SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    624401 7ena:DA (4.07) BS01 dna 2.3.1.48
    2.7.11.1
    GO:0000122 ... P21675 33958484
    624402 7ena:DA (4.07) BS02 dna 2.3.1.48
    2.7.11.1
    GO:0000122 ... P21675 33958484
    624403 7ena:DP (4.07) BS01 dna ? GO:0000785 ... P20226 33958484
    624404 7ena:DP (4.07) BS02 dna ? GO:0000785 ... P20226 33958484
    624405 7ena:DQ (4.07) BS01 dna N/A GO:0005672 ... N/A 33958484
    624406 7ena:EA (4.07) BS01 ZN ? GO:0005515 ... P29083 33958484
    624407 7ena:FB (4.07) BS01 dna 3.6.4.12 GO:0003677 ... P13984 33958484
    624408 7ena:FB (4.07) BS02 dna 3.6.4.12 GO:0003677 ... P13984 33958484
    624409 7ena:PA (4.07) BS01 ZN N/A GO:0003677 ... N/A 33958484
    624410 7ena:PA (4.07) BS02 ZN N/A GO:0003677 ... N/A 33958484
    624411 7ena:PA (4.07) BS03 MG N/A GO:0003677 ... N/A 33958484
    624412 7ena:PB (4.07) BS01 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 33958484
    624413 7ena:PC (4.07) BS01 ZN ? GO:0000428 ... I3LCH3 33958484
    624414 7ena:PI (4.07) BS01 ZN ? GO:0000428 ... P60899 33958484
    624415 7ena:PI (4.07) BS02 ZN ? GO:0000428 ... P60899 33958484
    624416 7ena:PJ (4.07) BS01 ZN N/A GO:0003677 ... N/A 33958484
    624417 7ena:PL (4.07) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 33958484
    624418 7enb:A (2.3) BS01 H3X 1.14.11.- GO:0016114 ... A0A2I1BSX0 34285212
    624419 7enb:A (2.3) BS02 FE 1.14.11.- GO:0016114 ... A0A2I1BSX0 34285212
    624420 7enb:B (2.3) BS01 FE 1.14.11.- GO:0016114 ... A0A2I1BSX0 34285212
    624421 7enc:0 (4.13) BS01 ZN ? GO:0000082 ... P51948 33958484
    624422 7enc:0 (4.13) BS02 ZN ? GO:0000082 ... P51948 33958484
    624423 7enc:2 (4.13) BS01 ZN ? GO:0000438 ... Q13888 33958484
    624424 7enc:2 (4.13) BS02 ZN ? GO:0000438 ... Q13888 33958484
    624425 7enc:2 (4.13) BS03 ZN ? GO:0000438 ... Q13888 33958484
    624426 7enc:3 (4.13) BS01 ZN ? GO:0000438 ... Q13889 33958484
    624427 7enc:6 (4.13) BS01 dna 5.6.2.4 GO:0000112 ... P19447 33958484
    624428 7enc:6 (4.13) BS02 dna 5.6.2.4 GO:0000112 ... P19447 33958484
    624429 7enc:7 (4.13) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 33958484
    624430 7enc:BA (4.13) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 33958484
    624431 7enc:BA (4.13) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 33958484
    624432 7enc:BA (4.13) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 33958484
    624433 7enc:DP (4.13) BS01 dna ? GO:0000785 ... P20226 33958484
    624434 7enc:DP (4.13) BS02 dna ? GO:0000785 ... P20226 33958484
    624435 7enc:EA (4.13) BS01 ZN ? GO:0005515 ... P29083 33958484
    624436 7enc:FB (4.13) BS01 dna 3.6.4.12 GO:0003677 ... P13984 33958484
    624437 7enc:FB (4.13) BS02 dna 3.6.4.12 GO:0003677 ... P13984 33958484
    624438 7enc:PA (4.13) BS01 ZN N/A GO:0003677 ... N/A 33958484
    624439 7enc:PA (4.13) BS02 ZN N/A GO:0003677 ... N/A 33958484
    624440 7enc:PA (4.13) BS03 MG N/A GO:0003677 ... N/A 33958484
    624441 7enc:PB (4.13) BS01 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 33958484
    624442 7enc:PC (4.13) BS01 ZN ? GO:0000428 ... I3LCH3 33958484
    624443 7enc:PI (4.13) BS01 ZN ? GO:0000428 ... P60899 33958484
    624444 7enc:PI (4.13) BS02 ZN ? GO:0000428 ... P60899 33958484
    624445 7enc:PJ (4.13) BS01 ZN N/A GO:0003677 ... N/A 33958484
    624446 7enc:PL (4.13) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 33958484
    624447 7end:A (1.99) BS01 J7R 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6X7 36844503
    624448 7ene:A (2.98) BS01 J7R 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... K9N7C7 36844503
    624449 7ene:B (2.98) BS01 J7R 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... K9N7C7 36844503
    624450 7ene:C (2.98) BS01 J7R 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... K9N7C7 36844503
    624451 7ene:D (2.98) BS01 J7R 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... K9N7C7 36844503
    624452 7eni:A (2.632) BS01 rna 3.1.-.- GO:0003676 ... J7RUA5 N/A
    624453 7enj:0 (4.4) BS01 ZN ? GO:0000151 ... Q6P2C8 33958484
    624454 7enj:A (4.4) BS01 peptide ? GO:0000122 ... Q15648 33958484
    624455 7enl:A (2.2) BS01 MG 4.2.1.11 GO:0000015 ... P00924 2007120
    624456 7enl:A (2.2) BS02 2PG 4.2.1.11 GO:0000015 ... P00924 2007120
    624457 7enn:A (2.8) BS01 dna ? GO:0000786 ... P84233 34210977
    624458 7enn:A (2.8) BS02 dna ? GO:0000786 ... P84233 34210977
    624459 7enn:C (2.8) BS01 dna ? GO:0000786 ... P06897 34210977
    624460 7enn:C (2.8) BS02 dna ? GO:0000786 ... P06897 34210977
    624461 7enn:D (2.8) BS01 dna ? GO:0000786 ... P02281 34210977
    624462 7enn:D (2.8) BS02 dna ? GO:0000786 ... P02281 34210977
    624463 7enn:E (2.8) BS01 dna ? GO:0000786 ... P84233 34210977
    624464 7enn:E (2.8) BS02 dna ? GO:0000786 ... P84233 34210977
    624465 7enn:F (2.8) BS01 dna ? GO:0000786 ... P62799 34210977
    624466 7enn:F (2.8) BS02 dna ? GO:0000786 ... P62799 34210977
    624467 7enn:G (2.8) BS01 dna ? GO:0000786 ... P06897 34210977
    624468 7enn:G (2.8) BS02 dna ? GO:0000786 ... P06897 34210977
    624469 7enn:H (2.8) BS01 dna ? GO:0000786 ... P02281 34210977
    624470 7enn:H (2.8) BS02 dna ? GO:0000786 ... P02281 34210977
    624471 7enn:K (2.8) BS01 dna 3.6.4.- GO:0000166 ... Q86WJ1 34210977
    624472 7enn:K (2.8) BS02 dna 3.6.4.- GO:0000166 ... Q86WJ1 34210977
    624473 7enn:K (2.8) BS03 ADP 3.6.4.- GO:0000166 ... Q86WJ1 34210977
    624474 7enn:K (2.8) BS04 BEF 3.6.4.- GO:0000166 ... Q86WJ1 34210977
    624475 7enn:L (2.8) BS01 dna ? GO:0000786 ... P62799 34210977
    624476 7enn:L (2.8) BS02 dna ? GO:0000786 ... P62799 34210977
    624477 7enq:A (2.20497) BS01 J7F 2.4.2.12 GO:0005125 ... P43490 35459935
    624478 7enq:B (2.20497) BS01 J7F 2.4.2.12 GO:0005125 ... P43490 35459935
    624479 7enq:C (2.20497) BS01 J7F 2.4.2.12 GO:0005125 ... P43490 35459935
    624480 7enq:D (2.20497) BS01 J7F 2.4.2.12 GO:0005125 ... P43490 35459935
    624481 7enr:A (4.205) BS01 rna 3.1.-.- GO:0003676 ... J7RUA5 N/A
    624482 7ens:A (2.2) BS01 ATP 6.1.1.2 GO:0000166 ... P9WFT3 34908399
    624483 7ens:A (2.2) BS02 5BX 6.1.1.2 GO:0000166 ... P9WFT3 34908399
    624484 7ent:A (2.4) BS01 ATP 6.1.1.2 GO:0000166 ... P9WFT3 34908399
    624485 7ent:A (2.4) BS02 J9L 6.1.1.2 GO:0000166 ... P9WFT3 34908399
    624486 7enu:A (2.322) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    624487 7enu:A (2.322) BS02 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    624488 7enu:B (2.322) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    624489 7enu:B (2.322) BS02 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    624490 7env:A (2.45) BS01 BUX ? N/A P25440 35234137
    624491 7enz:A (1.7) BS01 LDR ? N/A P25440 35234137
    624492 7eo2:A (2.89) BS01 J89 ? GO:0004930 ... P21453 34937912 BindingDB: IC50=0.28nM, EC50=0.37nM, Ki=4.1nM
    624493 7eo3:A (1.141) BS01 MG N/A GO:0004553 ... N/A N/A
    624494 7eo4:A (2.86) BS01 J8C ? GO:0001525 ... P21453 34937912 BindingDB: EC50=0.400000nM
    624495 7eo5:A (2.0) BS01 BUX ? N/A P25440 35234137
    624496 7eo7:B (2.24917) BS01 FNO 3.4.19.12
    3.4.22.-
    GO:0008233 ... P0C6U6 34586857
    624497 7eo8:A (2.28085) BS01 FNO 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... P0C6U8 34586857
    624498 7eo9:A (2.57) BS01 ADP ? GO:0003777 ... P33173 35132656
    624499 7eob:A (1.76) BS01 AF3 ? GO:0003777 ... P33173 35132656
    624500 7eob:A (1.76) BS02 ADP ? GO:0003777 ... P33173 35132656
    624501 7eof:B (2.733) BS01 dna ? GO:0003677 ... Q86WR0 N/A
    624502 7eoq:A (4.1) BS01 7RC ? GO:0015276 ... Q12879 34186027
    624503 7eoq:C (4.1) BS01 7RC ? GO:0015276 ... Q12879 34186027
    624504 7eor:A (4.0) BS01 6RM ? GO:0015276 ... Q12879 34186027 BindingDB: EC50=382nM
    624505 7eor:B (4.0) BS01 6RM ? GO:0015276 ... Q05586 34186027
    624506 7eor:C (4.0) BS01 6RM ? GO:0015276 ... Q12879 34186027 BindingDB: EC50=382nM
    624507 7eor:D (4.0) BS01 6RM ? GO:0015276 ... Q05586 34186027
    624508 7eot:B (3.8) BS01 J86 ? GO:0015276 ... Q05586 34186027
    624509 7eot:D (3.8) BS01 J86 ? GO:0015276 ... Q05586 34186027
    624510 7eou:A (4.3) BS01 6RM ? GO:0015276 ... Q12879 34186027 BindingDB: EC50=382nM
    624511 7eou:B (4.3) BS01 6RM ? GO:0015276 ... Q05586 34186027
    624512 7eou:C (4.3) BS01 6RM ? GO:0015276 ... Q12879 34186027 BindingDB: EC50=382nM
    624513 7eou:D (4.3) BS01 6RM ? GO:0015276 ... Q05586 34186027
    624514 7eov:A (2.6) BS01 A3P 2.8.2.34 GO:0005737 ... Q8BGL3 34030040
    624515 7eov:A (2.6) BS02 CHD 2.8.2.34 GO:0005737 ... Q8BGL3 34030040
    624516 7eov:A (2.6) BS03 CHD 2.8.2.34 GO:0005737 ... Q8BGL3 34030040
    624517 7eoz:A (3.4) BS01 NAP 1.2.1.84 GO:0080019 ... Q8S7T9 N/A
    624518 7eoz:B (3.4) BS01 NAP 1.2.1.84 GO:0080019 ... Q8S7T9 N/A
    624519 7ep0:A (2.16) BS01 CGO ? N/A Q9C0D3 34214466
    624520 7ep0:A (2.16) BS02 CGO ? N/A Q9C0D3 34214466
    624521 7ep0:B (2.16) BS01 CGO ? N/A Q9C0D3 34214466
    624522 7ep0:B (2.16) BS02 CGO ? N/A Q9C0D3 34214466
    624523 7ep7:A (2.6) BS01 peptide ? N/A Q8VDU0 35687681
    624524 7epb:A (3.1) BS01 40F ? GO:0001641 ... Q14416 34135509 BindingDB: Ki=72nM, EC50=5.1nM, IC50=5.6nM
    624525 7epb:B (3.1) BS01 40F ? GO:0001641 ... Q14416 34135509 BindingDB: Ki=72nM, EC50=5.1nM, IC50=5.6nM
    624526 7epe:A (2.5) BS01 FMN ? GO:0004930 ... P00323
    Q14416
    34135509
    624527 7epe:A (2.5) BS02 J9R ? GO:0004930 ... P00323
    Q14416
    34135509
    624528 7epf:A (2.7) BS01 FMN ? GO:0004930 ... P00323
    Q14416
    34135509
    624529 7epf:A (2.7) BS02 J9U ? GO:0004930 ... P00323
    Q14416
    34135509
    624530 7epk:A (2.7) BS01 GDP 3.6.5.4 GO:0003723 ... Q9YB62 N/A
    624531 7epm:A (3.0) BS01 J9X 1.1.1.27 GO:0003824 ... P07864 35646544
    624532 7epm:A (3.0) BS02 NAD 1.1.1.27 GO:0003824 ... P07864 35646544
    624533 7epm:B (3.0) BS01 J9X 1.1.1.27 GO:0003824 ... P07864 35646544
    624534 7epm:B (3.0) BS02 NAD 1.1.1.27 GO:0003824 ... P07864 35646544
    624535 7epo:A (2.35) BS01 H5J ? N/A A0R7C6 33992958
    624536 7epq:A (2.2) BS01 SO4 ? GO:0016462 ... B2RHQ2 34214602
    624537 7epq:A (2.2) BS02 SO4 ? GO:0016462 ... B2RHQ2 34214602
    624538 7epq:A (2.2) BS03 SO4 ? GO:0016462 ... B2RHQ2 34214602
    624539 7epq:A (2.2) BS04 SO4 ? GO:0016462 ... B2RHQ2 34214602
    624540 7epq:A (2.2) BS05 MG ? GO:0016462 ... B2RHQ2 34214602
    624541 7epq:B (2.2) BS01 SO4 ? GO:0016462 ... B2RHQ2 34214602
    624542 7epq:B (2.2) BS02 SO4 ? GO:0016462 ... B2RHQ2 34214602
    624543 7epq:B (2.2) BS03 SO4 ? GO:0016462 ... B2RHQ2 34214602
    624544 7epq:B (2.2) BS04 SO4 ? GO:0016462 ... B2RHQ2 34214602
    624545 7epq:B (2.2) BS05 MG ? GO:0016462 ... B2RHQ2 34214602
    624546 7epq:B (2.2) BS06 MG ? GO:0016462 ... B2RHQ2 34214602
    624547 7epr:A (2.2) BS01 NAD N/A N/A N/A 34254784
    624548 7epr:B (2.2) BS01 NAD N/A N/A N/A 34254784
    624549 7epr:C (2.2) BS01 NAD N/A N/A N/A 34254784
    624550 7epr:D (2.2) BS01 NAD N/A N/A N/A 34254784
    624551 7eps:A (2.102) BS01 NAD N/A N/A N/A 34254784
    624552 7eps:A (2.102) BS02 THR N/A N/A N/A 34254784
    624553 7eps:B (2.102) BS01 NAD N/A N/A N/A 34254784
    624554 7eps:B (2.102) BS02 THR N/A N/A N/A 34254784
    624555 7eps:C (2.102) BS01 NAD N/A N/A N/A 34254784
    624556 7eps:C (2.102) BS02 THR N/A N/A N/A 34254784
    624557 7eps:D (2.102) BS01 NAD N/A N/A N/A 34254784
    624558 7eps:D (2.102) BS02 THR N/A N/A N/A 34254784
    624559 7epu:B (3.5) BS01 ADP 3.6.4.- GO:0000166 ... Q86WJ1 34210977
    624560 7epv:A (1.78) BS01 FDA 1.14.13.- GO:0000166 ... A0A3T0V9Y5 34895224
    624561 7epw:A (2.23) BS01 FDA 1.14.13.- GO:0000166 ... A0A3T0V9Y5 34895224
    624562 7epw:A (2.23) BS02 T1C 1.14.13.- GO:0000166 ... A0A3T0V9Y5 34895224
    624563 7epz:B (3.4) BS01 J9O ? GO:0003333 ... Q9UPY5 35352032
    624564 7eq2:A (1.5509) BS01 GDP 3.6.5.2 GO:0003924 ... P62820 N/A
    624565 7eq2:B (1.5509) BS01 GDP 3.6.5.2 GO:0003924 ... P62820 N/A
    624566 7eq7:A (2.111) BS01 CA ? GO:0001525 ... P07355 N/A
    624567 7eq7:A (2.111) BS02 CA ? GO:0001525 ... P07355 N/A
    624568 7eqd:0 (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    624569 7eqd:0 (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    624570 7eqd:0 (2.76) BS03 CRT ? GO:0016020 ... Q2RQ23 34323477
    624571 7eqd:0 (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    624572 7eqd:1 (2.76) BS01 CRT ? GO:0005886 ... P02947 34323477
    624573 7eqd:1 (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    624574 7eqd:1 (2.76) BS03 CRT ? GO:0005886 ... P02947 34323477
    624575 7eqd:1 (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    624576 7eqd:1 (2.76) BS05 CRT ? GO:0005886 ... P02947 34323477
    624577 7eqd:2 (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    624578 7eqd:2 (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    624579 7eqd:2 (2.76) BS03 CRT ? GO:0016020 ... Q2RQ23 34323477
    624580 7eqd:2 (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    624581 7eqd:3 (2.76) BS01 CRT ? GO:0005886 ... P02947 34323477
    624582 7eqd:3 (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    624583 7eqd:3 (2.76) BS03 CRT ? GO:0005886 ... P02947 34323477
    624584 7eqd:3 (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    624585 7eqd:3 (2.76) BS05 CRT ? GO:0005886 ... P02947 34323477
    624586 7eqd:4 (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    624587 7eqd:4 (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    624588 7eqd:4 (2.76) BS03 CRT ? GO:0016020 ... Q2RQ23 34323477
    624589 7eqd:4 (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    624590 7eqd:5 (2.76) BS01 CRT ? GO:0005886 ... P02947 34323477
    624591 7eqd:5 (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    624592 7eqd:5 (2.76) BS03 CRT ? GO:0005886 ... P02947 34323477
    624593 7eqd:5 (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    624594 7eqd:5 (2.76) BS05 CRT ? GO:0005886 ... P02947 34323477
    624595 7eqd:6 (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    624596 7eqd:6 (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    624597 7eqd:6 (2.76) BS03 CRT ? GO:0016020 ... Q2RQ23 34323477
    624598 7eqd:6 (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    624599 7eqd:7 (2.76) BS01 CRT ? GO:0005886 ... P02947 34323477
    624600 7eqd:7 (2.76) BS02 07D ? GO:0005886 ... P02947 34323477

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).