SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6601 1can:A (1.9) BS01 NO3 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 1336460 BindingDB: Ki=35000000nM
    6602 1cao:A (1.9) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 1336460
    6603 1caq:A (1.8) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    6604 1caq:A (1.8) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    6605 1caq:A (1.8) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    6606 1caq:A (1.8) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    6607 1caq:A (1.8) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    6608 1caq:A (1.8) BS06 DPS 3.4.24.17 GO:0004222 ... P08254 10422833 MOAD: Ki=19nM
    6609 1cay:A (2.1) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 15299482
    6610 1caz:A (1.9) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 15299482
    6611 1cb0:A (1.7) BS01 ADE 2.4.2.28 GO:0003824 ... Q13126 10404592
    6612 1cb2:A (2.0) BS01 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6613 1cb2:A (2.0) BS02 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6614 1cb2:A (2.0) BS03 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6615 1cb2:A (2.0) BS04 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6616 1cb2:A (2.0) BS05 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6617 1cb2:A (2.0) BS06 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6618 1cb2:B (2.0) BS01 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6619 1cb2:B (2.0) BS02 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6620 1cb2:B (2.0) BS03 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6621 1cb2:B (2.0) BS04 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6622 1cb2:B (2.0) BS05 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6623 1cb2:B (2.0) BS06 MAN 3.2.1.91 GO:0004553 ... P07987 8875646
    6624 1cb4:A (2.3) BS01 CU 1.15.1.1 GO:0000209 ... P00442 10092461
    6625 1cb4:A (2.3) BS02 CU 1.15.1.1 GO:0000209 ... P00442 10092461
    6626 1cb4:B (2.3) BS01 CU 1.15.1.1 GO:0000209 ... P00442 10092461
    6627 1cb4:B (2.3) BS02 ZN 1.15.1.1 GO:0000209 ... P00442 10092461
    6628 1cb6:A (2.0) BS01 CL 3.4.21.- GO:0001530 ... P02788 10089508
    6629 1cb6:A (2.0) BS02 CL 3.4.21.- GO:0001530 ... P02788 10089508
    6630 1cb7:A (2.0) BS01 COB 5.4.99.1 GO:0005515 ... P80078 10467146
    6631 1cb7:B (2.0) BS01 COB 5.4.99.1 GO:0003824 ... P80077 10467146
    6632 1cb7:C (2.0) BS01 COB 5.4.99.1 GO:0005515 ... P80078 10467146
    6633 1cb7:D (2.0) BS01 COB 5.4.99.1 GO:0003824 ... P80077 10467146
    6634 1cb8:A (1.9) BS01 MAN 4.2.2.5 GO:0005576 ... Q59288 10329169
    6635 1cb8:A (1.9) BS02 GCU 4.2.2.5 GO:0005576 ... Q59288 10329169
    6636 1cb8:A (1.9) BS03 CA 4.2.2.5 GO:0005576 ... Q59288 10329169
    6637 1cbf:A (2.4) BS01 SAH 2.1.1.271 GO:0008168 ... O87696 9665173
    6638 1cbj:A (1.65) BS01 CU 1.15.1.1 GO:0000209 ... P00442 10092461
    6639 1cbj:A (1.65) BS02 ZN 1.15.1.1 GO:0000209 ... P00442 10092461
    6640 1cbj:B (1.65) BS01 CU 1.15.1.1 GO:0000209 ... P00442 10092461
    6641 1cbj:B (1.65) BS02 ZN 1.15.1.1 GO:0000209 ... P00442 10092461
    6642 1cbk:A (2.02) BS01 SO4 2.7.6.3 GO:0003848 ... P43777 10080886
    6643 1cbk:A (2.02) BS02 ROI 2.7.6.3 GO:0003848 ... P43777 10080886
    6644 1cbk:B (2.02) BS01 SO4 2.7.6.3 GO:0003848 ... P43777 10080886
    6645 1cbk:B (2.02) BS02 ROI 2.7.6.3 GO:0003848 ... P43777 10080886
    6646 1cbl:A (1.8) BS01 HEM ? GO:0004601 ... P68871 8114097
    6647 1cbl:B (1.8) BS01 HEM ? GO:0004601 ... P68871 8114097
    6648 1cbl:C (1.8) BS01 HEM ? GO:0004601 ... P68871 8114097
    6649 1cbl:D (1.8) BS01 HEM ? GO:0004601 ... P68871 8114097
    6650 1cbm:A (1.74) BS01 HEM ? GO:0004601 ... P68871 8114096
    6651 1cbm:B (1.74) BS01 HEM ? GO:0004601 ... P68871 8114096
    6652 1cbm:C (1.74) BS01 HEM ? GO:0004601 ... P68871 8114096
    6653 1cbm:D (1.74) BS01 HEM ? GO:0004601 ... P68871 8114096
    6654 1cbo:A (1.8) BS01 FAD 1.1.3.6
    5.3.3.1
    GO:0004769 ... P12676 10194345
    6655 1cbq:A (2.2) BS01 RE9 ? GO:0001972 ... P29373 7704533
    6656 1cbr:A (2.9) BS01 REA ? GO:0001972 ... P62965 7704533 BindingDB: Kd=>200nM
    6657 1cbr:B (2.9) BS01 REA ? GO:0001972 ... P62965 7704533 BindingDB: Kd=>200nM
    6658 1cbs:A (1.8) BS01 REA ? GO:0001972 ... P29373 7704533
    6659 1cbv:H (2.66) BS01 dna ? N/A P01867 1749770
    6660 1cbv:L (2.66) BS01 dna ? GO:0005576 ... A2NHM3 1749770
    6661 1cbw:B (2.6) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 9300481
    6662 1cbw:C (2.6) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 9300481
    6663 1cbw:G (2.6) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 9300481
    6664 1cbw:H (2.6) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 9300481
    6665 1cbx:A (2.0) BS01 ZN 3.4.17.1 GO:0004181 ... P00730 1738164
    6666 1cbx:A (2.0) BS02 BZS 3.4.17.1 GO:0004181 ... P00730 1738164 MOAD: Ki=0.45uM
    BindingDB: Ki=500nM
    6667 1cc0:A (5.0) BS01 MG 3.6.5.2 GO:0000281 ... P61586 10489445
    6668 1cc0:A (5.0) BS02 GDP 3.6.5.2 GO:0000281 ... P61586 10489445
    6669 1cc0:C (5.0) BS01 MG 3.6.5.2 GO:0000281 ... P61586 10489445
    6670 1cc0:C (5.0) BS02 GDP 3.6.5.2 GO:0000281 ... P61586 10489445
    6671 1cc1:L (2.15) BS01 SF4 1.12.99.6 GO:0008901 ... P13065 10378275
    6672 1cc1:L (2.15) BS02 NI 1.12.99.6 GO:0008901 ... P13065 10378275
    6673 1cc1:L (2.15) BS03 FE2 1.12.99.6 GO:0008901 ... P13065 10378275
    6674 1cc1:L (2.15) BS04 FCO 1.12.99.6 GO:0008901 ... P13065 10378275
    6675 1cc1:S (2.15) BS01 SF4 1.12.99.6 GO:0008901 ... P13063 10378275
    6676 1cc1:S (2.15) BS02 SF4 1.12.99.6 GO:0008901 ... P13063 10378275
    6677 1cc1:S (2.15) BS03 SF4 1.12.99.6 GO:0008901 ... P13063 10378275
    6678 1cc2:A (2.2) BS01 FAD 1.1.3.6
    5.3.3.1
    GO:0004769 ... P12676 10194345
    6679 1cc3:A (1.65) BS01 CU ? GO:0005507 ... P00282 10231517
    6680 1cc3:A (1.65) BS02 CU ? GO:0005507 ... P00282 10231517
    6681 1cc3:B (1.65) BS01 CU ? GO:0005507 ... P00282 10231517
    6682 1cc3:B (1.65) BS02 CU ? GO:0005507 ... P00282 10231517
    6683 1cc4:A (2.0) BS01 FAD 1.14.13.2 GO:0016491 ... P00438 10025942
    6684 1cc5:A (2.5) BS01 HEM ? GO:0005506 ... P11732 2993632
    6685 1cc6:A (2.2) BS01 FAD 1.14.13.2 GO:0016491 ... P00438 10025942
    6686 1cca:A (1.8) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 8384877
    6687 1ccb:A (2.1) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 8384877
    6688 1ccc:A (2.0) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 8384877
    6689 1cce:A (2.3) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 7809133
    6690 1ccg:A (2.1) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 7809133
    6691 1ccg:A (2.1) BS02 IMD 1.11.1.5 GO:0004601 ... P00431 7809133
    6692 1cch:A (-1.00) BS01 HEC ? GO:0005506 ... P00101 1327105
    6693 1cci:A (2.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 8673607
    6694 1ccj:A (2.1) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 9514261
    6695 1cck:A (2.1) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 7703247
    6696 1ccl:A (2.0) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 N/A
    6697 1ccp:A (2.2) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 2169873
    6698 1ccr:A (1.5) BS01 HEC ? GO:0005758 ... Q0DI31 6304326
    6699 1ccs:A (2.35) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 7761440
    6700 1cct:A (2.2) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 7761440
    6701 1ccu:A (2.25) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 7761440
    6702 1ccw:A (1.6) BS01 CNC 5.4.99.1 GO:0005515 ... P80078 10467146
    6703 1ccw:B (1.6) BS01 CNC 5.4.99.1 GO:0003824 ... P80077 10467146
    6704 1ccw:C (1.6) BS01 CNC 5.4.99.1 GO:0005515 ... P80078 10467146
    6705 1ccw:D (1.6) BS01 CNC 5.4.99.1 GO:0003824 ... P80077 10467146
    6706 1cd2:A (2.2) BS01 NAP 1.5.1.3 GO:0003729 ... P16184 10194348
    6707 1cde:A (2.5) BS01 GAR 2.1.2.2 GO:0003824 ... P08179 1631098
    6708 1cde:A (2.5) BS02 DZF 2.1.2.2 GO:0003824 ... P08179 1631098
    6709 1cde:B (2.5) BS01 GAR 2.1.2.2 GO:0003824 ... P08179 1631098
    6710 1cde:B (2.5) BS02 DZF 2.1.2.2 GO:0003824 ... P08179 1631098
    6711 1cde:C (2.5) BS01 GAR 2.1.2.2 GO:0003824 ... P08179 1631098
    6712 1cde:C (2.5) BS02 DZF 2.1.2.2 GO:0003824 ... P08179 1631098
    6713 1cde:D (2.5) BS01 GAR 2.1.2.2 GO:0003824 ... P08179 1631098
    6714 1cde:D (2.5) BS02 DZF 2.1.2.2 GO:0003824 ... P08179 1631098
    6715 1cdg:A (2.0) BS01 GLC 2.4.1.19 GO:0003824 ... P43379 8107143
    6716 1cdg:A (2.0) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 8107143
    6717 1cdg:A (2.0) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 8107143
    6718 1cdg:A (2.0) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 8107143
    6719 1cdg:A (2.0) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 8107143
    6720 1cdg:A (2.0) BS06 CA 2.4.1.19 GO:0003824 ... P43379 8107143
    6721 1cdg:A (2.0) BS07 CA 2.4.1.19 GO:0003824 ... P43379 8107143
    6722 1cdk:A (2.0) BS01 peptide 2.7.11.11 GO:0001669 ... P36887 8384554
    6723 1cdk:A (2.0) BS02 MN 2.7.11.11 GO:0001669 ... P36887 8384554
    6724 1cdk:A (2.0) BS03 ANP 2.7.11.11 GO:0001669 ... P36887 8384554
    6725 1cdk:B (2.0) BS01 peptide 2.7.11.11 GO:0001669 ... P36887 8384554
    6726 1cdk:B (2.0) BS02 MN 2.7.11.11 GO:0001669 ... P36887 8384554
    6727 1cdk:B (2.0) BS03 ANP 2.7.11.11 GO:0001669 ... P36887 8384554
    6728 1cdl:A (2.0) BS01 peptide ? GO:0000922 ... P0DP23 1519061
    6729 1cdl:A (2.0) BS02 CA ? GO:0000922 ... P0DP23 1519061
    6730 1cdl:A (2.0) BS03 CA ? GO:0000922 ... P0DP23 1519061
    6731 1cdl:A (2.0) BS04 CA ? GO:0000922 ... P0DP23 1519061
    6732 1cdl:A (2.0) BS05 CA ? GO:0000922 ... P0DP23 1519061
    6733 1cdl:B (2.0) BS01 peptide ? GO:0000922 ... P0DP23 1519061
    6734 1cdl:B (2.0) BS02 CA ? GO:0000922 ... P0DP23 1519061
    6735 1cdl:B (2.0) BS03 CA ? GO:0000922 ... P0DP23 1519061
    6736 1cdl:B (2.0) BS04 CA ? GO:0000922 ... P0DP23 1519061
    6737 1cdl:B (2.0) BS05 CA ? GO:0000922 ... P0DP23 1519061
    6738 1cdl:C (2.0) BS01 peptide ? GO:0000922 ... P0DP23 1519061
    6739 1cdl:C (2.0) BS02 peptide ? GO:0000922 ... P0DP23 1519061
    6740 1cdl:C (2.0) BS03 CA ? GO:0000922 ... P0DP23 1519061
    6741 1cdl:C (2.0) BS04 CA ? GO:0000922 ... P0DP23 1519061
    6742 1cdl:C (2.0) BS05 CA ? GO:0000922 ... P0DP23 1519061
    6743 1cdl:C (2.0) BS06 CA ? GO:0000922 ... P0DP23 1519061
    6744 1cdl:D (2.0) BS01 peptide ? GO:0000922 ... P0DP23 1519061
    6745 1cdl:D (2.0) BS02 CA ? GO:0000922 ... P0DP23 1519061
    6746 1cdl:D (2.0) BS03 CA ? GO:0000922 ... P0DP23 1519061
    6747 1cdl:D (2.0) BS04 CA ? GO:0000922 ... P0DP23 1519061
    6748 1cdl:D (2.0) BS05 CA ? GO:0000922 ... P0DP23 1519061
    6749 1cdm:A (2.0) BS01 peptide ? GO:0000922 ... P62157 8259515
    6750 1cdm:A (2.0) BS02 CA ? GO:0000922 ... P62157 8259515
    6751 1cdm:A (2.0) BS03 CA ? GO:0000922 ... P62157 8259515
    6752 1cdm:A (2.0) BS04 CA ? GO:0000922 ... P62157 8259515
    6753 1cdm:A (2.0) BS05 CA ? GO:0000922 ... P62157 8259515
    6754 1cdo:A (2.05) BS01 ZN 1.1.1.1 GO:0004022 ... P26325 8845755
    6755 1cdo:A (2.05) BS02 ZN 1.1.1.1 GO:0004022 ... P26325 8845755
    6756 1cdo:A (2.05) BS03 NAD 1.1.1.1 GO:0004022 ... P26325 8845755
    6757 1cdo:B (2.05) BS01 ZN 1.1.1.1 GO:0004022 ... P26325 8845755
    6758 1cdo:B (2.05) BS02 ZN 1.1.1.1 GO:0004022 ... P26325 8845755
    6759 1cdo:B (2.05) BS03 NAD 1.1.1.1 GO:0004022 ... P26325 8845755
    6760 1cdp:A (1.6) BS01 CD ? GO:0005509 ... P02618 2777802
    6761 1cdp:A (1.6) BS02 CD ? GO:0005509 ... P02618 2777802
    6762 1cdw:A (1.9) BS01 dna ? GO:0003677 ... P20226 8643494
    6763 1cdw:A (1.9) BS02 dna ? GO:0003677 ... P20226 8643494
    6764 1ce1:H (1.9) BS01 peptide ? N/A Q6PYX1 10366506
    6765 1ce1:L (1.9) BS01 peptide N/A N/A N/A 10366506
    6766 1ce2:A (2.5) BS01 FE 3.4.21.- GO:0001817 ... O77698 10531476
    6767 1ce2:A (2.5) BS02 FE 3.4.21.- GO:0001817 ... O77698 10531476
    6768 1ce2:A (2.5) BS03 CO3 3.4.21.- GO:0001817 ... O77698 10531476
    6769 1ce2:A (2.5) BS04 CO3 3.4.21.- GO:0001817 ... O77698 10531476
    6770 1ce5:A (1.9) BS01 CA 3.4.21.4 GO:0004175 ... P00760 10651279
    6771 1ce5:A (1.9) BS02 BEN 3.4.21.4 GO:0004175 ... P00760 10651279 MOAD: Ki=18.4uM
    6772 1ce6:A (2.9) BS01 peptide ? N/A P01899 10023771
    6773 1ce8:A (2.1) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6774 1ce8:A (2.1) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6775 1ce8:A (2.1) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6776 1ce8:A (2.1) BS04 PO4 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6777 1ce8:A (2.1) BS05 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6778 1ce8:A (2.1) BS06 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6779 1ce8:A (2.1) BS07 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6780 1ce8:A (2.1) BS08 IMP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6781 1ce8:A (2.1) BS09 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6782 1ce8:B (2.1) BS01 ORN 6.3.5.5 GO:0004088 ... P0A6F1 10428826
    6783 1ce8:C (2.1) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6784 1ce8:C (2.1) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6785 1ce8:C (2.1) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6786 1ce8:C (2.1) BS04 PO4 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6787 1ce8:C (2.1) BS05 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6788 1ce8:C (2.1) BS06 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6789 1ce8:C (2.1) BS07 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6790 1ce8:C (2.1) BS08 IMP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6791 1ce8:C (2.1) BS09 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6792 1ce8:D (2.1) BS01 ORN 6.3.5.5 GO:0004088 ... P0A6F1 10428826
    6793 1ce8:E (2.1) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6794 1ce8:E (2.1) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6795 1ce8:E (2.1) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6796 1ce8:E (2.1) BS04 PO4 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6797 1ce8:E (2.1) BS05 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6798 1ce8:E (2.1) BS06 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6799 1ce8:E (2.1) BS07 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6800 1ce8:E (2.1) BS08 IMP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).