27797 N/A
    50829 1sow:B (1.9) BS02 NAD 1.1.1.27 GO:0003824 ... Q27797 N/A
    50830 1sox:A (1.9) BS01 SO4 1.8.3.1 GO:0005739 ... P07850 9428520
    50831 1sox:A (1.9) BS02 HEM 1.8.3.1 GO:0005739 ... P07850 9428520
    50832 1sox:B (1.9) BS01 SO4 1.8.3.1 GO:0005739 ... P07850 9428520
    50833 1sox:B (1.9) BS02 MO 1.8.3.1 GO:0005739 ... P07850 9428520
    50834 1sox:B (1.9) BS03 HEM 1.8.3.1 GO:0005739 ... P07850 9428520
    50835 1soz:A (2.4) BS01 peptide 3.4.21.107 GO:0004252 ... P0AEE3 15137941
    50836 1soz:B (2.4) BS01 peptide 3.4.21.107 GO:0004252 ... P0AEE3 15137941
    50837 1sp2:A (-1.00) BS01 ZN ? N/A P08047 9065444
    50838 1sp3:A (2.2) BS01 HEC ? GO:0016491 ... Q8E9W8 15361860
    50839 1sp3:A (2.2) BS02 HEC ? GO:0016491 ... Q8E9W8 15361860
    50840 1sp3:A (2.2) BS03 HEC ? GO:0016491 ... Q8E9W8 15361860
    50841 1sp3:A (2.2) BS04 HEC ? GO:0016491 ... Q8E9W8 15361860
    50842 1sp3:A (2.2) BS05 HEC ? GO:0016491 ... Q8E9W8 15361860
    50843 1sp3:A (2.2) BS06 HEC ? GO:0016491 ... Q8E9W8 15361860
    50844 1sp3:A (2.2) BS07 HEC ? GO:0016491 ... Q8E9W8 15361860
    50845 1sp3:A (2.2) BS08 HEC ? GO:0016491 ... Q8E9W8 15361860
    50846 1sp4:A (2.2) BS01 EP2 3.4.22.1 GO:0006508 ... P07688 15084146
    50847 1sp4:B (2.2) BS01 EP2 3.4.22.1 GO:0006508 ... P07688 15084146
    50848 1sp5:A (1.8) BS01 peptide 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 N/A
    50849 1sp5:B (1.8) BS01 peptide 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 N/A
    50850 1sp8:A (2.0) BS01 FE2 N/A GO:0003868 ... N/A 15084729
    50851 1sp8:B (2.0) BS01 FE2 N/A GO:0003868 ... N/A 15084729
    50852 1sp8:C (2.0) BS01 FE2 N/A GO:0003868 ... N/A 15084729
    50853 1sp8:D (2.0) BS01 FE2 N/A GO:0003868 ... N/A 15084729
    50854 1sp9:A (3.0) BS01 FE2 1.13.11.27 GO:0003868 ... P93836 15084729
    50855 1sp9:B (3.0) BS01 FE2 1.13.11.27 GO:0003868 ... P93836 15084729
    50856 1spa:A (2.0) BS01 NPL 2.6.1.1 GO:0003824 ... P00509 1610831
    50857 1spd:A (2.4) BS01 CU 1.15.1.1 GO:0000303 ... P00441 8351519
    50858 1spd:A (2.4) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 8351519
    50859 1spd:B (2.4) BS01 CU 1.15.1.1 GO:0000303 ... P00441 8351519
    50860 1spd:B (2.4) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 8351519
    50861 1spe:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 8642596
    50862 1spg:A (1.95) BS01 HEM ? GO:0004601 ... P56250 8605630
    50863 1spg:B (1.95) BS01 HEM ? GO:0004601 ... P56251 8605630
    50864 1spj:A (1.7) BS01 CA 3.4.21.35 GO:0003073 ... P06870 15651049
    50865 1sps:A (2.7) BS01 peptide 2.7.10.2 N/A P00524 7680960
    50866 1sps:A (2.7) BS02 peptide 2.7.10.2 N/A P00524 7680960
    50867 1sps:B (2.7) BS01 peptide 2.7.10.2 N/A P00524 7680960
    50868 1sps:C (2.7) BS01 peptide 2.7.10.2 N/A P00524 7680960
    50869 1spu:A (2.0) BS01 CU 1.4.3.21 GO:0005507 ... P46883 9048544
    50870 1spu:A (2.0) BS02 CA 1.4.3.21 GO:0005507 ... P46883 9048544
    50871 1spu:A (2.0) BS03 CA 1.4.3.21 GO:0005507 ... P46883 9048544
    50872 1spu:B (2.0) BS01 CU 1.4.3.21 GO:0005507 ... P46883 9048544
    50873 1spu:B (2.0) BS02 CA 1.4.3.21 GO:0005507 ... P46883 9048544
    50874 1spu:B (2.0) BS03 CA 1.4.3.21 GO:0005507 ... P46883 9048544
    50875 1sq3:A (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50876 1sq3:A (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50877 1sq3:A (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50878 1sq3:B (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50879 1sq3:B (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50880 1sq3:B (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50881 1sq3:C (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50882 1sq3:C (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50883 1sq3:C (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50884 1sq3:D (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50885 1sq3:D (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50886 1sq3:D (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50887 1sq3:E (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50888 1sq3:E (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50889 1sq3:E (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50890 1sq3:F (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50891 1sq3:F (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50892 1sq3:F (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50893 1sq3:G (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50894 1sq3:G (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50895 1sq3:G (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50896 1sq3:H (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50897 1sq3:H (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50898 1sq3:H (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50899 1sq3:I (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50900 1sq3:I (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50901 1sq3:I (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50902 1sq3:J (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50903 1sq3:J (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50904 1sq3:J (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50905 1sq3:K (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50906 1sq3:K (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50907 1sq3:K (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50908 1sq3:L (2.7) BS01 FE ? GO:0004322 ... O29424 15837202
    50909 1sq3:L (2.7) BS02 FE ? GO:0004322 ... O29424 15837202
    50910 1sq3:L (2.7) BS03 FE ? GO:0004322 ... O29424 15837202
    50911 1sq5:A (2.2) BS01 PAU 2.7.1.33 GO:0004594 ... P0A6I3 15136582
    50912 1sq5:A (2.2) BS02 ADP 2.7.1.33 GO:0004594 ... P0A6I3 15136582
    50913 1sq5:B (2.2) BS01 PAU 2.7.1.33 GO:0004594 ... P0A6I3 15136582
    50914 1sq5:B (2.2) BS02 ADP 2.7.1.33 GO:0004594 ... P0A6I3 15136582
    50915 1sq5:C (2.2) BS01 PAU 2.7.1.33 GO:0004594 ... P0A6I3 15136582
    50916 1sq5:C (2.2) BS02 ADP 2.7.1.33 GO:0004594 ... P0A6I3 15136582
    50917 1sq5:D (2.2) BS01 PAU 2.7.1.33 GO:0004594 ... P0A6I3 15136582
    50918 1sq5:D (2.2) BS02 ADP 2.7.1.33 GO:0004594 ... P0A6I3 15136582
    50919 1sq6:A (2.4) BS01 SO4 2.4.2.1
    2.4.2.44
    GO:0003824 ... Q8I3X4 16131758
    50920 1sqa:A (2.0) BS01 UI1 3.4.21.73 GO:0004252 ... P00749 15149645 MOAD: Ki=0.00062uM
    BindingDB: IC50=620nM, Ki=0.620000nM
    50921 1sqb:C (2.69) BS01 HEM 1.10.2.2 GO:0005743 ... P00157 15312779
    50922 1sqb:C (2.69) BS02 HEM 1.10.2.2 GO:0005743 ... P00157 15312779
    50923 1sqb:C (2.69) BS03 AZO 1.10.2.2 GO:0005743 ... P00157 15312779
    50924 1sqb:D (2.69) BS01 HEM 7.1.1.8 GO:0009055 ... P00125 15312779
    50925 1sqb:E (2.69) BS01 FES 7.1.1.8 GO:0008121 ... P13272 15312779
    50926 1sqd:A (1.8) BS01 FE 1.13.11.27 GO:0003868 ... P93836 15301540
    50927 1sqf:A (2.1) BS01 SAM 2.1.1.176 GO:0001510 ... P36929 14656444
    50928 1sqi:A (2.15) BS01 FE 1.13.11.27 GO:0000139 ... P32755 15301540
    50929 1sqi:A (2.15) BS02 869 1.13.11.27 GO:0000139 ... P32755 15301540 MOAD: ic50<20nM
    50930 1sqi:B (2.15) BS01 FE 1.13.11.27 GO:0000139 ... P32755 15301540
    50931 1sqi:B (2.15) BS02 869 1.13.11.27 GO:0000139 ... P32755 15301540 MOAD: ic50<20nM
    50932 1sqk:A (2.5) BS01 peptide 3.6.4.- GO:0000287 ... P68135 15163409
    50933 1sqk:A (2.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 15163409
    50934 1sqk:A (2.5) BS03 LAR 3.6.4.- GO:0000287 ... P68135 15163409
    50935 1sqm:A (2.3) BS01 ZN 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 15078870
    50936 1sqn:A (1.451) BS01 NDR ? N/A P06401 15189034 MOAD: Kd=0.4nM
    BindingDB: Kd=0.4nM, Ki=1.9nM, IC50=3.2nM, EC50=2.2nM
    50937 1sqn:B (1.451) BS01 NDR ? N/A P06401 15189034 MOAD: Kd=0.4nM
    BindingDB: Kd=0.4nM, Ki=1.9nM, IC50=3.2nM, EC50=2.2nM
    50938 1sqo:A (1.84) BS01 UI2 3.4.21.73 GO:0004252 ... P00749 15149645 MOAD: Ki=0.035uM
    BindingDB: Ki=32nM
    50939 1sqp:C (2.7) BS01 HEC ? GO:0005743 ... P00157 15312779
    50940 1sqp:C (2.7) BS02 HEC ? GO:0005743 ... P00157 15312779
    50941 1sqp:C (2.7) BS03 MYX ? GO:0005743 ... P00157 15312779
    50942 1sqp:D (2.7) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 15312779
    50943 1sqp:E (2.7) BS01 FES 7.1.1.8 GO:0008121 ... P13272 15312779
    50944 1sqp:E (2.7) BS02 PLX 7.1.1.8 GO:0008121 ... P13272 15312779
    50945 1sqp:J (2.7) BS01 PLX 1.10.2.2 GO:0005739 ... P00130 15312779
    50946 1sqq:C (3.0) BS01 HEC ? GO:0005743 ... P00157 15312779
    50947 1sqq:C (3.0) BS02 HEC ? GO:0005743 ... P00157 15312779
    50948 1sqq:C (3.0) BS03 UQ2 ? GO:0005743 ... P00157 15312779
    50949 1sqq:C (3.0) BS04 OST ? GO:0005743 ... P00157 15312779
    50950 1sqq:D (3.0) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 15312779
    50951 1sqq:E (3.0) BS01 FES 7.1.1.8 GO:0008121 ... P13272 15312779
    50952 1sqt:A (1.9) BS01 UI3 3.4.21.73 GO:0004252 ... P00749 15149645 MOAD: Ki=0.63uM
    BindingDB: Ki=630nM
    50953 1sqv:C (2.85) BS01 HEC 1.10.2.2 GO:0005743 ... P00157 15312779
    50954 1sqv:C (2.85) BS02 HEC 1.10.2.2 GO:0005743 ... P00157 15312779
    50955 1sqv:C (2.85) BS03 UHD 1.10.2.2 GO:0005743 ... P00157 15312779
    50956 1sqv:C (2.85) BS04 UQ2 1.10.2.2 GO:0005743 ... P00157 15312779
    50957 1sqv:D (2.85) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 15312779
    50958 1sqv:E (2.85) BS01 FES 7.1.1.8 GO:0008121 ... P13272 15312779
    50959 1sqx:C (2.6) BS01 UQ2 ? GO:0005743 ... P00157 15312779
    50960 1sqx:C (2.6) BS02 HEC ? GO:0005743 ... P00157 15312779
    50961 1sqx:C (2.6) BS03 HEC ? GO:0005743 ... P00157 15312779
    50962 1sqx:C (2.6) BS04 SMA ? GO:0005743 ... P00157 15312779
    50963 1sqx:D (2.6) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 15312779
    50964 1sqx:E (2.6) BS01 FES 7.1.1.8 GO:0008121 ... P13272 15312779
    50965 1sqy:A (2.5) BS01 FE 3.4.21.- GO:0001530 ... P02788 N/A
    50966 1sqy:A (2.5) BS02 FE 3.4.21.- GO:0001530 ... P02788 N/A
    50967 1sqy:A (2.5) BS03 CO3 3.4.21.- GO:0001530 ... P02788 N/A
    50968 1sqy:A (2.5) BS04 CO3 3.4.21.- GO:0001530 ... P02788 N/A
    50969 1sqz:A (1.2) BS01 peptide 3.1.1.4 GO:0004623 ... P59071 N/A
    50970 1sr5:A (3.1) BS01 YYB ? GO:0002020 ... P01008 15311268
    50971 1sr5:A (3.1) BS02 U9J ? GO:0002020 ... P01008 15311268
    50972 1sr5:A (3.1) BS03 GU6 ? GO:0002020 ... P01008 15311268
    50973 1sr5:A (3.1) BS04 U9G ? GO:0002020 ... P01008 15311268
    50974 1sr6:B (2.75) BS01 MG ? GO:0005509 ... P13543 15184651
    50975 1sr6:C (2.75) BS01 CA ? GO:0005509 ... P07291 15184651
    50976 1sr7:A (1.46) BS01 MOF ? N/A P06401 15189034 MOAD: Kd=0.08nM
    BindingDB: Kd=0.08nM
    50977 1sr7:B (1.46) BS01 MOF ? N/A P06401 15189034 MOAD: Kd=0.08nM
    BindingDB: Kd=0.08nM
    50978 1sr9:A (2.0) BS01 ZN 2.3.3.13 GO:0000287 ... P9WQB3 15159544
    50979 1sr9:A (2.0) BS02 KIV 2.3.3.13 GO:0000287 ... P9WQB3 15159544
    50980 1sr9:B (2.0) BS01 ZN 2.3.3.13 GO:0000287 ... P9WQB3 15159544
    50981 1sr9:B (2.0) BS02 KIV 2.3.3.13 GO:0000287 ... P9WQB3 15159544
    50982 1sra:A (2.0) BS01 CA ? GO:0005509 ... P09486 8548457
    50983 1sra:A (2.0) BS02 CA ? GO:0005509 ... P09486 8548457
    50984 1sra:A (2.0) BS03 CA ? GO:0005509 ... P09486 8548457
    50985 1srd:A (2.0) BS01 CU 1.15.1.1 GO:0005507 ... P07505 1880134
    50986 1srd:A (2.0) BS02 ZN 1.15.1.1 GO:0005507 ... P07505 1880134
    50987 1srd:B (2.0) BS01 CU 1.15.1.1 GO:0005507 ... P07505 1880134
    50988 1srd:B (2.0) BS02 ZN 1.15.1.1 GO:0005507 ... P07505 1880134
    50989 1srd:C (2.0) BS01 CU 1.15.1.1 GO:0005507 ... P07505 1880134
    50990 1srd:C (2.0) BS02 ZN 1.15.1.1 GO:0005507 ... P07505 1880134
    50991 1srd:D (2.0) BS01 CU 1.15.1.1 GO:0005507 ... P07505 1880134
    50992 1srd:D (2.0) BS02 ZN 1.15.1.1 GO:0005507 ... P07505 1880134
    50993 1sre:A (1.78) BS01 HAB ? GO:0009374 ... P22629 N/A
    50994 1sre:B (1.78) BS01 HAB ? GO:0009374 ... P22629 N/A
    50995 1srf:A (2.0) BS01 MTB ? GO:0009374 ... P22629 N/A
    50996 1srf:B (2.0) BS01 MTB ? GO:0009374 ... P22629 N/A
    50997 1srg:A (1.8) BS01 MHB ? GO:0009374 ... P22629 N/A MOAD: Ka=200000M^-1
    50998 1srg:B (1.8) BS01 MHB ? GO:0009374 ... P22629 N/A MOAD: Ka=200000M^-1
    50999 1srh:A (2.2) BS01 MOB ? GO:0009374 ... P22629 N/A
    51000 1srh:B (2.2) BS01 MOB ? GO:0009374 ... P22629 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).