SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    603201 7am8:A (2.04) BS01 HIS 3.4.21.62 GO:0004252 ... P00782 33717424
    603202 7am9:A (0.99) BS01 OMP 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    603203 7am9:A (0.99) BS02 U 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    603204 7ama:A (2.48) BS01 RMK ? GO:0005125 ... Q16552 35767390
    603205 7ama:B (2.48) BS01 RMK ? GO:0005125 ... Q16552 35767390
    603206 7amc:A (1.22) BS01 73B ? N/A A0A5K4ESD7 N/A
    603207 7amc:B (1.22) BS01 73B ? N/A A0A5K4ESD7 N/A
    603208 7amd:A (2.25) BS01 RMW 2.3.1.6 GO:0016746 ... P28329 33079431 MOAD: Kd=0.000000064M
    603209 7amg:A (3.18) BS01 RMQ ? GO:0005125 ... Q16552 35767390
    603210 7amg:B (3.18) BS01 RMQ ? GO:0005125 ... Q16552 35767390
    603211 7amg:C (3.18) BS01 RMQ ? GO:0005125 ... Q16552 35767390
    603212 7amg:D (3.18) BS01 RMQ ? GO:0005125 ... Q16552 35767390
    603213 7amh:A (1.863) BS01 RN5 ? N/A A0A5K4ESD7 N/A
    603214 7amh:B (1.863) BS01 RN5 ? N/A A0A5K4ESD7 N/A
    603215 7amj:A (1.59) BS01 RMZ 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 33811162
    603216 7amk:A (2.2) BS01 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603217 7amk:A (2.2) BS02 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603218 7amk:A (2.2) BS03 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603219 7amk:B (2.2) BS01 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603220 7amk:B (2.2) BS02 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603221 7amk:B (2.2) BS03 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603222 7aml:A (3.5) BS01 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603223 7aml:A (3.5) BS02 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603224 7aml:A (3.5) BS03 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603225 7aml:A (3.5) BS04 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603226 7aml:D (3.5) BS01 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603227 7aml:D (3.5) BS02 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603228 7aml:D (3.5) BS03 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603229 7aml:D (3.5) BS04 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    603230 7amn:A (2.3) BS01 dna ? GO:0000976 ... B4X9Q4 33693882
    603231 7amn:A (2.3) BS02 dna ? GO:0000976 ... B4X9Q4 33693882
    603232 7amn:B (2.3) BS01 dna ? GO:0000976 ... B4X9Q4 33693882
    603233 7amn:B (2.3) BS02 dna ? GO:0000976 ... B4X9Q4 33693882
    603234 7amp:L (2.64) BS01 ZN N/A N/A N/A N/A
    603235 7amq:L (2.353) BS01 ZN N/A N/A N/A N/A
    603236 7amr:L (1.949) BS01 ZN N/A N/A N/A N/A
    603237 7ams:L (2.419) BS01 ZN N/A N/A N/A N/A
    603238 7amt:A (2.6) BS01 dna ? GO:0000976 ... B4X9Q4 33693882
    603239 7amt:A (2.6) BS02 dna ? GO:0000976 ... B4X9Q4 33693882
    603240 7amt:B (2.6) BS01 dna ? GO:0000976 ... B4X9Q4 33693882
    603241 7amt:B (2.6) BS02 dna ? GO:0000976 ... B4X9Q4 33693882
    603242 7amv:A (2.8) BS01 dna 2.7.7.6 GO:0000428 ... Q1PIV1 34556871
    603243 7amv:A (2.8) BS02 MG 2.7.7.6 GO:0000428 ... Q1PIV1 34556871
    603244 7amv:A (2.8) BS03 ZN 2.7.7.6 GO:0000428 ... Q1PIV1 34556871
    603245 7amv:A (2.8) BS04 ZN 2.7.7.6 GO:0000428 ... Q1PIV1 34556871
    603246 7amv:B (2.8) BS01 dna 2.7.7.6 GO:0000428 ... Q49PH2 34556871
    603247 7amv:B (2.8) BS02 ZN 2.7.7.6 GO:0000428 ... Q49PH2 34556871
    603248 7amv:J (2.8) BS01 ZN 2.7.7.6 GO:0000428 ... Q49QI2 34556871
    603249 7amv:K (2.8) BS01 dna ? GO:0045893 ... Q49QC6 34556871
    603250 7amv:K (2.8) BS02 dna ? GO:0045893 ... Q49QC6 34556871
    603251 7amv:W (2.8) BS01 dna ? GO:0003677 ... Q49QE8 34556871
    603252 7amv:W (2.8) BS02 dna ? GO:0003677 ... Q49QE8 34556871
    603253 7amx:AAA (2.85) BS01 ZN N/A N/A N/A 34726168
    603254 7amx:AAA (2.85) BS02 ZN N/A N/A N/A 34726168
    603255 7amz:A (2.25) BS01 FUC 3.1.1.8 GO:0001540 ... P06276 33838585
    603256 7amz:A (2.25) BS02 SIA 3.1.1.8 GO:0001540 ... P06276 33838585
    603257 7amz:A (2.25) BS03 RNZ 3.1.1.8 GO:0001540 ... P06276 33838585
    603258 7an1:AAA (1.5) BS01 GAL ? GO:0016787 ... Q8A789 34616040
    603259 7an1:AAA (1.5) BS02 CA ? GO:0016787 ... Q8A789 34616040
    603260 7an4:A (2.6) BS01 GDP 5.1.3.13 GO:0000271 ... Q0P8I4 N/A
    603261 7an4:A (2.6) BS02 GDP 5.1.3.13 GO:0000271 ... Q0P8I4 N/A
    603262 7an4:B (2.6) BS01 GDP 5.1.3.13 GO:0000271 ... Q0P8I4 N/A
    603263 7an4:B (2.6) BS02 GDP 5.1.3.13 GO:0000271 ... Q0P8I4 N/A
    603264 7an4:D (2.6) BS01 GDP 5.1.3.13 GO:0000271 ... Q0P8I4 N/A
    603265 7an4:D (2.6) BS02 GDP 5.1.3.13 GO:0000271 ... Q0P8I4 N/A
    603266 7an5:A (1.91) BS01 RDH 4.2.1.151 GO:0009234 ... Q9L0T8 N/A
    603267 7an5:B (1.91) BS01 RDH 4.2.1.151 GO:0009234 ... Q9L0T8 N/A
    603268 7an6:A (1.91) BS01 ISJ 4.2.1.151 GO:0009234 ... Q9L0T8 N/A
    603269 7an6:B (1.91) BS01 ISJ 4.2.1.151 GO:0009234 ... Q9L0T8 N/A
    603270 7an7:A (1.81) BS01 RDH 4.2.1.151 GO:0009234 ... Q9L0T8 N/A
    603271 7an7:B (1.81) BS01 RDH 4.2.1.151 GO:0009234 ... Q9L0T8 N/A
    603272 7an8:A (2.01) BS01 RDH 4.2.1.151 GO:0009234 ... Q9L0T8 N/A
    603273 7an8:B (2.01) BS01 RDH 4.2.1.151 GO:0009234 ... Q9L0T8 N/A
    603274 7an9:A (2.11) BS01 RDH 4.2.1.151 GO:0009234 ... Q9L0T8 N/A
    603275 7an9:B (2.11) BS01 RDH 4.2.1.151 GO:0009234 ... Q9L0T8 N/A
    603276 7ana:AAA (2.3) BS01 CA ? GO:0016787 ... Q8A7A3 34616040
    603277 7ana:BBB (2.3) BS01 CA ? GO:0016787 ... Q8A7A3 34616040
    603278 7anb:AAA (2.6) BS01 SO4 ? GO:0016787 ... Q8A7A3 34616040
    603279 7anb:AAA (2.6) BS02 CA ? GO:0016787 ... Q8A7A3 34616040
    603280 7anb:BBB (2.6) BS01 SO4 ? GO:0016787 ... Q8A7A3 34616040
    603281 7anb:BBB (2.6) BS02 CA ? GO:0016787 ... Q8A7A3 34616040
    603282 7anc:A (1.66) BS01 NAP 1.1.1.271 GO:0000166 ... Q0P8I6 N/A
    603283 7anc:B (1.66) BS01 NAP 1.1.1.271 GO:0000166 ... Q0P8I6 N/A
    603284 7ane:A (3.9) BS01 rna ? GO:0003735 ... E9ADK5 33168716
    603285 7ane:Aa (3.9) BS01 rna ? N/A Q4Q183 33168716
    603286 7ane:Ab (3.9) BS01 rna ? GO:0003735 ... Q4Q6A7 33168716
    603287 7ane:Ad (3.9) BS01 rna ? N/A Q4QIB3 33168716
    603288 7ane:Ae (3.9) BS01 rna ? N/A E9ACG2 33168716
    603289 7ane:Af (3.9) BS01 rna ? N/A Q4QJB6 33168716
    603290 7ane:Ag (3.9) BS01 rna ? N/A Q4Q829 33168716
    603291 7ane:Ag (3.9) BS02 NAD ? N/A Q4Q829 33168716
    603292 7ane:Ah (3.9) BS01 rna ? N/A Q4QC45 33168716
    603293 7ane:Aj (3.9) BS01 rna ? N/A Q4Q728 33168716
    603294 7ane:Al (3.9) BS01 rna ? N/A Q4Q1C8 33168716
    603295 7ane:Am (3.9) BS01 rna ? GO:0003723 ... Q4QC22 33168716
    603296 7ane:An (3.9) BS01 rna ? N/A Q4Q0F5 33168716
    603297 7ane:Ao (3.9) BS01 rna ? N/A Q4Q547 33168716
    603298 7ane:Aq (3.9) BS01 rna ? N/A Q4QD92 33168716
    603299 7ane:Ar (3.9) BS01 rna ? N/A Q4Q712 33168716
    603300 7ane:At (3.9) BS01 rna ? GO:0005737 ... Q4Q4L5 33168716
    603301 7ane:Au (3.9) BS01 rna ? N/A Q4Q8J6 33168716
    603302 7ane:Av (3.9) BS01 rna ? N/A Q4QIT7 33168716
    603303 7ane:Aw (3.9) BS01 rna ? N/A E9AD00 33168716
    603304 7ane:Ax (3.9) BS01 rna ? GO:0046872 ... Q4Q7T1 33168716
    603305 7ane:Ax (3.9) BS02 ZN ? GO:0046872 ... Q4Q7T1 33168716
    603306 7ane:Ax (3.9) BS03 ZN ? GO:0046872 ... Q4Q7T1 33168716
    603307 7ane:Ay (3.9) BS01 rna ? N/A E9ADN7 33168716
    603308 7ane:Ay (3.9) BS02 rna ? N/A E9ADN7 33168716
    603309 7ane:Az (3.9) BS01 rna ? N/A Q4Q4D9 33168716
    603310 7ane:B (3.9) BS01 rna ? GO:0003735 ... Q4QGU6 33168716
    603311 7ane:BB (3.9) BS01 rna ? N/A Q4Q4D6 33168716
    603312 7ane:BD (3.9) BS01 ZN ? GO:0005737 ... Q4QE11 33168716
    603313 7ane:BE (3.9) BS01 rna ? GO:0005739 ... Q4QE16 33168716
    603314 7ane:BF (3.9) BS01 rna ? N/A Q4QIQ1 33168716
    603315 7ane:BG (3.9) BS01 rna N/A N/A N/A 33168716
    603316 7ane:BH (3.9) BS01 rna 5.2.1.8 GO:0000413 ... Q4QBK2 33168716
    603317 7ane:BL (3.9) BS01 rna ? GO:0003723 ... Q4QIE1 33168716
    603318 7ane:BO (3.9) BS01 rna ? GO:0003735 ... Q4Q2G1 33168716
    603319 7ane:BP (3.9) BS01 rna N/A N/A N/A 33168716
    603320 7ane:Bj (3.9) BS01 rna ? N/A Q4Q0E1 33168716
    603321 7ane:C (3.9) BS01 rna ? GO:0005737 ... Q4QIE5 33168716
    603322 7ane:D (3.9) BS01 rna ? N/A Q4QI77 33168716
    603323 7ane:E (3.9) BS01 rna ? GO:0003735 ... E9ACT9 33168716
    603324 7ane:F (3.9) BS01 rna ? GO:0003729 ... Q4Q2H6 33168716
    603325 7ane:G (3.9) BS01 rna ? GO:0003735 ... Q4QF19 33168716
    603326 7ane:G (3.9) BS02 NAD ? GO:0003735 ... Q4QF19 33168716
    603327 7ane:H (3.9) BS01 rna ? GO:0003735 ... Q4QFP0 33168716
    603328 7ane:I (3.9) BS01 rna ? GO:0003735 ... Q4QF04 33168716
    603329 7ane:J (3.9) BS01 rna ? GO:0005737 ... Q4QCY7 33168716
    603330 7ane:K (3.9) BS01 rna ? GO:0003735 ... Q4Q192 33168716
    603331 7ane:L (3.9) BS01 rna ? GO:0003723 ... Q4QFQ5 33168716
    603332 7ane:M (3.9) BS01 rna ? GO:0003735 ... Q4QBR0 33168716
    603333 7ane:N (3.9) BS01 rna ? GO:0003735 ... Q4QA05 33168716
    603334 7ane:O (3.9) BS01 rna ? GO:0003723 ... Q4Q9S7 33168716
    603335 7ane:P (3.9) BS01 rna ? GO:0005737 ... Q4QG34 33168716
    603336 7ane:Q (3.9) BS01 rna ? GO:0003735 ... Q4Q719 33168716
    603337 7ane:R (3.9) BS01 rna ? GO:0003735 ... Q9XZY7 33168716
    603338 7ane:S (3.9) BS01 rna ? GO:0016020 ... Q9U0Z7 33168716
    603339 7ane:T (3.9) BS01 rna ? GO:0005634 ... Q4Q2W9 33168716
    603340 7ane:T (3.9) BS02 ZN ? GO:0005634 ... Q4Q2W9 33168716
    603341 7ane:U (3.9) BS01 rna ? GO:0005840 ... Q4Q2Q8 33168716
    603342 7ane:UA (3.9) BS01 rna N/A N/A N/A 33168716
    603343 7ane:UB (3.9) BS01 rna N/A N/A N/A 33168716
    603344 7ane:V (3.9) BS01 rna ? N/A Q4QCK6 33168716
    603345 7ane:W (3.9) BS01 rna ? N/A Q4Q6A3 33168716
    603346 7ane:W (3.9) BS02 ZN ? N/A Q4Q6A3 33168716
    603347 7ane:X (3.9) BS01 rna ? N/A Q4Q5A3 33168716
    603348 7ane:Z (3.9) BS01 rna ? N/A Q4Q152 33168716
    603349 7ane:a (3.9) BS01 rna ? GO:0003723 ... Q4Q1N8 33168716
    603350 7ane:aa (3.9) BS01 rna ? N/A Q4QEP4 33168716
    603351 7ane:ad (3.9) BS01 rna ? GO:0003729 ... Q4QAQ0 33168716
    603352 7ane:ae (3.9) BS01 rna ? N/A Q4QFA7 33168716
    603353 7ane:ag (3.9) BS01 rna ? N/A E9ADP4 33168716
    603354 7ane:aj (3.9) BS01 rna ? GO:0005737 ... Q4Q7Q8 33168716
    603355 7ane:am (3.9) BS01 rna N/A N/A N/A 33168716
    603356 7ane:aq (3.9) BS01 rna ? N/A Q4QF40 33168716
    603357 7ane:ar (3.9) BS01 rna ? GO:0005737 ... Q4Q5L8 33168716
    603358 7ane:at (3.9) BS01 rna ? N/A Q4QE10 33168716
    603359 7ane:au (3.9) BS01 rna ? GO:0004792 ... Q4Q6T5 33168716
    603360 7ane:aw (3.9) BS01 rna ? N/A Q4QHA2 33168716
    603361 7ane:ax (3.9) BS01 rna ? N/A Q4Q103 33168716
    603362 7ane:ay (3.9) BS01 rna ? N/A Q4Q7W4 33168716
    603363 7ane:az (3.9) BS01 rna ? GO:0005739 ... Q4QBM5 33168716
    603364 7ane:c (3.9) BS01 rna ? GO:0003735 ... Q4QDW2 33168716
    603365 7ane:d (3.9) BS01 rna ? GO:0003735 ... Q4QB37 33168716
    603366 7ane:e (3.9) BS01 rna ? GO:0005737 ... Q4Q4M2 33168716
    603367 7ane:f (3.9) BS01 rna ? GO:0003735 ... Q4QJG8 33168716
    603368 7ane:g (3.9) BS01 rna ? N/A E9AE13 33168716
    603369 7ane:h (3.9) BS01 rna ? N/A Q4QIP8 33168716
    603370 7ane:i (3.9) BS01 rna ? GO:0003735 ... Q4QCY9 33168716
    603371 7ane:j (3.9) BS01 rna ? GO:0005737 ... Q4Q8H5 33168716
    603372 7ane:k (3.9) BS01 rna ? GO:0003735 ... E9AFK9 33168716
    603373 7ane:m (3.9) BS01 rna ? GO:0003723 ... Q4Q1J0 33168716
    603374 7ane:n (3.9) BS01 rna ? N/A Q4Q7N2 33168716
    603375 7ane:o (3.9) BS01 peptide ? GO:0005739 ... E9AFL9 33168716
    603376 7ane:q (3.9) BS01 rna ? N/A E9AFH3 33168716
    603377 7ane:s (3.9) BS01 rna ? N/A E9ACZ5 33168716
    603378 7ane:t (3.9) BS01 rna ? N/A Q4Q8W5 33168716
    603379 7ane:v (3.9) BS01 rna ? GO:0005737 ... Q4QCC8 33168716
    603380 7ane:w (3.9) BS01 rna ? GO:0005739 ... Q4Q4E6 33168716
    603381 7anj:A (2.35) BS01 GDD 5.1.3.13 GO:0000271 ... Q6EF58 N/A
    603382 7anj:A (2.35) BS02 GDP 5.1.3.13 GO:0000271 ... Q6EF58 N/A
    603383 7anj:B (2.35) BS01 GDD 5.1.3.13 GO:0000271 ... Q6EF58 N/A
    603384 7anj:B (2.35) BS02 GDP 5.1.3.13 GO:0000271 ... Q6EF58 N/A
    603385 7anm:A (2.72) BS01 peptide ? N/A Q4TVS9 34031522
    603386 7anm:B (2.72) BS01 peptide ? N/A Q4TVS9 34031522
    603387 7anm:B (2.72) BS02 peptide ? N/A Q4TVS9 34031522
    603388 7anm:C (2.72) BS01 peptide ? N/A Q4TVS9 34031522
    603389 7ans:A (1.7) BS01 RNW 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 33811162
    603390 7ant:A (1.52) BS01 HEC ? GO:0004497 ... Q11ZY2 N/A
    603391 7ant:B (1.52) BS01 HEC ? GO:0004497 ... Q11ZY2 N/A
    603392 7anv:A (1.65) BS01 HEM N/A GO:0004601 ... N/A 33369202
    603393 7anv:A (1.65) BS02 OXY N/A GO:0004601 ... N/A 33369202
    603394 7anw:A (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1 33185189
    603395 7anw:B (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1 33185189
    603396 7anw:C (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1 33185189
    603397 7anw:D (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1 33185189
    603398 7anw:E (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1 33185189
    603399 7anw:F (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1 33185189
    603400 7anw:G (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1 33185189

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).