SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    60601 1w8f:C (1.05) BS03 CA ? GO:0030246 ... Q9HYN5 15790314
    60602 1w8f:D (1.05) BS01 FUC ? GO:0030246 ... Q9HYN5 15790314
    60603 1w8f:D (1.05) BS02 CA ? GO:0030246 ... Q9HYN5 15790314
    60604 1w8f:D (1.05) BS03 CA ? GO:0030246 ... Q9HYN5 15790314
    60605 1w8g:A (2.0) BS01 PLP ? GO:0005737 ... P67080 N/A
    60606 1w8h:A (1.75) BS01 FUC ? GO:0030246 ... Q9HYN5 15790314
    60607 1w8h:A (1.75) BS02 CA ? GO:0030246 ... Q9HYN5 15790314
    60608 1w8h:A (1.75) BS03 CA ? GO:0030246 ... Q9HYN5 15790314
    60609 1w8h:B (1.75) BS01 FUC ? GO:0030246 ... Q9HYN5 15790314
    60610 1w8h:B (1.75) BS02 CA ? GO:0030246 ... Q9HYN5 15790314
    60611 1w8h:B (1.75) BS03 CA ? GO:0030246 ... Q9HYN5 15790314
    60612 1w8h:C (1.75) BS01 FUC ? GO:0030246 ... Q9HYN5 15790314
    60613 1w8h:C (1.75) BS02 CA ? GO:0030246 ... Q9HYN5 15790314
    60614 1w8h:C (1.75) BS03 CA ? GO:0030246 ... Q9HYN5 15790314
    60615 1w8h:D (1.75) BS01 FUC ? GO:0030246 ... Q9HYN5 15790314
    60616 1w8h:D (1.75) BS02 CA ? GO:0030246 ... Q9HYN5 15790314
    60617 1w8h:D (1.75) BS03 CA ? GO:0030246 ... Q9HYN5 15790314
    60618 1w8l:A (1.8) BS01 1P3 5.2.1.8 GO:0000413 ... P62937 14993672 MOAD: Ki=320mM
    60619 1w8m:A (1.65) BS01 E1P 5.2.1.8 GO:0000413 ... P62937 14993672 MOAD: Ki=25mM
    60620 1w8n:A (2.1) BS01 GAL 3.2.1.18 GO:0004308 ... Q02834 15527797
    60621 1w8n:A (2.1) BS02 DAN 3.2.1.18 GO:0004308 ... Q02834 15527797
    60622 1w8o:A (1.7) BS01 GAL 3.2.1.18 GO:0004308 ... Q02834 15527797
    60623 1w8q:A (2.85) BS01 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60624 1w8q:A (2.85) BS02 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60625 1w8q:A (2.85) BS03 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60626 1w8q:A (2.85) BS04 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60627 1w8q:B (2.85) BS01 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60628 1w8q:B (2.85) BS02 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60629 1w8q:B (2.85) BS03 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60630 1w8q:B (2.85) BS04 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60631 1w8q:C (2.85) BS01 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60632 1w8q:C (2.85) BS02 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60633 1w8q:C (2.85) BS03 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60634 1w8q:C (2.85) BS04 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60635 1w8q:D (2.85) BS01 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60636 1w8q:D (2.85) BS02 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60637 1w8q:D (2.85) BS03 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60638 1w8q:D (2.85) BS04 CO 3.4.16.4 GO:0000270 ... P39045 15987687
    60639 1w8s:A (1.85) BS01 FBP 4.1.2.13 GO:0004332 ... P58315 15766250
    60640 1w8s:B (1.85) BS01 FBP 4.1.2.13 GO:0004332 ... P58315 15766250
    60641 1w8s:C (1.85) BS01 FBP 4.1.2.13 GO:0004332 ... P58315 15766250
    60642 1w8s:D (1.85) BS01 FBP 4.1.2.13 GO:0004332 ... P58315 15766250
    60643 1w8s:E (1.85) BS01 FBP 4.1.2.13 GO:0004332 ... P58315 15766250
    60644 1w8s:F (1.85) BS01 FBP 4.1.2.13 GO:0004332 ... P58315 15766250
    60645 1w8s:G (1.85) BS01 FBP 4.1.2.13 GO:0004332 ... P58315 15766250
    60646 1w8s:H (1.85) BS01 FBP 4.1.2.13 GO:0004332 ... P58315 15766250
    60647 1w8s:I (1.85) BS01 FBP 4.1.2.13 GO:0004332 ... P58315 15766250
    60648 1w8s:J (1.85) BS01 FBP 4.1.2.13 GO:0004332 ... P58315 15766250
    60649 1w8t:A (1.4) BS01 BGC ? N/A Q9C171 15784618
    60650 1w8t:A (1.4) BS02 BGC ? N/A Q9C171 15784618
    60651 1w8u:A (1.3) BS01 BMA ? N/A Q9C171 15784618
    60652 1w8u:A (1.3) BS02 BMA ? N/A Q9C171 15784618
    60653 1w8u:A (1.3) BS03 BMA ? N/A Q9C171 15784618
    60654 1w8u:A (1.3) BS04 BMA ? N/A Q9C171 15784618
    60655 1w8y:A (2.4) BS01 MG 3.4.16.4 GO:0000270 ... P39045 15987687
    60656 1w8y:A (2.4) BS02 NCF 3.4.16.4 GO:0000270 ... P39045 15987687
    60657 1w8y:B (2.4) BS01 NCF 3.4.16.4 GO:0000270 ... P39045 15987687
    60658 1w8y:C (2.4) BS01 NCF 3.4.16.4 GO:0000270 ... P39045 15987687
    60659 1w8y:D (2.4) BS01 MG 3.4.16.4 GO:0000270 ... P39045 15987687
    60660 1w8y:D (2.4) BS02 NCF 3.4.16.4 GO:0000270 ... P39045 15987687
    60661 1w92:A (1.7) BS01 HEM 1.7.-.- GO:0001666 ... Q9ER97 15548613
    60662 1w96:A (1.8) BS01 S1A 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15610732 MOAD: Kd=3.9nM
    60663 1w96:B (1.8) BS01 S1A 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15610732 MOAD: Kd=3.9nM
    60664 1w96:C (1.8) BS01 S1A 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15610732 MOAD: Kd=3.9nM
    60665 1w9b:M (1.7) BS01 CGT 3.2.1.147 GO:0004553 ... P29736 15889170 MOAD: ic50=0.99mM
    60666 1w9b:M (1.7) BS02 ZN 3.2.1.147 GO:0004553 ... P29736 15889170
    60667 1w9b:M (1.7) BS03 SO4 3.2.1.147 GO:0004553 ... P29736 15889170
    60668 1w9b:M (1.7) BS04 SO4 3.2.1.147 GO:0004553 ... P29736 15889170
    60669 1w9d:M (1.6) BS01 SEH 3.2.1.147 GO:0004553 ... P29736 15889170 MOAD: ic50=0.58mM
    60670 1w9d:M (1.6) BS02 ZN 3.2.1.147 GO:0004553 ... P29736 15889170
    60671 1w9d:M (1.6) BS03 SO4 3.2.1.147 GO:0004553 ... P29736 15889170
    60672 1w9d:M (1.6) BS04 SO4 3.2.1.147 GO:0004553 ... P29736 15889170
    60673 1w9e:A (1.56) BS01 peptide ? N/A O00560 16533050
    60674 1w9e:A (1.56) BS02 peptide ? N/A O00560 16533050
    60675 1w9e:B (1.56) BS01 peptide ? N/A O00560 16533050
    60676 1w9i:A (1.75) BS01 MG 3.6.4.1 GO:0003774 ... P08799 N/A
    60677 1w9i:A (1.75) BS02 ADP 3.6.4.1 GO:0003774 ... P08799 N/A
    60678 1w9i:A (1.75) BS03 BEF 3.6.4.1 GO:0003774 ... P08799 N/A
    60679 1w9j:A (2.0) BS01 MG 3.6.4.1 GO:0003774 ... P08799 N/A
    60680 1w9j:A (2.0) BS02 ADP 3.6.4.1 GO:0003774 ... P08799 N/A
    60681 1w9j:A (2.0) BS03 ALF 3.6.4.1 GO:0003774 ... P08799 N/A
    60682 1w9k:A (2.05) BS01 MG 3.6.4.1 GO:0003774 ... P08799 N/A
    60683 1w9k:A (2.05) BS02 ADP 3.6.4.1 GO:0003774 ... P08799 N/A
    60684 1w9k:A (2.05) BS03 BEF 3.6.4.1 GO:0003774 ... P08799 N/A
    60685 1w9l:A (1.95) BS01 MG 3.6.4.1 GO:0003774 ... P08799 N/A
    60686 1w9l:A (1.95) BS02 ADP 3.6.4.1 GO:0003774 ... P08799 N/A
    60687 1w9l:A (1.95) BS03 ALF 3.6.4.1 GO:0003774 ... P08799 N/A
    60688 1w9m:A (1.35) BS01 SF4 1.7.99.1 GO:0003824 ... P31101 18560155
    60689 1w9m:A (1.35) BS02 FS2 1.7.99.1 GO:0003824 ... P31101 18560155
    60690 1w9o:A (2.25) BS01 peptide ? N/A O00560 16533050
    60691 1w9o:B (2.25) BS01 peptide ? N/A O00560 16533050
    60692 1w9q:B (1.7) BS01 peptide ? N/A O00560 16533050
    60693 1w9t:A (1.62) BS01 XYP 3.2.1.39 GO:0030246 ... Q9KG76 15501830
    60694 1w9t:A (1.62) BS02 XYS 3.2.1.39 GO:0030246 ... Q9KG76 15501830
    60695 1w9t:A (1.62) BS03 XYP 3.2.1.39 GO:0030246 ... Q9KG76 15501830
    60696 1w9t:B (1.62) BS01 XYP 3.2.1.39 GO:0030246 ... Q9KG76 15501830
    60697 1w9t:B (1.62) BS02 XYS 3.2.1.39 GO:0030246 ... Q9KG76 15501830
    60698 1w9t:B (1.62) BS03 XYP 3.2.1.39 GO:0030246 ... Q9KG76 15501830
    60699 1w9u:A (1.85) BS01 peptide 3.2.1.14 GO:0004553 ... Q873X9 15664516
    60700 1w9u:B (1.85) BS01 peptide 3.2.1.14 GO:0004553 ... Q873X9 15664516
    60701 1w9v:A (2.0) BS01 peptide 3.2.1.14 GO:0004553 ... E9QRF2 15664516
    60702 1w9v:B (2.0) BS01 peptide 3.2.1.14 GO:0004553 ... E9QRF2 15664516
    60703 1w9w:A (2.1) BS01 BGC 3.2.1.39 GO:0030246 ... Q9KG76 15501830
    60704 1w9w:A (2.1) BS02 GLC 3.2.1.39 GO:0030246 ... Q9KG76 15501830
    60705 1w9w:A (2.1) BS03 BGC 3.2.1.39 GO:0030246 ... Q9KG76 15501830
    60706 1w9x:A (2.1) BS01 GLC 3.2.1.1 GO:0004553 ... A0ACD6B935 15681870
    60707 1w9x:A (2.1) BS02 AC1 3.2.1.1 GO:0004553 ... A0ACD6B935 15681870
    60708 1w9x:A (2.1) BS03 GLC 3.2.1.1 GO:0004553 ... A0ACD6B935 15681870
    60709 1w9x:A (2.1) BS04 GLC 3.2.1.1 GO:0004553 ... A0ACD6B935 15681870
    60710 1w9x:A (2.1) BS05 GLC 3.2.1.1 GO:0004553 ... A0ACD6B935 15681870
    60711 1w9x:A (2.1) BS06 AC1 3.2.1.1 GO:0004553 ... A0ACD6B935 15681870
    60712 1w9x:A (2.1) BS07 CA 3.2.1.1 GO:0004553 ... A0ACD6B935 15681870
    60713 1w9x:A (2.1) BS08 CA 3.2.1.1 GO:0004553 ... A0ACD6B935 15681870
    60714 1w9x:A (2.1) BS09 CA 3.2.1.1 GO:0004553 ... A0ACD6B935 15681870
    60715 1wa0:X (1.6) BS01 CU 1.7.2.1 GO:0005507 ... O68601 15610025
    60716 1wa0:X (1.6) BS02 CU 1.7.2.1 GO:0005507 ... O68601 15610025
    60717 1wa0:X (1.6) BS03 ZN 1.7.2.1 GO:0005507 ... O68601 15610025
    60718 1wa1:X (1.65) BS01 CU 1.7.2.1 GO:0005507 ... O68601 15610025
    60719 1wa1:X (1.65) BS02 CU 1.7.2.1 GO:0005507 ... O68601 15610025
    60720 1wa1:X (1.65) BS03 ZN 1.7.2.1 GO:0005507 ... O68601 15610025
    60721 1wa2:X (1.72) BS01 CU 1.7.2.1 GO:0005507 ... O68601 15610025
    60722 1wa2:X (1.72) BS02 CU 1.7.2.1 GO:0005507 ... O68601 15610025
    60723 1wa2:X (1.72) BS03 ZN 1.7.2.1 GO:0005507 ... O68601 15610025
    60724 1wa2:X (1.72) BS04 ZN 1.7.2.1 GO:0005507 ... O68601 15610025
    60725 1wa2:X (1.72) BS05 NO2 1.7.2.1 GO:0005507 ... O68601 15610025
    60726 1wa3:A (1.9) BS01 PYR 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60727 1wa3:A (1.9) BS02 SO4 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60728 1wa3:B (1.9) BS01 PYR 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60729 1wa3:B (1.9) BS02 SO4 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60730 1wa3:C (1.9) BS01 PYR 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60731 1wa3:C (1.9) BS02 SO4 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60732 1wa3:D (1.9) BS01 PYR 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60733 1wa3:D (1.9) BS02 SO4 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60734 1wa3:E (1.9) BS01 PYR 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60735 1wa3:E (1.9) BS02 SO4 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60736 1wa3:F (1.9) BS01 PYR 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60737 1wa3:F (1.9) BS02 SO4 4.1.2.14 GO:0008674 ... Q9WXS1 16403639
    60738 1wa5:A (2.0) BS01 GTP 3.6.5.- GO:0003924 ... P62825 N/A
    60739 1wa5:A (2.0) BS02 MG 3.6.5.- GO:0003924 ... P62825 N/A
    60740 1wa6:X (2.55) BS01 FE2 1.14.17.4 GO:0002238 ... Q08506 15489165
    60741 1wa7:A (-1.00) BS01 peptide 2.7.10.2 N/A P07948 11955060
    60742 1waa:A (1.8) BS01 ZN 2.7.11.1 N/A Q8WZ42 19282960
    60743 1waa:B (1.8) BS01 ZN 2.7.11.1 N/A Q8WZ42 19282960
    60744 1waa:C (1.8) BS01 ZN 2.7.11.1 N/A Q8WZ42 19282960
    60745 1waa:D (1.8) BS01 ZN 2.7.11.1 N/A Q8WZ42 19282960
    60746 1waa:E (1.8) BS01 ZN 2.7.11.1 N/A Q8WZ42 19282960
    60747 1waa:F (1.8) BS01 ZN 2.7.11.1 N/A Q8WZ42 19282960
    60748 1wab:A (1.7) BS01 ACT 3.1.1.47 GO:0003847 ... Q29460 8985254
    60749 1wad:A (1.8) BS01 CA ? GO:0009055 ... P00133 8819167
    60750 1wad:A (1.8) BS02 HEM ? GO:0009055 ... P00133 8819167
    60751 1wad:A (1.8) BS03 HEM ? GO:0009055 ... P00133 8819167
    60752 1wad:A (1.8) BS04 HEM ? GO:0009055 ... P00133 8819167
    60753 1wad:A (1.8) BS05 HEM ? GO:0009055 ... P00133 8819167
    60754 1wae:A (1.95) BS01 CU 1.7.2.1 GO:0005507 ... O68601 15554622
    60755 1wae:A (1.95) BS02 ZN 1.7.2.1 GO:0005507 ... O68601 15554622
    60756 1waf:A (3.2) BS01 GMP 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 9215631
    60757 1waf:B (3.2) BS01 GMP 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 9215631
    60758 1waj:A (2.8) BS01 5GP 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 9215631
    60759 1wam:A (2.35) BS01 FAD 5.4.99.9 GO:0008767 ... Q48485 15843027
    60760 1wao:1 (2.9) BS01 MN 3.1.3.16 GO:0000165 ... P53041 15577939
    60761 1wao:1 (2.9) BS02 MN 3.1.3.16 GO:0000165 ... P53041 15577939
    60762 1wao:2 (2.9) BS01 MN 3.1.3.16 GO:0000165 ... P53041 15577939
    60763 1wao:2 (2.9) BS02 MN 3.1.3.16 GO:0000165 ... P53041 15577939
    60764 1wao:3 (2.9) BS01 MN 3.1.3.16 GO:0000165 ... P53041 15577939
    60765 1wao:3 (2.9) BS02 MN 3.1.3.16 GO:0000165 ... P53041 15577939
    60766 1wao:4 (2.9) BS01 MN 3.1.3.16 GO:0000165 ... P53041 15577939
    60767 1wao:4 (2.9) BS02 MN 3.1.3.16 GO:0000165 ... P53041 15577939
    60768 1wap:A (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60769 1wap:A (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60770 1wap:B (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60771 1wap:B (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60772 1wap:C (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60773 1wap:C (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60774 1wap:D (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60775 1wap:D (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60776 1wap:E (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60777 1wap:E (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60778 1wap:F (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60779 1wap:F (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60780 1wap:G (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60781 1wap:G (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60782 1wap:H (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60783 1wap:H (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60784 1wap:I (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60785 1wap:I (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60786 1wap:J (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60787 1wap:J (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60788 1wap:K (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60789 1wap:K (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60790 1wap:L (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60791 1wap:L (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60792 1wap:M (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60793 1wap:M (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60794 1wap:N (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60795 1wap:N (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60796 1wap:O (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60797 1wap:O (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60798 1wap:P (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    60799 1wap:P (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    60800 1wap:Q (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).