SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    510801 6mtn:D (2.5) BS01 MAN N/A N/A N/A 30604750
    510802 6mtn:D (2.5) BS02 MAN N/A N/A N/A 30604750
    510803 6mtn:D (2.5) BS03 MAN N/A N/A N/A 30604750
    510804 6mtn:G (2.5) BS01 JYJ ? GO:0019031 ... Q2N0S6 30604750
    510805 6mtn:L (2.5) BS01 MAN N/A N/A N/A 30604750
    510806 6mtn:L (2.5) BS02 MAN N/A N/A N/A 30604750
    510807 6mtp:A (2.036) BS01 peptide N/A N/A N/A 30876875
    510808 6mtp:B (2.036) BS01 peptide N/A N/A N/A 30876875
    510809 6mtp:H (2.036) BS01 peptide N/A N/A N/A 30876875
    510810 6mtp:L (2.036) BS01 peptide N/A N/A N/A 30876875
    510811 6mtt:H (1.7) BS01 peptide N/A N/A N/A 30876875
    510812 6mtt:L (1.7) BS01 peptide N/A N/A N/A 30876875
    510813 6mtu:A (2.141) BS01 peptide ? N/A Q14160 31317644
    510814 6mtu:B (2.141) BS01 peptide ? N/A Q14160 31317644
    510815 6mtv:A (2.597) BS01 peptide ? N/A Q14160 31317644
    510816 6mtv:B (2.597) BS01 peptide ? N/A Q14160 31317644
    510817 6mtw:A (1.999) BS01 ZN 2.3.1.-
    3.1.1.32
    3.1.1.4
    3.1.1.5
    GO:0004622 ... Q8NCC3 30830753
    510818 6mtw:A (1.999) BS02 ZN 2.3.1.-
    3.1.1.32
    3.1.1.4
    3.1.1.5
    GO:0004622 ... Q8NCC3 30830753
    510819 6mtw:B (1.999) BS01 ZN 2.3.1.-
    3.1.1.32
    3.1.1.4
    3.1.1.5
    GO:0004622 ... Q8NCC3 30830753
    510820 6mtw:B (1.999) BS02 ZN 2.3.1.-
    3.1.1.32
    3.1.1.4
    3.1.1.5
    GO:0004622 ... Q8NCC3 30830753
    510821 6mu0:A (1.1) BS01 5RP 5.3.1.6 GO:0004751 ... P47636 N/A
    510822 6mu1:A (4.1) BS01 JYP ? GO:0000902 ... P29994 30470765
    510823 6mu1:B (4.1) BS01 JYP ? GO:0000902 ... P29994 30470765
    510824 6mu1:C (4.1) BS01 JYP ? GO:0000902 ... P29994 30470765
    510825 6mu1:D (4.1) BS01 JYP ? GO:0000902 ... P29994 30470765
    510826 6mu3:H (2.327) BS01 MAN ? N/A P0DOX5 16174734
    510827 6mu3:H (2.327) BS02 MAN ? N/A P0DOX5 16174734
    510828 6mu3:M (2.327) BS01 MAN ? N/A P0DOX5 16174734
    510829 6mu3:M (2.327) BS02 MAN ? N/A P0DOX5 16174734
    510830 6mu4:A (1.62) BS01 dna 2.7.7.7 GO:0000166 ... E1C9K5 31170294
    510831 6mu4:A (1.62) BS02 dna 2.7.7.7 GO:0000166 ... E1C9K5 31170294
    510832 6mu5:A (1.912) BS01 dna 2.7.7.7 GO:0000166 ... E1C9K5 31170294
    510833 6mu5:A (1.912) BS02 rna 2.7.7.7 GO:0000166 ... E1C9K5 31170294
    510834 6mu6:D (2.551) BS01 BMA N/A N/A N/A 30604750
    510835 6mu6:D (2.551) BS02 MAN N/A N/A N/A 30604750
    510836 6mu6:G (2.551) BS01 JYV ? GO:0019031 ... Q2N0S6 30604750
    510837 6mu6:H (2.551) BS01 MAN N/A N/A N/A 30604750
    510838 6mu6:L (2.551) BS01 MAN N/A N/A N/A 30604750
    510839 6mu6:L (2.551) BS02 MAN N/A N/A N/A 30604750
    510840 6mu6:L (2.551) BS03 MAN N/A N/A N/A 30604750
    510841 6mu7:D (2.501) BS01 BMA N/A N/A N/A 30604750
    510842 6mu7:D (2.501) BS02 MAN N/A N/A N/A 30604750
    510843 6mu7:D (2.501) BS03 MAN N/A N/A N/A 30604750
    510844 6mu7:G (2.501) BS01 JYY ? GO:0019031 ... Q2N0S6 30604750 MOAD: Kd=0.002uM
    510845 6mu7:H (2.501) BS01 MAN N/A N/A N/A 30604750
    510846 6mu7:L (2.501) BS01 MAN N/A N/A N/A 30604750
    510847 6mu7:L (2.501) BS02 MAN N/A N/A N/A 30604750
    510848 6mu8:D (2.993) BS01 MAN N/A N/A N/A 30604750
    510849 6mu8:G (2.993) BS01 JYS ? GO:0019031 ... Q2N0S6 30604750
    510850 6mu8:H (2.993) BS01 MAN N/A N/A N/A 30604750
    510851 6mu8:L (2.993) BS01 MAN N/A N/A N/A 30604750
    510852 6mu8:L (2.993) BS02 MAN N/A N/A N/A 30604750
    510853 6mub:H (2.503) BS01 MAN ? N/A P0DOX5 16174734
    510854 6mub:H (2.503) BS02 MAN ? N/A P0DOX5 16174734
    510855 6mub:M (2.503) BS01 MAN ? N/A P0DOX5 16174734
    510856 6mub:M (2.503) BS02 MAN ? N/A P0DOX5 16174734
    510857 6mud:A (2.69) BS01 CA ? GO:0000086 ... P0DP24 31072926
    510858 6mud:A (2.69) BS02 CA ? GO:0000086 ... P0DP24 31072926
    510859 6mud:A (2.69) BS03 CA ? GO:0000086 ... P0DP24 31072926
    510860 6mud:A (2.69) BS04 CA ? GO:0000086 ... P0DP24 31072926
    510861 6mue:A (1.9) BS01 peptide ? GO:0000086 ... P0DP23 31072926
    510862 6mue:A (1.9) BS02 CA ? GO:0000086 ... P0DP23 31072926
    510863 6mue:A (1.9) BS03 CA ? GO:0000086 ... P0DP23 31072926
    510864 6mue:A (1.9) BS04 CA ? GO:0000086 ... P0DP23 31072926
    510865 6mue:A (1.9) BS05 CA ? GO:0000086 ... P0DP23 31072926
    510866 6muf:D (2.91) BS01 MAN N/A N/A N/A 30604750
    510867 6muf:D (2.91) BS02 MAN N/A N/A N/A 30604750
    510868 6muf:H (2.91) BS01 MAN N/A N/A N/A 30604750
    510869 6muf:L (2.91) BS01 MAN N/A N/A N/A 30604750
    510870 6mug:D (2.954) BS01 MAN N/A N/A N/A 30604750
    510871 6mug:D (2.954) BS02 MAN N/A N/A N/A 30604750
    510872 6mug:G (2.954) BS01 JYS ? GO:0019031 ... B3UES2 30604750
    510873 6mug:H (2.954) BS01 MAN N/A N/A N/A 30604750
    510874 6mug:L (2.954) BS01 MAN N/A N/A N/A 30604750
    510875 6mug:L (2.954) BS02 MAN N/A N/A N/A 30604750
    510876 6muj:A (2.249) BS01 CA 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510877 6muj:A (2.249) BS02 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510878 6muj:A (2.249) BS03 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510879 6muj:B (2.249) BS01 CA 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510880 6muj:B (2.249) BS02 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510881 6muj:B (2.249) BS03 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510882 6muj:C (2.249) BS01 CA 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510883 6muj:C (2.249) BS02 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510884 6muj:D (2.249) BS01 CA 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510885 6muj:D (2.249) BS02 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510886 6muj:D (2.249) BS03 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510887 6muj:D (2.249) BS04 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510888 6muj:E (2.249) BS01 CA 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510889 6muj:E (2.249) BS02 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    510890 6muk:A (1.93) BS01 ZN ? GO:0004222 ... Q5F676 N/A
    510891 6mul:A (3.09) BS01 K4A 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 30986068
    510892 6mul:B (3.09) BS01 K4A 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 30986068
    510893 6mum:A (3.06) BS01 K47 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 30986068
    510894 6mum:B (3.06) BS01 K47 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 30986068
    510895 6muo:A (3.6) BS01 dna ? GO:0000786 ... P49450 31353180
    510896 6muo:A (3.6) BS02 dna ? GO:0000786 ... P49450 31353180
    510897 6muo:A (3.6) BS03 peptide ? GO:0000786 ... P49450 31353180
    510898 6muo:B (3.6) BS01 dna ? GO:0000781 ... P62805 31353180
    510899 6muo:B (3.6) BS02 dna ? GO:0000781 ... P62805 31353180
    510900 6muo:C (3.6) BS01 dna ? GO:0000786 ... Q93077 31353180
    510901 6muo:C (3.6) BS02 dna ? GO:0000786 ... Q93077 31353180
    510902 6muo:C (3.6) BS03 peptide ? GO:0000786 ... Q93077 31353180
    510903 6muo:D (3.6) BS01 dna ? GO:0000786 ... Q5QNW6 31353180
    510904 6muo:D (3.6) BS02 dna ? GO:0000786 ... Q5QNW6 31353180
    510905 6muo:E (3.6) BS01 dna ? GO:0000786 ... P49450 31353180
    510906 6muo:E (3.6) BS02 dna ? GO:0000786 ... P49450 31353180
    510907 6muo:E (3.6) BS03 peptide ? GO:0000786 ... P49450 31353180
    510908 6muo:F (3.6) BS01 dna ? GO:0000781 ... P62805 31353180
    510909 6muo:F (3.6) BS02 dna ? GO:0000781 ... P62805 31353180
    510910 6muo:G (3.6) BS01 dna ? GO:0000786 ... Q93077 31353180
    510911 6muo:G (3.6) BS02 dna ? GO:0000786 ... Q93077 31353180
    510912 6muo:G (3.6) BS03 peptide ? GO:0000786 ... Q93077 31353180
    510913 6muo:H (3.6) BS01 dna ? GO:0000786 ... Q5QNW6 31353180
    510914 6muo:H (3.6) BS02 dna ? GO:0000786 ... Q5QNW6 31353180
    510915 6muo:M (3.6) BS01 dna ? GO:0007059 ... Q96H22 31353180
    510916 6muo:M (3.6) BS02 dna ? GO:0007059 ... Q96H22 31353180
    510917 6mup:A (3.5) BS01 dna ? GO:0000786 ... P49450 31353180
    510918 6mup:A (3.5) BS02 dna ? GO:0000786 ... P49450 31353180
    510919 6mup:A (3.5) BS03 peptide ? GO:0000786 ... P49450 31353180
    510920 6mup:B (3.5) BS01 dna ? GO:0000781 ... P62805 31353180
    510921 6mup:B (3.5) BS02 dna ? GO:0000781 ... P62805 31353180
    510922 6mup:C (3.5) BS01 dna ? GO:0000786 ... Q93077 31353180
    510923 6mup:C (3.5) BS02 dna ? GO:0000786 ... Q93077 31353180
    510924 6mup:C (3.5) BS03 peptide ? GO:0000786 ... Q93077 31353180
    510925 6mup:D (3.5) BS01 dna ? GO:0000786 ... Q5QNW6 31353180
    510926 6mup:D (3.5) BS02 dna ? GO:0000786 ... Q5QNW6 31353180
    510927 6mup:E (3.5) BS01 dna ? GO:0000786 ... P49450 31353180
    510928 6mup:E (3.5) BS02 dna ? GO:0000786 ... P49450 31353180
    510929 6mup:E (3.5) BS03 peptide ? GO:0000786 ... P49450 31353180
    510930 6mup:F (3.5) BS01 dna ? GO:0000781 ... P62805 31353180
    510931 6mup:F (3.5) BS02 dna ? GO:0000781 ... P62805 31353180
    510932 6mup:F (3.5) BS03 peptide ? GO:0000781 ... P62805 31353180
    510933 6mup:G (3.5) BS01 dna ? GO:0000786 ... Q93077 31353180
    510934 6mup:G (3.5) BS02 dna ? GO:0000786 ... Q93077 31353180
    510935 6mup:G (3.5) BS03 peptide ? GO:0000786 ... Q93077 31353180
    510936 6mup:H (3.5) BS01 dna ? GO:0000786 ... Q5QNW6 31353180
    510937 6mup:M (3.5) BS01 dna ? GO:0007059 ... Q96H22 31353180
    510938 6mup:M (3.5) BS02 dna ? GO:0007059 ... Q96H22 31353180
    510939 6mup:N (3.5) BS01 dna ? GO:0007059 ... Q96H22 31353180
    510940 6mup:N (3.5) BS02 dna ? GO:0007059 ... Q96H22 31353180
    510941 6mur:A (3.1) BS01 rna 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 30503773
    510942 6mur:B (3.1) BS01 rna ? GO:0003723 ... B6YWB9 30503773
    510943 6mur:C (3.1) BS01 rna ? GO:0003723 ... B6YWC0 30503773
    510944 6mur:C (3.1) BS02 rna ? GO:0003723 ... B6YWC0 30503773
    510945 6mur:C (3.1) BS03 ZN ? GO:0003723 ... B6YWC0 30503773
    510946 6mur:D (3.1) BS01 rna ? GO:0003723 ... B6YWC0 30503773
    510947 6mur:D (3.1) BS02 rna ? GO:0003723 ... B6YWC0 30503773
    510948 6mur:D (3.1) BS03 ZN ? GO:0003723 ... B6YWC0 30503773
    510949 6mur:E (3.1) BS01 rna ? GO:0003723 ... B6YWC1 30503773
    510950 6mur:E (3.1) BS02 rna ? GO:0003723 ... B6YWC1 30503773
    510951 6mur:F (3.1) BS01 rna ? GO:0003723 ... B6YWC2 30503773
    510952 6mur:F (3.1) BS02 rna ? GO:0003723 ... B6YWC2 30503773
    510953 6mus:A (3.6) BS01 rna 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 30503773
    510954 6mus:A (3.6) BS02 ZN 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 30503773
    510955 6mus:B (3.6) BS01 rna ? GO:0003723 ... B6YWB9 30503773
    510956 6mus:C (3.6) BS01 rna ? GO:0003723 ... B6YWC0 30503773
    510957 6mus:C (3.6) BS02 rna ? GO:0003723 ... B6YWC0 30503773
    510958 6mus:C (3.6) BS03 ZN ? GO:0003723 ... B6YWC0 30503773
    510959 6mus:D (3.6) BS01 rna ? GO:0003723 ... B6YWC0 30503773
    510960 6mus:D (3.6) BS02 rna ? GO:0003723 ... B6YWC0 30503773
    510961 6mus:D (3.6) BS03 ZN ? GO:0003723 ... B6YWC0 30503773
    510962 6mus:E (3.6) BS01 rna ? GO:0003723 ... B6YWC1 30503773
    510963 6mus:F (3.6) BS01 rna ? GO:0003723 ... B6YWC2 30503773
    510964 6mus:F (3.6) BS02 rna ? GO:0003723 ... B6YWC2 30503773
    510965 6mus:J (3.6) BS01 rna ? GO:0003723 ... B6YWB9 30503773
    510966 6mus:K (3.6) BS01 rna ? GO:0003723 ... B6YWC0 30503773
    510967 6mus:K (3.6) BS02 rna ? GO:0003723 ... B6YWC0 30503773
    510968 6mus:K (3.6) BS03 ZN ? GO:0003723 ... B6YWC0 30503773
    510969 6mut:A (3.1) BS01 rna 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 30503773
    510970 6mut:C (3.1) BS01 rna ? GO:0003723 ... B6YWC0 30503773
    510971 6mut:C (3.1) BS02 rna ? GO:0003723 ... B6YWC0 30503773
    510972 6mut:C (3.1) BS03 ZN ? GO:0003723 ... B6YWC0 30503773
    510973 6mut:D (3.1) BS01 rna ? GO:0003723 ... B6YWC0 30503773
    510974 6mut:D (3.1) BS02 rna ? GO:0003723 ... B6YWC0 30503773
    510975 6mut:D (3.1) BS03 ZN ? GO:0003723 ... B6YWC0 30503773
    510976 6mut:E (3.1) BS01 rna ? GO:0003723 ... B6YWC1 30503773
    510977 6mut:E (3.1) BS02 rna ? GO:0003723 ... B6YWC1 30503773
    510978 6mut:F (3.1) BS01 rna ? GO:0003723 ... B6YWC2 30503773
    510979 6muu:A (3.0) BS01 ZN 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 30503773
    510980 6muu:C (3.0) BS01 rna ? GO:0003723 ... B6YWC0 30503773
    510981 6muu:C (3.0) BS02 ZN ? GO:0003723 ... B6YWC0 30503773
    510982 6muu:D (3.0) BS01 rna ? GO:0003723 ... B6YWC0 30503773
    510983 6muu:D (3.0) BS02 ZN ? GO:0003723 ... B6YWC0 30503773
    510984 6muu:E (3.0) BS01 rna ? GO:0003723 ... B6YWC1 30503773
    510985 6muu:F (3.0) BS01 rna ? GO:0003723 ... B6YWC2 30503773
    510986 6mv0:A (1.97) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 30867928
    510987 6mv1:A (2.15) BS01 FAD 1.6.2.2 GO:0016491 ... Q7L1T6 31282472
    510988 6mv1:A (2.15) BS02 NAD 1.6.2.2 GO:0016491 ... Q7L1T6 31282472
    510989 6mv2:A (2.05) BS01 FAD 1.6.2.2 GO:0016491 ... Q7L1T6 31282472
    510990 6mv2:A (2.05) BS02 NAP 1.6.2.2 GO:0016491 ... Q7L1T6 31282472
    510991 6mv3:A (-1.00) BS01 CA ? GO:0005509 ... P19429
    P63316
    30376637
    510992 6mv3:A (-1.00) BS02 WW7 ? GO:0005509 ... P19429
    P63316
    30376637
    510993 6mv4:H (1.37) BS01 SO4 3.4.21.22 GO:0004252 ... P00740 30725510
    510994 6mv4:H (1.37) BS02 SO4 3.4.21.22 GO:0004252 ... P00740 30725510
    510995 6mv4:H (1.37) BS03 SO4 3.4.21.22 GO:0004252 ... P00740 30725510
    510996 6mv4:H (1.37) BS04 PBZ 3.4.21.22 GO:0004252 ... P00740 30725510
    510997 6mv4:H (1.37) BS05 CA 3.4.21.22 GO:0004252 ... P00740 30725510
    510998 6mv4:H (1.37) BS06 NA 3.4.21.22 GO:0004252 ... P00740 30725510
    510999 6mv5:H (2.1) BS01 peptide N/A N/A N/A 30653992
    511000 6mv5:L (2.1) BS01 peptide ? N/A A0A097PUG4 30653992

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).