SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6801 1ce8:E (2.1) BS09 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6802 1ce8:F (2.1) BS01 ORN 6.3.5.5 GO:0004088 ... P0A6F1 10428826
    6803 1ce8:G (2.1) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6804 1ce8:G (2.1) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6805 1ce8:G (2.1) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6806 1ce8:G (2.1) BS04 PO4 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6807 1ce8:G (2.1) BS05 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6808 1ce8:G (2.1) BS06 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6809 1ce8:G (2.1) BS07 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6810 1ce8:G (2.1) BS08 IMP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6811 1ce8:G (2.1) BS09 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10428826
    6812 1cea:A (2.06) BS01 ACA 3.4.21.7 N/A P00747 8611560 MOAD: Kd~11uM
    BindingDB: Ki=53000000nM, Kd=9000nM, IC50=105000nM
    6813 1cea:B (2.06) BS01 ACA 3.4.21.7 N/A P00747 8611560 MOAD: Kd~11uM
    BindingDB: Ki=53000000nM, Kd=9000nM, IC50=105000nM
    6814 1ceb:A (2.07) BS01 AMH 3.4.21.7 N/A P00747 8611560 MOAD: Kd~1uM
    BindingDB: Kd=1100nM, IC50=3100nM, Ki=25000000nM
    6815 1ceb:B (2.07) BS01 AMH 3.4.21.7 N/A P00747 8611560 MOAD: Kd~1uM
    BindingDB: Kd=1100nM, IC50=3100nM, Ki=25000000nM
    6816 1ced:A (-1.00) BS01 HEM ? GO:0005506 ... Q09099 N/A
    6817 1cee:A (-1.00) BS01 MG 3.6.5.2 GO:0000139 ... P60953 10360578
    6818 1cef:A (2.04) BS01 CEF 3.4.16.4 GO:0005576 ... P15555 7626623
    6819 1ceg:A (1.8) BS01 CEP 3.4.16.4 GO:0005576 ... P15555 7626623
    6820 1ceh:A (1.9) BS01 CA 3.1.1.4 GO:0002227 ... P00593 7703854
    6821 1cel:A (1.8) BS01 BGC 3.2.1.91 GO:0004553 ... P62694 8036495
    6822 1cel:A (1.8) BS02 CA 3.2.1.91 GO:0004553 ... P62694 8036495
    6823 1cel:A (1.8) BS03 IBZ 3.2.1.91 GO:0004553 ... P62694 8036495
    6824 1cel:B (1.8) BS01 GLC 3.2.1.91 GO:0004553 ... P62694 8036495
    6825 1cel:B (1.8) BS02 IBZ 3.2.1.91 GO:0004553 ... P62694 8036495
    6826 1cen:A (2.3) BS01 BGC 3.2.1.4 GO:0000272 ... P0C2S3 8632467
    6827 1cen:A (2.3) BS02 BGC 3.2.1.4 GO:0000272 ... P0C2S3 8632467
    6828 1cer:A (2.5) BS01 NAD 1.2.1.12 GO:0004365 ... P00361 8611563
    6829 1cer:B (2.5) BS01 NAD 1.2.1.12 GO:0004365 ... P00361 8611563
    6830 1cer:C (2.5) BS01 NAD 1.2.1.12 GO:0004365 ... P00361 8611563
    6831 1cer:D (2.5) BS01 NAD 1.2.1.12 GO:0004365 ... P00361 8611563
    6832 1cer:O (2.5) BS01 NAD 1.2.1.12 GO:0004365 ... P00361 8611563
    6833 1cer:P (2.5) BS01 NAD 1.2.1.12 GO:0004365 ... P00361 8611563
    6834 1cer:Q (2.5) BS01 NAD 1.2.1.12 GO:0004365 ... P00361 8611563
    6835 1cer:R (2.5) BS01 NAD 1.2.1.12 GO:0004365 ... P00361 8611563
    6836 1cet:A (2.05) BS01 CLQ 1.1.1.27 GO:0003824 ... Q27743 10187806 MOAD: Ki=1.3mM
    6837 1cev:A (2.4) BS01 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6838 1cev:A (2.4) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6839 1cev:B (2.4) BS01 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6840 1cev:B (2.4) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6841 1cev:C (2.4) BS01 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6842 1cev:C (2.4) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6843 1cev:D (2.4) BS01 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6844 1cev:D (2.4) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6845 1cev:E (2.4) BS01 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6846 1cev:E (2.4) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6847 1cev:F (2.4) BS01 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6848 1cev:F (2.4) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    6849 1cez:A (2.4) BS01 dna 2.7.7.6 GO:0000428 ... P00573 10331394
    6850 1cez:A (2.4) BS02 dna 2.7.7.6 GO:0000428 ... P00573 10331394
    6851 1cf0:A (2.2) BS01 peptide ? GO:0000774 ... P07737 10404225
    6852 1cf0:B (2.2) BS01 peptide ? GO:0000774 ... P07737 10404225
    6853 1cf2:O (2.1) BS01 NAP 1.2.1.59 GO:0004365 ... P10618 10393306
    6854 1cf2:P (2.1) BS01 NAP 1.2.1.59 GO:0004365 ... P10618 10393306
    6855 1cf2:Q (2.1) BS01 NAP 1.2.1.59 GO:0004365 ... P10618 10393306
    6856 1cf2:R (2.1) BS01 NAP 1.2.1.59 GO:0004365 ... P10618 10393306
    6857 1cf3:A (1.9) BS01 FAD 1.1.3.4 GO:0005576 ... P13006 10216293
    6858 1cf4:A (-1.00) BS01 MG 3.6.5.2 GO:0000139 ... P60953 10360579
    6859 1cf4:A (-1.00) BS02 GNP 3.6.5.2 GO:0000139 ... P60953 10360579
    6860 1cf7:A (2.6) BS01 dna ? GO:0000978 ... Q16254 10090723
    6861 1cf7:A (2.6) BS02 dna ? GO:0000978 ... Q16254 10090723
    6862 1cf7:B (2.6) BS01 dna ? GO:0005667 ... Q14188 10090723
    6863 1cf7:B (2.6) BS02 dna ? GO:0005667 ... Q14188 10090723
    6864 1cf8:H (2.7) BS01 HAZ ? N/A P01867 N/A
    6865 1cf8:L (2.7) BS01 HAZ ? GO:0002250 ... P01837 N/A
    6866 1cf9:A (1.8) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 10488114
    6867 1cf9:B (1.8) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 10488114
    6868 1cf9:C (1.8) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 10488114
    6869 1cf9:D (1.8) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 10488114
    6870 1cfa:A (-1.00) BS01 peptide ? GO:0005576 ... P01031 9007977
    6871 1cff:A (-1.00) BS01 peptide ? GO:0005102 ... P0DP33 10493800
    6872 1cff:A (-1.00) BS02 CA ? GO:0005102 ... P0DP33 10493800
    6873 1cff:A (-1.00) BS03 CA ? GO:0005102 ... P0DP33 10493800
    6874 1cff:A (-1.00) BS04 CA ? GO:0005102 ... P0DP33 10493800
    6875 1cff:A (-1.00) BS05 CA ? GO:0005102 ... P0DP33 10493800
    6876 1cfj:A (2.6) BS01 GB 3.1.1.7 GO:0001507 ... P04058 10353814
    6877 1cfm:A (2.0) BS01 HEM ? GO:0005506 ... P23577 10869174
    6878 1cfm:B (2.0) BS01 HEM ? GO:0005506 ... P23577 10869174
    6879 1cfm:C (2.0) BS01 HEM ? GO:0005506 ... P23577 10869174
    6880 1cfn:A (2.65) BS01 peptide ? GO:0002250 ... P01837 9413990
    6881 1cfn:B (2.65) BS01 peptide ? N/A P01864 9413990
    6882 1cfs:A (2.75) BS01 peptide ? GO:0002250 ... P01837 9413990
    6883 1cfs:B (2.75) BS01 peptide ? N/A P01864 9413990
    6884 1cft:A (2.8) BS01 peptide ? GO:0002250 ... P01837 9413990
    6885 1cft:B (2.8) BS01 peptide ? N/A P01864 9413990
    6886 1cfv:H (2.1) BS01 E3G ? GO:0003823 ... P18524 9261086 MOAD: Ka~100000000M^-1
    6887 1cfv:L (2.1) BS01 ZN ? GO:0005576 ... P01631 9261086
    6888 1cfv:L (2.1) BS02 ZN ? GO:0005576 ... P01631 9261086
    6889 1cfv:L (2.1) BS03 E3G ? GO:0005576 ... P01631 9261086
    6890 1cfz:A (2.2) BS01 CD 3.4.23.- GO:0004175 ... P37182 10331925
    6891 1cfz:B (2.2) BS01 CD 3.4.23.- GO:0004175 ... P37182 10331925
    6892 1cfz:C (2.2) BS01 CD 3.4.23.- GO:0004175 ... P37182 10331925
    6893 1cfz:D (2.2) BS01 CD 3.4.23.- GO:0004175 ... P37182 10331925
    6894 1cfz:E (2.2) BS01 CD 3.4.23.- GO:0004175 ... P37182 10331925
    6895 1cfz:F (2.2) BS01 CD 3.4.23.- GO:0004175 ... P37182 10331925
    6896 1cg0:A (2.5) BS01 MG 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6897 1cg0:A (2.5) BS02 HDA 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6898 1cg0:A (2.5) BS03 IMO 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6899 1cg0:A (2.5) BS04 GDP 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6900 1cg1:A (2.5) BS01 MG 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6901 1cg1:A (2.5) BS02 HDA 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6902 1cg1:A (2.5) BS03 IMO 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6903 1cg1:A (2.5) BS04 GDP 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6904 1cg2:A (2.5) BS01 ZN 3.4.17.11 GO:0004180 ... P06621 9083113
    6905 1cg2:A (2.5) BS02 ZN 3.4.17.11 GO:0004180 ... P06621 9083113
    6906 1cg2:B (2.5) BS01 ZN 3.4.17.11 GO:0004180 ... P06621 9083113
    6907 1cg2:B (2.5) BS02 ZN 3.4.17.11 GO:0004180 ... P06621 9083113
    6908 1cg2:C (2.5) BS01 ZN 3.4.17.11 GO:0004180 ... P06621 9083113
    6909 1cg2:C (2.5) BS02 ZN 3.4.17.11 GO:0004180 ... P06621 9083113
    6910 1cg2:D (2.5) BS01 ZN 3.4.17.11 GO:0004180 ... P06621 9083113
    6911 1cg2:D (2.5) BS02 ZN 3.4.17.11 GO:0004180 ... P06621 9083113
    6912 1cg3:A (2.5) BS01 MG 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6913 1cg3:A (2.5) BS02 HDA 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6914 1cg3:A (2.5) BS03 IMO 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6915 1cg3:A (2.5) BS04 GDP 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6916 1cg4:A (2.5) BS01 MG 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6917 1cg4:A (2.5) BS02 IMO 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6918 1cg4:A (2.5) BS03 GDP 6.3.4.4 GO:0000166 ... P0A7D4 10346917
    6919 1cg5:A (1.6) BS01 HEM ? GO:0004601 ... P56691 10393295
    6920 1cg5:B (1.6) BS01 HEM ? GO:0004601 ... P56692 10393295
    6921 1cg6:A (1.7) BS01 SO4 2.4.2.28 GO:0003824 ... Q13126 10404592
    6922 1cg6:A (1.7) BS02 MTA 2.4.2.28 GO:0003824 ... Q13126 10404592
    6923 1cg8:A (1.9) BS01 HEM ? GO:0004601 ... P56691 10393295
    6924 1cg8:B (1.9) BS01 HEM ? GO:0004601 ... P56692 10393295
    6925 1cg9:A (2.7) BS01 peptide ? N/A P01889 N/A
    6926 1cge:A (1.9) BS01 ZN 3.4.24.7 GO:0004222 ... P03956 8031754
    6927 1cge:A (1.9) BS02 ZN 3.4.24.7 GO:0004222 ... P03956 8031754
    6928 1cge:A (1.9) BS03 CA 3.4.24.7 GO:0004222 ... P03956 8031754
    6929 1cge:A (1.9) BS04 CA 3.4.24.7 GO:0004222 ... P03956 8031754
    6930 1cge:A (1.9) BS05 CA 3.4.24.7 GO:0004222 ... P03956 8031754
    6931 1cgf:A (2.1) BS01 ZN 3.4.24.7 GO:0004222 ... P03956 8031754
    6932 1cgf:A (2.1) BS02 ZN 3.4.24.7 GO:0004222 ... P03956 8031754
    6933 1cgf:A (2.1) BS03 CA 3.4.24.7 GO:0004222 ... P03956 8031754
    6934 1cgf:A (2.1) BS04 CA 3.4.24.7 GO:0004222 ... P03956 8031754
    6935 1cgf:A (2.1) BS05 CA 3.4.24.7 GO:0004222 ... P03956 8031754
    6936 1cgf:B (2.1) BS01 ZN 3.4.24.7 GO:0004222 ... P03956 8031754
    6937 1cgf:B (2.1) BS02 ZN 3.4.24.7 GO:0004222 ... P03956 8031754
    6938 1cgf:B (2.1) BS03 CA 3.4.24.7 GO:0004222 ... P03956 8031754
    6939 1cgf:B (2.1) BS04 CA 3.4.24.7 GO:0004222 ... P03956 8031754
    6940 1cgf:B (2.1) BS05 CA 3.4.24.7 GO:0004222 ... P03956 8031754
    6941 1cgh:A (1.8) BS01 1ZG 3.4.21.20 GO:0002003 ... P08311 8896442
    6942 1cgk:A (1.84) BS01 NAR 2.3.1.74 GO:0009058 ... P30074 10426957
    6943 1cgl:A (2.4) BS01 ZN 3.4.24.7 GO:0004222 ... P03956 8278810
    6944 1cgl:A (2.4) BS02 ZN 3.4.24.7 GO:0004222 ... P03956 8278810
    6945 1cgl:A (2.4) BS03 CA 3.4.24.7 GO:0004222 ... P03956 8278810
    6946 1cgl:A (2.4) BS04 0ED 3.4.24.7 GO:0004222 ... P03956 8278810 MOAD: Ki=135nM
    6947 1cgl:A (2.4) BS05 0ED 3.4.24.7 GO:0004222 ... P03956 8278810 MOAD: Ki=135nM
    6948 1cgl:B (2.4) BS01 0ED 3.4.24.7 GO:0004222 ... P03956 8278810 MOAD: Ki=135nM
    6949 1cgl:B (2.4) BS02 ZN 3.4.24.7 GO:0004222 ... P03956 8278810
    6950 1cgl:B (2.4) BS03 ZN 3.4.24.7 GO:0004222 ... P03956 8278810
    6951 1cgl:B (2.4) BS04 CA 3.4.24.7 GO:0004222 ... P03956 8278810
    6952 1cgl:B (2.4) BS05 0ED 3.4.24.7 GO:0004222 ... P03956 8278810 MOAD: Ki=135nM
    6953 1cgm:E (3.4) BS01 rna ? GO:0005198 ... P69475 8201619
    6954 1cgn:A (2.15) BS01 HEC ? GO:0005506 ... P00138 15299707
    6955 1cgo:A (1.8) BS01 HEC ? GO:0005506 ... P00138 15299707
    6956 1cgp:A (3.0) BS01 dna ? GO:0003677 ... P0ACJ8 1653449
    6957 1cgp:A (3.0) BS02 dna ? GO:0003677 ... P0ACJ8 1653449
    6958 1cgp:A (3.0) BS03 dna ? GO:0003677 ... P0ACJ8 1653449
    6959 1cgp:A (3.0) BS04 CMP ? GO:0003677 ... P0ACJ8 1653449
    6960 1cgp:B (3.0) BS01 dna ? GO:0003677 ... P0ACJ8 1653449
    6961 1cgp:B (3.0) BS02 dna ? GO:0003677 ... P0ACJ8 1653449
    6962 1cgp:B (3.0) BS03 dna ? GO:0003677 ... P0ACJ8 1653449
    6963 1cgp:B (3.0) BS04 CMP ? GO:0003677 ... P0ACJ8 1653449
    6964 1cgp:B (3.0) BS05 CMP ? GO:0003677 ... P0ACJ8 1653449
    6965 1cgt:A (2.0) BS01 CA 2.4.1.19 GO:0003824 ... P30920 1826034
    6966 1cgt:A (2.0) BS02 CA 2.4.1.19 GO:0003824 ... P30920 1826034
    6967 1cgu:A (2.5) BS01 GLC 2.4.1.19 GO:0003824 ... P30920 1390660
    6968 1cgu:A (2.5) BS02 GLC 2.4.1.19 GO:0003824 ... P30920 1390660
    6969 1cgu:A (2.5) BS03 CA 2.4.1.19 GO:0003824 ... P30920 1390660
    6970 1cgu:A (2.5) BS04 CA 2.4.1.19 GO:0003824 ... P30920 1390660
    6971 1cgv:A (2.5) BS01 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6972 1cgv:A (2.5) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6973 1cgv:A (2.5) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6974 1cgv:A (2.5) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6975 1cgv:A (2.5) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6976 1cgv:A (2.5) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6977 1cgv:A (2.5) BS07 CA 2.4.1.19 GO:0003824 ... P43379 7880832
    6978 1cgv:A (2.5) BS08 CA 2.4.1.19 GO:0003824 ... P43379 7880832
    6979 1cgw:A (2.5) BS01 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6980 1cgw:A (2.5) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6981 1cgw:A (2.5) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6982 1cgw:A (2.5) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6983 1cgw:A (2.5) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6984 1cgw:A (2.5) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6985 1cgw:A (2.5) BS07 CA 2.4.1.19 GO:0003824 ... P43379 7880832
    6986 1cgw:A (2.5) BS08 CA 2.4.1.19 GO:0003824 ... P43379 7880832
    6987 1cgx:A (2.5) BS01 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6988 1cgx:A (2.5) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6989 1cgx:A (2.5) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6990 1cgx:A (2.5) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6991 1cgx:A (2.5) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6992 1cgx:A (2.5) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6993 1cgx:A (2.5) BS07 CA 2.4.1.19 GO:0003824 ... P43379 7880832
    6994 1cgx:A (2.5) BS08 CA 2.4.1.19 GO:0003824 ... P43379 7880832
    6995 1cgy:A (2.5) BS01 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6996 1cgy:A (2.5) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6997 1cgy:A (2.5) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6998 1cgy:A (2.5) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    6999 1cgy:A (2.5) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 7880832
    7000 1cgy:A (2.5) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 7880832

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).