SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    55401 1ump:C (2.13) BS02 C8E 4.2.1.129
    5.4.99.17
    GO:0005811 ... P33247 15113001
    55402 1ump:C (2.13) BS03 SQA 4.2.1.129
    5.4.99.17
    GO:0005811 ... P33247 15113001
    55403 1ums:A (-1.00) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 8580839
    55404 1ums:A (-1.00) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 8580839
    55405 1ums:A (-1.00) BS03 CA 3.4.24.17 GO:0004222 ... P08254 8580839
    55406 1ums:A (-1.00) BS04 0DS 3.4.24.17 GO:0004222 ... P08254 8580839 BindingDB: Ki=127nM
    55407 1umt:A (-1.00) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 8580839
    55408 1umt:A (-1.00) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 8580839
    55409 1umt:A (-1.00) BS03 CA 3.4.24.17 GO:0004222 ... P08254 8580839
    55410 1umt:A (-1.00) BS04 0DS 3.4.24.17 GO:0004222 ... P08254 8580839 BindingDB: Ki=127nM
    55411 1umv:X (1.79) BS01 CA 3.1.1.4 GO:0004623 ... Q8AXY1 15351695
    55412 1umw:A (1.9) BS01 peptide 2.7.11.21 N/A P53350 14532005
    55413 1umw:B (1.9) BS01 peptide 2.7.11.21 N/A P53350 14532005
    55414 1umw:B (1.9) BS02 peptide 2.7.11.21 N/A P53350 14532005
    55415 1umx:L (2.8) BS01 BCL ? GO:0009772 ... P0C0Y8 14741581
    55416 1umx:L (2.8) BS02 BCL ? GO:0009772 ... P0C0Y8 14741581
    55417 1umx:L (2.8) BS03 BPB ? GO:0009772 ... P0C0Y8 14741581
    55418 1umx:L (2.8) BS04 BCL ? GO:0009772 ... P0C0Y8 14741581
    55419 1umx:L (2.8) BS05 FE ? GO:0009772 ... P0C0Y8 14741581
    55420 1umx:L (2.8) BS06 BPB ? GO:0009772 ... P0C0Y8 14741581
    55421 1umx:M (2.8) BS01 BCL ? GO:0009772 ... P0C0Y9 14741581
    55422 1umx:M (2.8) BS02 BPB ? GO:0009772 ... P0C0Y9 14741581
    55423 1umx:M (2.8) BS03 BCL ? GO:0009772 ... P0C0Y9 14741581
    55424 1umx:M (2.8) BS04 BCL ? GO:0009772 ... P0C0Y9 14741581
    55425 1umx:M (2.8) BS05 FE ? GO:0009772 ... P0C0Y9 14741581
    55426 1umx:M (2.8) BS06 BPB ? GO:0009772 ... P0C0Y9 14741581
    55427 1umx:M (2.8) BS07 SPN ? GO:0009772 ... P0C0Y9 14741581
    55428 1umx:M (2.8) BS08 U10 ? GO:0009772 ... P0C0Y9 14741581
    55429 1umy:A (2.5) BS01 ZN 2.1.1.5 GO:0005634 ... O09171 15099744
    55430 1umy:B (2.5) BS01 ZN 2.1.1.5 GO:0005634 ... O09171 15099744
    55431 1umy:C (2.5) BS01 ZN 2.1.1.5 GO:0005634 ... O09171 15099744
    55432 1umy:D (2.5) BS01 ZN 2.1.1.5 GO:0005634 ... O09171 15099744
    55433 1umz:A (1.8) BS01 BGC 2.4.1.207 GO:0004553 ... Q8GZD5 15020748
    55434 1umz:A (1.8) BS02 GAL 2.4.1.207 GO:0004553 ... Q8GZD5 15020748
    55435 1umz:B (1.8) BS01 BGC 2.4.1.207 GO:0004553 ... Q8GZD5 15020748
    55436 1umz:B (1.8) BS02 BGC 2.4.1.207 GO:0004553 ... Q8GZD5 15020748
    55437 1umz:B (1.8) BS03 XYS 2.4.1.207 GO:0004553 ... Q8GZD5 15020748
    55438 1umz:B (1.8) BS04 XYS 2.4.1.207 GO:0004553 ... Q8GZD5 15020748
    55439 1umz:B (1.8) BS05 GAL 2.4.1.207 GO:0004553 ... Q8GZD5 15020748
    55440 1un0:A (2.6) BS01 peptide ? GO:0005737 ... Q02821 14532109
    55441 1un0:B (2.6) BS01 peptide ? GO:0005737 ... Q02821 14532109
    55442 1un6:B (3.1) BS01 rna ? N/A P03001 14603324
    55443 1un6:B (3.1) BS02 ZN ? N/A P03001 14603324
    55444 1un6:B (3.1) BS03 ZN ? N/A P03001 14603324
    55445 1un6:B (3.1) BS04 ZN ? N/A P03001 14603324
    55446 1un6:C (3.1) BS01 rna ? N/A P03001 14603324
    55447 1un6:C (3.1) BS02 rna ? N/A P03001 14603324
    55448 1un6:C (3.1) BS03 ZN ? N/A P03001 14603324
    55449 1un6:C (3.1) BS04 ZN ? N/A P03001 14603324
    55450 1un6:C (3.1) BS05 ZN ? N/A P03001 14603324
    55451 1un6:C (3.1) BS06 MG ? N/A P03001 14603324
    55452 1un6:D (3.1) BS01 rna ? N/A P03001 14603324
    55453 1un6:D (3.1) BS02 ZN ? N/A P03001 14603324
    55454 1un6:D (3.1) BS03 ZN ? N/A P03001 14603324
    55455 1un9:A (3.1) BS01 ANP 2.7.1.29 GO:0004371 ... P45510 12966101
    55456 1un9:A (3.1) BS02 MG 2.7.1.29 GO:0004371 ... P45510 12966101
    55457 1un9:A (3.1) BS03 MG 2.7.1.29 GO:0004371 ... P45510 12966101
    55458 1un9:A (3.1) BS04 2HA 2.7.1.29 GO:0004371 ... P45510 12966101
    55459 1un9:B (3.1) BS01 ANP 2.7.1.29 GO:0004371 ... P45510 12966101
    55460 1un9:B (3.1) BS02 MG 2.7.1.29 GO:0004371 ... P45510 12966101
    55461 1un9:B (3.1) BS03 MG 2.7.1.29 GO:0004371 ... P45510 12966101
    55462 1un9:B (3.1) BS04 2HA 2.7.1.29 GO:0004371 ... P45510 12966101
    55463 1unb:A (1.5) BS01 FE2 1.14.20.1 GO:0005506 ... P18548 14718929
    55464 1unb:A (1.5) BS02 AKG 1.14.20.1 GO:0005506 ... P18548 14718929
    55465 1unb:A (1.5) BS03 PN1 1.14.20.1 GO:0005506 ... P18548 14718929
    55466 1une:A (1.5) BS01 CA 3.1.1.4 GO:0002227 ... P00593 10089393
    55467 1unf:X (1.97) BS01 FE 1.15.1.1 GO:0004784 ... Q9M7R2 15659371
    55468 1ung:A (2.3) BS01 ALH 2.7.11.1 GO:0000226 ... Q00535 15689152 MOAD: ic50=0.18uM
    BindingDB: IC50=200nM
    55469 1ung:B (2.3) BS01 ALH 2.7.11.1 GO:0000226 ... Q00535 15689152 MOAD: ic50=0.18uM
    BindingDB: IC50=200nM
    55470 1unh:A (2.35) BS01 IXM 2.7.11.1 GO:0000226 ... Q00535 15689152 MOAD: ic50=0.1uM
    55471 1unh:B (2.35) BS01 IXM 2.7.11.1 GO:0000226 ... Q00535 15689152 MOAD: ic50=0.1uM
    55472 1unl:A (2.2) BS01 RRC 2.7.11.1 GO:0000226 ... Q00535 15689152 BindingDB: IC50=160nM, Kd=1900nM
    55473 1unq:A (0.98) BS01 4IP 2.7.11.1 N/A P31749 12964941
    55474 1uns:A (2.0) BS01 ZN ? GO:0005576 ... P34071 14559915
    55475 1uns:A (2.0) BS02 ZN ? GO:0005576 ... P34071 14559915
    55476 1uny:B (2.3) BS01 peptide ? GO:0003700 ... P03069 16008357
    55477 1uo4:B (1.7) BS01 PIH ? GO:0003700 ... P03069 16008357
    55478 1uo5:A (2.07) BS01 PIH ? GO:0003700 ... P03069 16008357
    55479 1uo6:A (1.65) BS01 XE 3.4.21.36 GO:0004252 ... P00772 14684889
    55480 1uo9:A (1.5) BS01 FE2 1.14.20.1 GO:0005506 ... P18548 14718929
    55481 1uob:A (1.7) BS01 FE2 1.14.20.1 GO:0005506 ... P18548 14718929
    55482 1uob:A (1.7) BS02 PNN 1.14.20.1 GO:0005506 ... P18548 14718929
    55483 1uob:A (1.7) BS03 AKG 1.14.20.1 GO:0005506 ... P18548 14718929
    55484 1uoc:A (2.3) BS01 CA 3.1.13.4 GO:0003676 ... P39008 14618157
    55485 1uoc:B (2.3) BS01 CA 3.1.13.4 GO:0003676 ... P39008 14618157
    55486 1uod:A (1.9) BS01 G3H 2.7.1.121 GO:0004371 ... P76015 15476397
    55487 1uod:B (1.9) BS01 G3H 2.7.1.121 GO:0004371 ... P76015 15476397
    55488 1uoe:A (2.0) BS01 GOL 2.7.1.121 GO:0004371 ... P76015 15476397
    55489 1uoe:B (2.0) BS01 GOL 2.7.1.121 GO:0004371 ... P76015 15476397
    55490 1uof:A (1.6) BS01 FE2 1.14.20.1 GO:0005506 ... P18548 14718929
    55491 1uof:A (1.6) BS02 PNN 1.14.20.1 GO:0005506 ... P18548 14718929
    55492 1uog:A (1.7) BS01 P1C 1.14.20.1 GO:0005506 ... P18548 14718929
    55493 1uog:A (1.7) BS02 FE2 1.14.20.1 GO:0005506 ... P18548 14718929
    55494 1uol:A (1.9) BS01 ZN ? GO:0000976 ... P04637 14534297
    55495 1uol:B (1.9) BS01 ZN ? GO:0000976 ... P04637 14534297
    55496 1uom:A (2.28) BS01 PTI ? N/A P03372 12825935 MOAD: ic50=19nM
    BindingDB: IC50=19nM, EC50=16.5nM
    55497 1uon:A (7.6) BS01 rna 2.7.7.48 GO:0000166 ... P0CK31 14608373
    55498 1uon:A (7.6) BS02 rna 2.7.7.48 GO:0000166 ... P0CK31 14608373
    55499 1uon:A (7.6) BS03 CH1 2.7.7.48 GO:0000166 ... P0CK31 14608373
    55500 1uon:A (7.6) BS04 CH1 2.7.7.48 GO:0000166 ... P0CK31 14608373
    55501 1uon:A (7.6) BS05 CH1 2.7.7.48 GO:0000166 ... P0CK31 14608373
    55502 1uon:A (7.6) BS06 MN 2.7.7.48 GO:0000166 ... P0CK31 14608373
    55503 1uon:A (7.6) BS07 MN 2.7.7.48 GO:0000166 ... P0CK31 14608373
    55504 1uoo:A (2.35) BS01 peptide 3.4.21.26 GO:0004252 ... P23687 14514675
    55505 1uop:A (1.85) BS01 peptide 3.4.21.26 GO:0004252 ... P23687 14514675
    55506 1uoq:A (2.1) BS01 peptide 3.4.21.26 GO:0004252 ... P23687 14514675
    55507 1uou:A (2.11) BS01 CMU 2.4.2.4 GO:0004645 ... P19971 14725767 MOAD: Ki=20nM
    BindingDB: IC50=35nM, Ki=20nM
    55508 1uov:A (1.65) BS01 CA ? GO:0016020 ... P21707 15340165
    55509 1uov:A (1.65) BS02 CA ? GO:0016020 ... P21707 15340165
    55510 1uov:A (1.65) BS03 CA ? GO:0016020 ... P21707 15340165
    55511 1uow:A (1.04) BS01 CA ? GO:0016020 ... P21707 15340165
    55512 1uow:A (1.04) BS02 CA ? GO:0016020 ... P21707 15340165
    55513 1uoz:A (1.1) BS01 SSG 3.2.1.- GO:0004553 ... Q79G13 15824123
    55514 1uoz:A (1.1) BS02 GLC 3.2.1.- GO:0004553 ... Q79G13 15824123
    55515 1up0:A (1.75) BS01 BGC 3.2.1.- GO:0004553 ... Q79G13 15824123
    55516 1up0:A (1.75) BS02 BGC 3.2.1.- GO:0004553 ... Q79G13 15824123
    55517 1up2:A (1.9) BS01 IFM 3.2.1.- GO:0004553 ... Q79G13 15824123
    55518 1up2:A (1.9) BS02 BGC 3.2.1.- GO:0004553 ... Q79G13 15824123
    55519 1up2:A (1.9) BS03 IFM 3.2.1.- GO:0004553 ... Q79G13 15824123
    55520 1up2:A (1.9) BS04 BGC 3.2.1.- GO:0004553 ... Q79G13 15824123
    55521 1up3:A (1.6) BS01 BGC 3.2.1.- GO:0004553 ... Q79G13 15824123
    55522 1up3:A (1.6) BS02 BGC 3.2.1.- GO:0004553 ... Q79G13 15824123
    55523 1up5:A (1.9) BS01 CA ? GO:0005102 ... P62149 15299715
    55524 1up5:A (1.9) BS02 CA ? GO:0005102 ... P62149 15299715
    55525 1up5:A (1.9) BS03 CA ? GO:0005102 ... P62149 15299715
    55526 1up5:A (1.9) BS04 CA ? GO:0005102 ... P62149 15299715
    55527 1up5:B (1.9) BS01 CA ? GO:0005102 ... P0DP29 15299715
    55528 1up5:B (1.9) BS02 CA ? GO:0005102 ... P0DP29 15299715
    55529 1up5:B (1.9) BS03 CA ? GO:0005102 ... P0DP29 15299715
    55530 1up5:B (1.9) BS04 CA ? GO:0005102 ... P0DP29 15299715
    55531 1up6:A (2.55) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15237973
    55532 1up6:A (2.55) BS02 MN 3.2.1.86 GO:0003824 ... Q9X108 15237973
    55533 1up6:A (2.55) BS03 G6P 3.2.1.86 GO:0003824 ... Q9X108 15237973
    55534 1up6:A (2.55) BS04 MN 3.2.1.86 GO:0003824 ... Q9X108 15237973
    55535 1up6:A (2.55) BS05 MN 3.2.1.86 GO:0003824 ... Q9X108 15237973
    55536 1up6:C (2.55) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15237973
    55537 1up6:C (2.55) BS02 MN 3.2.1.86 GO:0003824 ... Q9X108 15237973
    55538 1up6:C (2.55) BS03 G6P 3.2.1.86 GO:0003824 ... Q9X108 15237973
    55539 1up6:G (2.55) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15237973
    55540 1up6:G (2.55) BS02 MN 3.2.1.86 GO:0003824 ... Q9X108 15237973
    55541 1up7:A (2.4) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55542 1up7:A (2.4) BS02 G6P 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55543 1up7:B (2.4) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55544 1up7:B (2.4) BS02 G6P 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55545 1up7:C (2.4) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55546 1up7:C (2.4) BS02 G6P 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55547 1up7:D (2.4) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55548 1up7:D (2.4) BS02 G6P 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55549 1up7:E (2.4) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55550 1up7:E (2.4) BS02 G6P 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55551 1up7:F (2.4) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55552 1up7:F (2.4) BS02 G6P 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55553 1up7:G (2.4) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55554 1up7:G (2.4) BS02 G6P 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55555 1up7:H (2.4) BS01 NAD 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55556 1up7:H (2.4) BS02 G6P 3.2.1.86 GO:0003824 ... Q9X108 15670594
    55557 1up8:A (2.2) BS01 CA 1.11.1.18 GO:0004601 ... O81959 15776268
    55558 1up8:B (2.2) BS01 CA 1.11.1.18 GO:0004601 ... O81959 15776268
    55559 1up8:C (2.2) BS01 CA 1.11.1.18 GO:0004601 ... O81959 15776268
    55560 1up8:D (2.2) BS01 CA 1.11.1.18 GO:0004601 ... O81959 15776268
    55561 1up9:A (1.35) BS01 HEC ? GO:0009055 ... Q9L915 14705030
    55562 1up9:A (1.35) BS02 HEC ? GO:0009055 ... Q9L915 14705030
    55563 1up9:A (1.35) BS03 HEC ? GO:0009055 ... Q9L915 14705030
    55564 1up9:A (1.35) BS04 HEC ? GO:0009055 ... Q9L915 14705030
    55565 1up9:A (1.35) BS05 SO4 ? GO:0009055 ... Q9L915 14705030
    55566 1upa:A (2.35) BS01 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55567 1upa:A (2.35) BS02 MG 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55568 1upa:A (2.35) BS03 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55569 1upa:A (2.35) BS04 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55570 1upa:A (2.35) BS05 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55571 1upa:B (2.35) BS01 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55572 1upa:B (2.35) BS02 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55573 1upa:B (2.35) BS03 MG 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55574 1upa:B (2.35) BS04 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55575 1upa:B (2.35) BS05 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55576 1upa:C (2.35) BS01 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55577 1upa:C (2.35) BS02 MG 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55578 1upa:C (2.35) BS03 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55579 1upa:C (2.35) BS04 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55580 1upa:C (2.35) BS05 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55581 1upa:D (2.35) BS01 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55582 1upa:D (2.35) BS02 MG 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55583 1upa:D (2.35) BS03 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55584 1upa:D (2.35) BS04 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55585 1upb:A (2.35) BS01 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55586 1upb:A (2.35) BS02 MG 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55587 1upb:A (2.35) BS03 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55588 1upb:A (2.35) BS04 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55589 1upb:A (2.35) BS05 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55590 1upb:B (2.35) BS01 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55591 1upb:B (2.35) BS02 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55592 1upb:B (2.35) BS03 MG 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55593 1upb:B (2.35) BS04 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55594 1upb:B (2.35) BS05 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55595 1upb:C (2.35) BS01 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55596 1upb:C (2.35) BS02 MG 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55597 1upb:C (2.35) BS03 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55598 1upb:C (2.35) BS04 SO4 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55599 1upb:C (2.35) BS05 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876
    55600 1upb:D (2.35) BS01 TPP 2.5.1.66 GO:0000287 ... Q9LCV9 14623876

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).