SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    53201 1tnz:H (2.9) BS03 MGM 2.5.1.59 GO:0003824 ... P53610 15451670
    53202 1tnz:I (2.9) BS01 peptide 2.5.1.58
    2.5.1.59
    GO:0004660 ... Q04631 15451670
    53203 1tnz:I (2.9) BS02 MGM 2.5.1.58
    2.5.1.59
    GO:0004660 ... Q04631 15451670
    53204 1tnz:J (2.9) BS01 peptide 2.5.1.59 GO:0003824 ... P53610 15451670
    53205 1tnz:J (2.9) BS02 ZN 2.5.1.59 GO:0003824 ... P53610 15451670
    53206 1tnz:J (2.9) BS03 MGM 2.5.1.59 GO:0003824 ... P53610 15451670
    53207 1tnz:K (2.9) BS01 MGM 2.5.1.58
    2.5.1.59
    GO:0004660 ... Q04631 15451670
    53208 1tnz:L (2.9) BS01 peptide 2.5.1.59 GO:0003824 ... P53610 15451670
    53209 1tnz:L (2.9) BS02 ZN 2.5.1.59 GO:0003824 ... P53610 15451670
    53210 1tnz:L (2.9) BS03 MGM 2.5.1.59 GO:0003824 ... P53610 15451670
    53211 1to1:E (1.68) BS01 CA 3.4.21.62 GO:0004252 ... P00782 15504027
    53212 1to2:E (1.3) BS01 CA 3.4.21.62 GO:0004252 ... P00782 15504027
    53213 1to4:A (1.55) BS01 CU 1.15.1.1 GO:0004784 ... Q01137 15333927
    53214 1to4:A (1.55) BS02 ZN 1.15.1.1 GO:0004784 ... Q01137 15333927
    53215 1to4:B (1.55) BS01 CU 1.15.1.1 GO:0004784 ... Q01137 15333927
    53216 1to4:B (1.55) BS02 ZN 1.15.1.1 GO:0004784 ... Q01137 15333927
    53217 1to4:C (1.55) BS01 CU 1.15.1.1 GO:0004784 ... Q01137 15333927
    53218 1to4:C (1.55) BS02 ZN 1.15.1.1 GO:0004784 ... Q01137 15333927
    53219 1to4:D (1.55) BS01 CU 1.15.1.1 GO:0004784 ... Q01137 15333927
    53220 1to4:D (1.55) BS02 ZN 1.15.1.1 GO:0004784 ... Q01137 15333927
    53221 1to5:A (2.2) BS01 ZN 1.15.1.1 GO:0004784 ... Q01137 15333927
    53222 1to5:A (2.2) BS02 CU 1.15.1.1 GO:0004784 ... Q01137 15333927
    53223 1to5:B (2.2) BS01 ZN 1.15.1.1 GO:0004784 ... Q01137 15333927
    53224 1to5:B (2.2) BS02 CU 1.15.1.1 GO:0004784 ... Q01137 15333927
    53225 1to5:C (2.2) BS01 ZN 1.15.1.1 GO:0004784 ... Q01137 15333927
    53226 1to5:C (2.2) BS02 CU 1.15.1.1 GO:0004784 ... Q01137 15333927
    53227 1to5:D (2.2) BS01 ZN 1.15.1.1 GO:0004784 ... Q01137 15333927
    53228 1to5:D (2.2) BS02 CU 1.15.1.1 GO:0004784 ... Q01137 15333927
    53229 1to9:A (2.4) BS01 HMH 3.5.99.2 GO:0005829 ... P25052 N/A
    53230 1to9:B (2.4) BS01 HMH 3.5.99.2 GO:0005829 ... P25052 N/A
    53231 1toa:A (1.8) BS01 ZN ? GO:0007155 ... P96116 10404217
    53232 1toa:B (1.8) BS01 ZN ? GO:0007155 ... P96116 10404217
    53233 1toc:B (3.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00735 8947023
    53234 1toc:D (3.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00735 8947023
    53235 1toc:F (3.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00735 8947023
    53236 1toc:H (3.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00735 8947023
    53237 1tog:A (2.31) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.6mM
    53238 1tog:B (2.31) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.6mM
    53239 1tog:B (2.31) BS02 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.6mM
    53240 1toh:A (2.3) BS01 FE 1.14.16.2 GO:0004497 ... P04177 9228951
    53241 1toi:A (1.9) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.09mM
    53242 1toj:A (1.9) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.41mM
    53243 1tom:H (1.8) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 N/A
    53244 1tom:H (1.8) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 N/A
    53245 1tom:H (1.8) BS03 MIN 3.4.21.5 GO:0004252 ... P00734 N/A MOAD: Ki=5nM
    BindingDB: Ki=5nM, IC50=6nM
    53246 1ton:A (1.8) BS01 ZN 3.4.21.35 GO:0003073 ... P00759 2821276
    53247 1top:A (1.78) BS01 CA ? GO:0003009 ... P02588 15299475
    53248 1top:A (1.78) BS02 CA ? GO:0003009 ... P02588 15299475
    53249 1toq:A (2.5) BS01 peptide ? GO:0019862 ... P18670 15272163
    53250 1toq:A (2.5) BS02 peptide ? GO:0019862 ... P18670 15272163
    53251 1toq:A (2.5) BS03 peptide ? GO:0019862 ... P18670 15272163
    53252 1toq:A (2.5) BS04 AMG ? GO:0019862 ... P18670 15272163
    53253 1toq:C (2.5) BS01 peptide ? GO:0019862 ... P18670 15272163
    53254 1toq:C (2.5) BS02 peptide ? GO:0019862 ... P18670 15272163
    53255 1toq:C (2.5) BS03 peptide ? GO:0019862 ... P18670 15272163
    53256 1toq:C (2.5) BS04 AMG ? GO:0019862 ... P18670 15272163
    53257 1toq:E (2.5) BS01 peptide ? GO:0019862 ... P18670 15272163
    53258 1toq:E (2.5) BS02 peptide ? GO:0019862 ... P18670 15272163
    53259 1toq:E (2.5) BS03 peptide ? GO:0019862 ... P18670 15272163
    53260 1toq:E (2.5) BS04 AMG ? GO:0019862 ... P18670 15272163
    53261 1toq:G (2.5) BS01 peptide ? GO:0019862 ... P18670 15272163
    53262 1toq:G (2.5) BS02 peptide ? GO:0019862 ... P18670 15272163
    53263 1toq:G (2.5) BS03 peptide ? GO:0019862 ... P18670 15272163
    53264 1toq:G (2.5) BS04 AMG ? GO:0019862 ... P18670 15272163
    53265 1tot:A (-1.00) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 15476823
    53266 1tot:A (-1.00) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 15476823
    53267 1tou:A (2.0) BS01 B1V ? GO:0005319 ... P15090 15357970 MOAD: ic50=1uM
    53268 1tow:A (2.0) BS01 CRZ ? GO:0005319 ... P15090 15357969 MOAD: ic50=0.57uM
    BindingDB: IC50=570.0nM
    53269 1tox:A (2.3) BS01 NAD 2.4.2.36 GO:0005576 ... P00588 8573568 MOAD: Kd=10uM
    53270 1tox:B (2.3) BS01 NAD 2.4.2.36 GO:0005576 ... P00588 8573568 MOAD: Kd=10uM
    53271 1tp2:A (2.4) BS01 TDA 3.1.1.4 GO:0004623 ... P59071 N/A
    53272 1tp2:B (2.4) BS01 TDA 3.1.1.4 GO:0004623 ... P59071 N/A
    53273 1tp3:A (1.99) BS01 peptide ? N/A P31016 N/A
    53274 1tp5:A (1.54) BS01 peptide ? N/A P31016 N/A
    53275 1tp7:A (2.4) BS01 DMX 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... Q82122 15596823
    53276 1tp8:A (3.0) BS01 peptide ? GO:0019862 ... P18670 15272163
    53277 1tp8:A (3.0) BS02 peptide ? GO:0019862 ... P18670 15272163
    53278 1tp8:A (3.0) BS03 peptide ? GO:0019862 ... P18670 15272163
    53279 1tp8:A (3.0) BS04 AMG ? GO:0019862 ... P18670 15272163
    53280 1tp8:C (3.0) BS01 peptide ? GO:0019862 ... P18670 15272163
    53281 1tp8:C (3.0) BS02 peptide ? GO:0019862 ... P18670 15272163
    53282 1tp8:C (3.0) BS03 peptide ? GO:0019862 ... P18670 15272163
    53283 1tp8:C (3.0) BS04 AMG ? GO:0019862 ... P18670 15272163
    53284 1tp8:E (3.0) BS01 peptide ? GO:0019862 ... P18670 15272163
    53285 1tp8:E (3.0) BS02 peptide ? GO:0019862 ... P18670 15272163
    53286 1tp8:E (3.0) BS03 peptide ? GO:0019862 ... P18670 15272163
    53287 1tp8:E (3.0) BS04 AMG ? GO:0019862 ... P18670 15272163
    53288 1tp8:G (3.0) BS01 peptide ? GO:0019862 ... P18670 15272163
    53289 1tp8:G (3.0) BS02 peptide ? GO:0019862 ... P18670 15272163
    53290 1tp8:G (3.0) BS03 peptide ? GO:0019862 ... P18670 15272163
    53291 1tp8:G (3.0) BS04 AMG ? GO:0019862 ... P18670 15272163
    53292 1tpa:E (1.9) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    53293 1tpb:1 (1.9) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 7577950
    53294 1tpb:2 (1.9) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 7577950
    53295 1tpc:1 (1.9) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 7577950
    53296 1tpc:2 (1.9) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 7577950
    53297 1tph:1 (1.8) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 8130195
    53298 1tph:2 (1.8) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 8130195
    53299 1tpo:A (1.7) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    53300 1tpp:A (1.4) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    53301 1tpp:A (1.4) BS02 APA 3.4.21.4 GO:0004175 ... P00760 N/A
    53302 1tps:A (1.9) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 9383379
    53303 1tps:A (1.9) BS02 CA 3.4.21.4 GO:0004175 ... P00760 9383379
    53304 1tpu:A (1.9) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 8952501
    53305 1tpu:B (1.9) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 8952501
    53306 1tpv:A (1.9) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 8952501
    53307 1tpv:B (1.9) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 8952501
    53308 1tpw:A (1.9) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 10194358 MOAD: Ki=0.5mM
    53309 1tpw:B (1.9) BS01 PGH 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00940 10194358 MOAD: Ki=0.5mM
    53310 1tpy:A (2.2) BS01 CO3 2.1.1.79 GO:0005515 ... Q79FX6 N/A
    53311 1tpy:A (2.2) BS02 SAH 2.1.1.79 GO:0005515 ... Q79FX6 N/A
    53312 1tpy:A (2.2) BS03 16A 2.1.1.79 GO:0005515 ... Q79FX6 N/A
    53313 1tpz:A (2.0) BS01 GDP 3.6.5.- GO:0000045 ... Q9QZ85 15350217 MOAD: Kd=0.64uM
    53314 1tpz:B (2.0) BS01 GDP 3.6.5.- GO:0000045 ... Q9QZ85 15350217 MOAD: Kd=0.64uM
    53315 1tq0:D (2.8) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 15252033
    53316 1tq2:A (2.7) BS01 GNP 3.6.5.- GO:0000045 ... Q9QZ85 15350217
    53317 1tq2:B (2.7) BS01 GNP 3.6.5.- GO:0000045 ... Q9QZ85 15350217
    53318 1tq4:A (1.95) BS01 GDP 3.6.5.- GO:0000045 ... Q9QZ85 15350217 MOAD: Kd=0.64uM
    53319 1tq6:A (2.7) BS01 MG 3.6.5.- GO:0000045 ... Q9QZ85 15350217
    53320 1tq6:A (2.7) BS02 GNP 3.6.5.- GO:0000045 ... Q9QZ85 15350217
    53321 1tq7:B (2.4) BS01 0G6 3.4.21.5 GO:0004252 ... P00734 15252033
    53322 1tq7:B (2.4) BS02 ZN 3.4.21.5 GO:0004252 ... P00734 15252033
    53323 1tq9:A (2.0) BS01 CPA 4.6.1.18 GO:0003676 ... P00669 15192098
    53324 1tq9:A (2.0) BS02 CPA 4.6.1.18 GO:0003676 ... P00669 15192098
    53325 1tq9:B (2.0) BS01 CPA 4.6.1.18 GO:0003676 ... P00669 15192098
    53326 1tqe:P (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413
    53327 1tqe:P (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413
    53328 1tqe:P (2.7) BS03 peptide ? GO:0000977 ... Q02080 15567413
    53329 1tqe:Q (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413
    53330 1tqe:Q (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413
    53331 1tqe:Q (2.7) BS03 peptide ? GO:0000977 ... Q02080 15567413
    53332 1tqe:R (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413
    53333 1tqe:R (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413
    53334 1tqe:R (2.7) BS03 peptide ? GO:0000977 ... Q02080 15567413
    53335 1tqe:S (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413
    53336 1tqe:S (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413
    53337 1tqe:S (2.7) BS03 peptide ? GO:0000977 ... Q02080 15567413
    53338 1tqf:A (1.8) BS01 32P 3.4.23.46 GO:0004190 ... P56817 15566281 MOAD: ic50=1.4uM
    BindingDB: IC50=1400nM
    53339 1tqh:A (1.63) BS01 4PA 3.1.1.1 GO:0052689 ... Q06174 15327954
    53340 1tqm:A (1.99) BS01 ANP 2.7.11.1 GO:0003824 ... O30245 15341724
    53341 1tqn:A (2.05) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 15258162
    53342 1tqp:A (2.1) BS01 ATP 2.7.11.1 GO:0003824 ... O30245 15341724
    53343 1tqs:A (1.3) BS01 ZN 3.2.1.114 GO:0000139 ... Q24451 N/A
    53344 1tqs:A (1.3) BS02 SSO 3.2.1.114 GO:0000139 ... Q24451 N/A
    53345 1tqt:A (1.9) BS01 ZN 3.2.1.114 GO:0000139 ... Q24451 N/A
    53346 1tqt:A (1.9) BS02 SSD 3.2.1.114 GO:0000139 ... Q24451 N/A MOAD: ic50~7.5mM
    53347 1tqu:A (2.03) BS01 ZN 3.2.1.114 GO:0000139 ... Q24451 N/A
    53348 1tqu:A (2.03) BS02 GHA 3.2.1.114 GO:0000139 ... Q24451 N/A MOAD: ic50~7.5mM
    53349 1tqv:A (2.03) BS01 ZN 3.2.1.114 GO:0000139 ... Q24451 N/A
    53350 1tqv:A (2.03) BS02 SSE 3.2.1.114 GO:0000139 ... Q24451 N/A MOAD: ic50~7.5mM
    53351 1tqw:A (1.2) BS01 ZN 3.2.1.114 GO:0000139 ... Q24451 N/A
    53352 1tqw:A (1.2) BS02 BLT 3.2.1.114 GO:0000139 ... Q24451 N/A MOAD: ic50~7.5mM
    53353 1tqx:A (2.0) BS01 SO4 5.1.3.1 GO:0004750 ... Q8I5L3 16304640
    53354 1tqx:A (2.0) BS02 ZN 5.1.3.1 GO:0004750 ... Q8I5L3 16304640
    53355 1tqx:B (2.0) BS01 SO4 5.1.3.1 GO:0004750 ... Q8I5L3 16304640
    53356 1tqx:B (2.0) BS02 ZN 5.1.3.1 GO:0004750 ... Q8I5L3 16304640
    53357 1tqy:A (2.0) BS01 MG 2.3.1.- GO:0004315 ... Q02059 15286722
    53358 1tqy:C (2.0) BS01 MG 2.3.1.- GO:0004315 ... Q02059 15286722
    53359 1tqy:E (2.0) BS01 MG 2.3.1.- GO:0004315 ... Q02059 15286722
    53360 1tqy:G (2.0) BS01 MG 2.3.1.- GO:0004315 ... Q02059 15286722
    53361 1tr5:A (2.1) BS01 CA 3.1.31.1 GO:0003676 ... P00644 15276844
    53362 1tr5:A (2.1) BS02 THP 3.1.31.1 GO:0003676 ... P00644 15276844
    53363 1tr7:A (2.1) BS01 DEG ? GO:0007155 ... P08191 15659162 MOAD: Kd=0.15uM
    53364 1tr7:B (2.1) BS01 DEG ? GO:0007155 ... P08191 15659162 MOAD: Kd=0.15uM
    53365 1trb:A (2.0) BS01 FAD 1.8.1.9 GO:0004791 ... P0A9P4 2067578
    53366 1trd:B (2.5) BS01 PGH 5.3.1.1 GO:0004807 ... P04789 8356028 MOAD: Ki=4uM
    53367 1trg:A (1.9) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 9687366
    53368 1trk:A (2.0) BS01 CA 2.2.1.1 GO:0004802 ... P23254 8176731
    53369 1trk:A (2.0) BS02 TPP 2.2.1.1 GO:0004802 ... P23254 8176731
    53370 1trk:A (2.0) BS03 TPP 2.2.1.1 GO:0004802 ... P23254 8176731
    53371 1trk:B (2.0) BS01 TPP 2.2.1.1 GO:0004802 ... P23254 8176731
    53372 1trk:B (2.0) BS02 CA 2.2.1.1 GO:0004802 ... P23254 8176731
    53373 1trk:B (2.0) BS03 TPP 2.2.1.1 GO:0004802 ... P23254 8176731
    53374 1trm:A (2.3) BS01 CA 3.4.21.4 GO:0004252 ... P00763 3112942
    53375 1trm:B (2.3) BS01 CA 3.4.21.4 GO:0004252 ... P00763 3112942
    53376 1trn:A (2.2) BS01 ISP 3.4.21.4 GO:0004252 ... P07477 8683601
    53377 1trn:B (2.2) BS01 ISP 3.4.21.4 GO:0004252 ... P07477 8683601
    53378 1tro:A (1.9) BS01 dna ? GO:0003676 ... P0A881 3419502
    53379 1tro:A (1.9) BS02 dna ? GO:0003676 ... P0A881 3419502
    53380 1tro:A (1.9) BS03 TRP ? GO:0003676 ... P0A881 3419502
    53381 1tro:A (1.9) BS04 TRP ? GO:0003676 ... P0A881 3419502
    53382 1tro:C (1.9) BS01 dna ? GO:0003676 ... P0A881 3419502
    53383 1tro:C (1.9) BS02 dna ? GO:0003676 ... P0A881 3419502
    53384 1tro:C (1.9) BS03 TRP ? GO:0003676 ... P0A881 3419502
    53385 1tro:C (1.9) BS04 TRP ? GO:0003676 ... P0A881 3419502
    53386 1tro:E (1.9) BS01 dna ? GO:0003676 ... P0A881 3419502
    53387 1tro:E (1.9) BS02 dna ? GO:0003676 ... P0A881 3419502
    53388 1tro:E (1.9) BS03 TRP ? GO:0003676 ... P0A881 3419502
    53389 1tro:E (1.9) BS04 TRP ? GO:0003676 ... P0A881 3419502
    53390 1tro:G (1.9) BS01 dna ? GO:0003676 ... P0A881 3419502
    53391 1tro:G (1.9) BS02 dna ? GO:0003676 ... P0A881 3419502
    53392 1tro:G (1.9) BS03 TRP ? GO:0003676 ... P0A881 3419502
    53393 1tro:G (1.9) BS04 TRP ? GO:0003676 ... P0A881 3419502
    53394 1trp:A (2.4) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 8125111
    53395 1trp:B (2.4) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 8125111
    53396 1trq:A (2.3) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 8125111
    53397 1trq:B (2.3) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 8125111
    53398 1trr:A (2.4) BS01 dna ? GO:0003676 ... P0A881 8232559
    53399 1trr:A (2.4) BS02 dna ? GO:0003676 ... P0A881 8232559
    53400 1trr:A (2.4) BS03 TRP ? GO:0003676 ... P0A881 8232559

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).