SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    51001 1sri:A (1.65) BS01 DMB ? GO:0009374 ... P22629 N/A MOAD: Ka=1200000M^-1
    51002 1sri:B (1.65) BS01 DMB ? GO:0009374 ... P22629 N/A MOAD: Ka=1200000M^-1
    51003 1srj:A (1.8) BS01 NAB ? GO:0009374 ... P22629 N/A
    51004 1srj:B (1.8) BS01 NAB ? GO:0009374 ... P22629 N/A
    51005 1srk:A (-1.00) BS01 ZN ? GO:0006357 ... O35615 15234987
    51006 1srn:A (1.8) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 3680234
    51007 1srp:A (2.0) BS01 CA 3.4.24.40 GO:0004222 ... P07268 8797082
    51008 1srp:A (2.0) BS02 CA 3.4.24.40 GO:0004222 ... P07268 8797082
    51009 1srp:A (2.0) BS03 CA 3.4.24.40 GO:0004222 ... P07268 8797082
    51010 1srp:A (2.0) BS04 CA 3.4.24.40 GO:0004222 ... P07268 8797082
    51011 1srp:A (2.0) BS05 CA 3.4.24.40 GO:0004222 ... P07268 8797082
    51012 1srp:A (2.0) BS06 CA 3.4.24.40 GO:0004222 ... P07268 8797082
    51013 1srp:A (2.0) BS07 CA 3.4.24.40 GO:0004222 ... P07268 8797082
    51014 1srp:A (2.0) BS08 ZN 3.4.24.40 GO:0004222 ... P07268 8797082
    51015 1srr:A (1.9) BS01 CA 2.7.-.- GO:0000156 ... P06628 8805550
    51016 1srr:C (1.9) BS01 CA 2.7.-.- GO:0000156 ... P06628 8805550
    51017 1srs:A (3.2) BS01 dna ? GO:0000981 ... P11831 7637780
    51018 1srs:A (3.2) BS02 dna ? GO:0000981 ... P11831 7637780
    51019 1srs:B (3.2) BS01 dna ? GO:0000981 ... P11831 7637780
    51020 1srs:B (3.2) BS02 dna ? GO:0000981 ... P11831 7637780
    51021 1ss4:B (1.84) BS01 GSH ? GO:0004493 ... Q81F54 N/A
    51022 1ss9:A (2.6) BS01 MN 2.4.1.44 GO:0016757 ... Q93EK7 15075344
    51023 1ss9:A (2.6) BS02 UPF 2.4.1.44 GO:0016757 ... Q93EK7 15075344
    51024 1ssa:A (2.0) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 8142897
    51025 1ssb:A (2.0) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 8142897
    51026 1ssc:A (2.0) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 15299768
    51027 1ssg:A (2.9) BS01 PGA 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 15166315
    51028 1ssg:B (2.9) BS01 PGA 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 15166315
    51029 1ssh:A (1.4) BS01 peptide ? GO:0006897 ... P43603 N/A
    51030 1ssp:E (1.9) BS01 dna 3.2.2.27 GO:0004844 ... P13051 9724657
    51031 1ssp:E (1.9) BS02 URA 3.2.2.27 GO:0004844 ... P13051 9724657
    51032 1ssq:A (1.85) BS01 CYS 2.3.1.30 GO:0005737 ... P43886 15147185 MOAD: Ki=1uM
    51033 1ssq:D (1.85) BS01 CYS 2.3.1.30 GO:0005737 ... P43886 15147185
    51034 1sst:A (2.0) BS01 COA 2.3.1.30 GO:0005737 ... P43886 15147185
    51035 1sst:A (2.0) BS02 COA 2.3.1.30 GO:0005737 ... P43886 15147185
    51036 1sst:B (2.0) BS01 COA 2.3.1.30 GO:0005737 ... P43886 15147185
    51037 1sst:B (2.0) BS02 COA 2.3.1.30 GO:0005737 ... P43886 15147185
    51038 1sst:C (2.0) BS01 COA 2.3.1.30 GO:0005737 ... P43886 15147185
    51039 1sst:C (2.0) BS02 COA 2.3.1.30 GO:0005737 ... P43886 15147185
    51040 1ssx:A (0.83) BS01 SO4 3.4.21.12 GO:0004252 ... P00778 15111063
    51041 1ssx:A (0.83) BS02 SO4 3.4.21.12 GO:0004252 ... P00778 15111063
    51042 1ssx:A (0.83) BS03 SO4 3.4.21.12 GO:0004252 ... P00778 15111063
    51043 1st0:A (1.9) BS01 GTG 3.6.1.59 GO:0000288 ... Q96C86 15068804
    51044 1st0:B (1.9) BS01 GTG 3.6.1.59 GO:0000288 ... Q96C86 15068804
    51045 1st0:B (1.9) BS02 GTG 3.6.1.59 GO:0000288 ... Q96C86 15068804
    51046 1st2:A (2.0) BS01 CA 3.4.21.62 GO:0004252 ... P00782 3286644
    51047 1st2:A (2.0) BS02 CA 3.4.21.62 GO:0004252 ... P00782 3286644
    51048 1st3:A (1.4) BS01 CA 3.4.21.62 GO:0004252 ... P29599 1453465
    51049 1st3:A (1.4) BS02 CA 3.4.21.62 GO:0004252 ... P29599 1453465
    51050 1st4:A (2.02) BS01 GTA 3.6.1.59 GO:0000288 ... Q96C86 15068804
    51051 1st4:B (2.02) BS01 GTA 3.6.1.59 GO:0000288 ... Q96C86 15068804
    51052 1st4:B (2.02) BS02 GTA 3.6.1.59 GO:0000288 ... Q96C86 15068804
    51053 1sta:A (1.7) BS01 CA 3.1.31.1 GO:0003676 ... P00644 8019410
    51054 1sta:A (1.7) BS02 THP 3.1.31.1 GO:0003676 ... P00644 8019410
    51055 1stb:A (2.0) BS01 CA 3.1.31.1 GO:0003676 ... P00644 8019410
    51056 1stb:A (2.0) BS02 THP 3.1.31.1 GO:0003676 ... P00644 8019410
    51057 1stc:E (2.3) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 9438863
    51058 1stc:E (2.3) BS02 STU 2.7.11.11 GO:0000287 ... P00517 9438863 MOAD: Ki=8nM
    51059 1std:A (2.9) BS01 BFS 4.2.1.94 GO:0005768 ... P56221 7866745 BindingDB: Ki=47nM
    51060 1ste:A (2.0) BS01 ZN ? GO:0005576 ... P34071 7582894
    51061 1stg:A (1.7) BS01 THP 3.1.31.1 GO:0003676 ... P00644 7703245
    51062 1sth:A (1.85) BS01 CO 3.1.31.1 GO:0003676 ... P00644 7703245
    51063 1sth:A (1.85) BS02 THP 3.1.31.1 GO:0003676 ... P00644 7703245
    51064 1sto:A (2.6) BS01 OMP 2.4.2.10 GO:0000287 ... P08870 8312245
    51065 1stp:A (2.6) BS01 BTN ? GO:0005576 ... P22629 2911722 BindingDB: Kd=1.000000nM
    51066 1stq:A (1.82) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 15236591
    51067 1str:B (1.8) BS01 peptide ? GO:0009374 ... P22629 8537386
    51068 1str:D (1.8) BS01 peptide ? GO:0009374 ... P22629 8537386
    51069 1sts:B (1.95) BS01 peptide ? GO:0009374 ... P22629 8537386
    51070 1sts:D (1.95) BS01 peptide ? GO:0009374 ... P22629 8537386
    51071 1stx:A (2.1) BS01 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51072 1stx:A (2.1) BS02 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51073 1stx:A (2.1) BS03 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51074 1stx:A (2.1) BS04 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51075 1stx:A (2.1) BS05 MN 3.1.21.4 GO:0003677 ... P04390 15170321
    51076 1stx:A (2.1) BS06 MN 3.1.21.4 GO:0003677 ... P04390 15170321
    51077 1stx:A (2.1) BS07 MN 3.1.21.4 GO:0003677 ... P04390 15170321
    51078 1stx:A (2.1) BS08 MN 3.1.21.4 GO:0003677 ... P04390 15170321
    51079 1stx:B (2.1) BS01 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51080 1stx:B (2.1) BS02 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51081 1stx:B (2.1) BS03 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51082 1stx:B (2.1) BS04 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51083 1stx:B (2.1) BS05 MN 3.1.21.4 GO:0003677 ... P04390 15170321
    51084 1stx:B (2.1) BS06 MN 3.1.21.4 GO:0003677 ... P04390 15170321
    51085 1sty:A (1.67) BS01 CA 3.1.31.1 GO:0003676 ... P00644 8475069
    51086 1sty:A (1.67) BS02 THP 3.1.31.1 GO:0003676 ... P00644 8475069
    51087 1su0:B (2.3) BS01 ZN ? GO:0005506 ... Q9A1G2 15815978
    51088 1su1:A (2.25) BS01 ZN 3.1.4.- GO:0005829 ... P67095 17586769
    51089 1su1:A (2.25) BS02 ZN 3.1.4.- GO:0005829 ... P67095 17586769
    51090 1su1:A (2.25) BS03 SO4 3.1.4.- GO:0005829 ... P67095 17586769
    51091 1su1:B (2.25) BS01 ZN 3.1.4.- GO:0005829 ... P67095 17586769
    51092 1su1:B (2.25) BS02 ZN 3.1.4.- GO:0005829 ... P67095 17586769
    51093 1su1:B (2.25) BS03 SO4 3.1.4.- GO:0005829 ... P67095 17586769
    51094 1su1:C (2.25) BS01 ZN 3.1.4.- GO:0005829 ... P67095 17586769
    51095 1su1:C (2.25) BS02 ZN 3.1.4.- GO:0005829 ... P67095 17586769
    51096 1su1:C (2.25) BS03 SO4 3.1.4.- GO:0005829 ... P67095 17586769
    51097 1su1:C (2.25) BS04 SO4 3.1.4.- GO:0005829 ... P67095 17586769
    51098 1su1:D (2.25) BS01 ZN 3.1.4.- GO:0005829 ... P67095 17586769
    51099 1su1:D (2.25) BS02 ZN 3.1.4.- GO:0005829 ... P67095 17586769
    51100 1su1:D (2.25) BS03 SO4 3.1.4.- GO:0005829 ... P67095 17586769
    51101 1su1:D (2.25) BS04 SO4 3.1.4.- GO:0005829 ... P67095 17586769
    51102 1su2:A (1.6) BS01 MG 3.6.1.61
    3.6.1.69
    GO:0008413 ... Q9RVK2 15123424
    51103 1su2:A (1.6) BS02 MG 3.6.1.61
    3.6.1.69
    GO:0008413 ... Q9RVK2 15123424
    51104 1su2:A (1.6) BS03 ATP 3.6.1.61
    3.6.1.69
    GO:0008413 ... Q9RVK2 15123424
    51105 1su2:A (1.6) BS04 ATP 3.6.1.61
    3.6.1.69
    GO:0008413 ... Q9RVK2 15123424
    51106 1su2:B (1.6) BS01 ATP 3.6.1.61
    3.6.1.69
    GO:0008413 ... Q9RVK2 15123424
    51107 1su2:B (1.6) BS02 MG 3.6.1.61
    3.6.1.69
    GO:0008413 ... Q9RVK2 15123424
    51108 1su2:B (1.6) BS03 MG 3.6.1.61
    3.6.1.69
    GO:0008413 ... Q9RVK2 15123424
    51109 1su2:B (1.6) BS04 ATP 3.6.1.61
    3.6.1.69
    GO:0008413 ... Q9RVK2 15123424
    51110 1su3:A (2.2) BS01 CA 3.4.24.7 GO:0004175 ... P03956 15611040
    51111 1su3:A (2.2) BS02 CA 3.4.24.7 GO:0004175 ... P03956 15611040
    51112 1su3:A (2.2) BS03 CA 3.4.24.7 GO:0004175 ... P03956 15611040
    51113 1su3:A (2.2) BS04 CA 3.4.24.7 GO:0004175 ... P03956 15611040
    51114 1su3:A (2.2) BS05 ZN 3.4.24.7 GO:0004175 ... P03956 15611040
    51115 1su3:A (2.2) BS06 ZN 3.4.24.7 GO:0004175 ... P03956 15611040
    51116 1su3:B (2.2) BS01 CA 3.4.24.7 GO:0004175 ... P03956 15611040
    51117 1su3:B (2.2) BS02 CA 3.4.24.7 GO:0004175 ... P03956 15611040
    51118 1su3:B (2.2) BS03 CA 3.4.24.7 GO:0004175 ... P03956 15611040
    51119 1su3:B (2.2) BS04 CA 3.4.24.7 GO:0004175 ... P03956 15611040
    51120 1su3:B (2.2) BS05 ZN 3.4.24.7 GO:0004175 ... P03956 15611040
    51121 1su3:B (2.2) BS06 ZN 3.4.24.7 GO:0004175 ... P03956 15611040
    51122 1su4:A (2.4) BS01 CA 7.2.2.10 GO:0000166 ... P04191 10864315
    51123 1su4:A (2.4) BS02 CA 7.2.2.10 GO:0000166 ... P04191 10864315
    51124 1su5:A (2.7) BS01 PGA 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 15166315
    51125 1su5:B (2.7) BS01 PGA 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 15166315
    51126 1su6:A (1.64) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51127 1su6:A (1.64) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51128 1su6:A (1.64) BS03 NFS 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51129 1su7:A (1.12) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51130 1su7:A (1.12) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51131 1su7:A (1.12) BS03 NFS 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51132 1su8:A (1.1) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51133 1su8:A (1.1) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51134 1su8:A (1.1) BS03 NFS 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51135 1sua:A (2.1) BS01 peptide 3.4.21.62 GO:0004252 ... P00782 9552156
    51136 1sub:A (1.75) BS01 CA 3.4.21.62 GO:0004252 ... P00782 8332608
    51137 1sud:A (1.9) BS01 CA 3.4.21.62 GO:0004252 ... P00782 8332608
    51138 1sud:A (1.9) BS02 CA 3.4.21.62 GO:0004252 ... P00782 8332608
    51139 1sue:A (1.8) BS01 DFP 3.4.21.62 GO:0004252 ... P00782 N/A
    51140 1suf:A (1.15) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51141 1suf:A (1.15) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51142 1suf:A (1.15) BS03 NFS 1.2.7.4 GO:0003824 ... Q9F8A8 15113209
    51143 1sui:A (2.7) BS01 CA 2.1.1.104 GO:0008171 ... Q40313 15734921
    51144 1sui:A (2.7) BS02 SAH 2.1.1.104 GO:0008171 ... Q40313 15734921
    51145 1sui:A (2.7) BS03 FRE 2.1.1.104 GO:0008171 ... Q40313 15734921
    51146 1sui:B (2.7) BS01 CA 2.1.1.104 GO:0008171 ... Q40313 15734921
    51147 1sui:B (2.7) BS02 SAH 2.1.1.104 GO:0008171 ... Q40313 15734921
    51148 1sui:C (2.7) BS01 CA 2.1.1.104 GO:0008171 ... Q40313 15734921
    51149 1sui:C (2.7) BS02 SAH 2.1.1.104 GO:0008171 ... Q40313 15734921
    51150 1sui:D (2.7) BS01 CA 2.1.1.104 GO:0008171 ... Q40313 15734921
    51151 1sui:D (2.7) BS02 SAH 2.1.1.104 GO:0008171 ... Q40313 15734921
    51152 1sum:B (2.0) BS01 FE ? GO:0005737 ... Q9X256 15716271
    51153 1sum:B (2.0) BS02 FE ? GO:0005737 ... Q9X256 15716271
    51154 1sum:B (2.0) BS03 FE ? GO:0005737 ... Q9X256 15716271
    51155 1sum:B (2.0) BS04 FE ? GO:0005737 ... Q9X256 15716271
    51156 1sum:B (2.0) BS05 FE ? GO:0005737 ... Q9X256 15716271
    51157 1sum:B (2.0) BS06 FE ? GO:0005737 ... Q9X256 15716271
    51158 1sum:B (2.0) BS07 FE ? GO:0005737 ... Q9X256 15716271
    51159 1sum:B (2.0) BS08 PO3 ? GO:0005737 ... Q9X256 15716271
    51160 1sum:B (2.0) BS09 PO3 ? GO:0005737 ... Q9X256 15716271
    51161 1suo:A (1.9) BS01 HEM 1.14.14.1 GO:0004497 ... P00178 15100217
    51162 1suo:A (1.9) BS02 CPZ 1.14.14.1 GO:0004497 ... P00178 15100217 MOAD: ic50=0.04uM
    51163 1sup:A (1.6) BS01 CA 3.4.21.62 GO:0004252 ... P00782 15299573
    51164 1suq:A (3.0) BS01 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 15115397
    51165 1suq:A (3.0) BS02 185 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 15115397
    51166 1sus:A (2.7) BS01 CA 2.1.1.104 GO:0008171 ... Q40313 15734921
    51167 1sus:A (2.7) BS02 SAH 2.1.1.104 GO:0008171 ... Q40313 15734921
    51168 1sus:A (2.7) BS03 SPF 2.1.1.104 GO:0008171 ... Q40313 15734921
    51169 1sus:B (2.7) BS01 CA 2.1.1.104 GO:0008171 ... Q40313 15734921
    51170 1sus:B (2.7) BS02 SAH 2.1.1.104 GO:0008171 ... Q40313 15734921
    51171 1sus:C (2.7) BS01 CA 2.1.1.104 GO:0008171 ... Q40313 15734921
    51172 1sus:C (2.7) BS02 SAH 2.1.1.104 GO:0008171 ... Q40313 15734921
    51173 1sus:D (2.7) BS01 CA 2.1.1.104 GO:0008171 ... Q40313 15734921
    51174 1sus:D (2.7) BS02 SAH 2.1.1.104 GO:0008171 ... Q40313 15734921
    51175 1suv:C (7.5) BS01 CO3 ? GO:0005576 ... P02787 14980223
    51176 1suv:C (7.5) BS02 FE ? GO:0005576 ... P02787 14980223
    51177 1suv:D (7.5) BS01 CO3 ? GO:0005576 ... P02787 14980223
    51178 1suv:D (7.5) BS02 FE ? GO:0005576 ... P02787 14980223
    51179 1suv:E (7.5) BS01 CO3 N/A GO:0005576 ... N/A 14980223
    51180 1suv:E (7.5) BS02 FE N/A GO:0005576 ... N/A 14980223
    51181 1suv:F (7.5) BS01 CO3 N/A GO:0005576 ... N/A 14980223
    51182 1suv:F (7.5) BS02 FE N/A GO:0005576 ... N/A 14980223
    51183 1suw:A (2.45) BS01 NAP 2.7.1.23 GO:0003951 ... O30297 16242716
    51184 1suw:A (2.45) BS02 NAP 2.7.1.23 GO:0003951 ... O30297 16242716
    51185 1suw:B (2.45) BS01 NAP 2.7.1.23 GO:0003951 ... O30297 16242716
    51186 1suw:B (2.45) BS02 NAP 2.7.1.23 GO:0003951 ... O30297 16242716
    51187 1suw:C (2.45) BS01 NAP 2.7.1.23 GO:0003951 ... O30297 16242716
    51188 1suw:C (2.45) BS02 NAP 2.7.1.23 GO:0003951 ... O30297 16242716
    51189 1suw:D (2.45) BS01 NAP 2.7.1.23 GO:0003951 ... O30297 16242716
    51190 1suw:D (2.45) BS02 NAP 2.7.1.23 GO:0003951 ... O30297 16242716
    51191 1suz:A (1.8) BS01 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51192 1suz:A (1.8) BS02 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51193 1suz:A (1.8) BS03 MG 3.1.21.4 GO:0003677 ... P04390 15170321
    51194 1suz:A (1.8) BS04 NA 3.1.21.4 GO:0003677 ... P04390 15170321
    51195 1suz:B (1.8) BS01 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51196 1suz:B (1.8) BS02 dna 3.1.21.4 GO:0003677 ... P04390 15170321
    51197 1suz:B (1.8) BS03 MG 3.1.21.4 GO:0003677 ... P04390 15170321
    51198 1suz:B (1.8) BS04 NA 3.1.21.4 GO:0003677 ... P04390 15170321
    51199 1sv2:A (3.0) BS01 ZN 3.5.1.88 GO:0005737 ... Q93LE9 16239225
    51200 1sv2:B (3.0) BS01 ZN 3.5.1.88 GO:0005737 ... Q93LE9 16239225

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).