SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    72001 2aro:E (2.1) BS01 PO4 ? GO:0000786 ... P02263 16920041
    72002 2arq:A (1.85) BS01 peptide ? GO:0001533 ... P05120 16214170
    72003 2arr:A (1.55) BS01 peptide ? GO:0001533 ... P05120 16214170
    72004 2ars:A (2.04) BS01 MG 6.3.1.20 GO:0005515 ... Q9HKT1 16141198
    72005 2art:A (2.4) BS01 MG 6.3.1.20 GO:0005515 ... Q9HKT1 16141198
    72006 2art:A (2.4) BS02 LPA 6.3.1.20 GO:0005515 ... Q9HKT1 16141198
    72007 2art:A (2.4) BS03 AMP 6.3.1.20 GO:0005515 ... Q9HKT1 16141198
    72008 2aru:A (2.5) BS01 MG 6.3.1.20 GO:0005515 ... Q9HKT1 16141198
    72009 2aru:A (2.5) BS02 ATP 6.3.1.20 GO:0005515 ... Q9HKT1 16141198
    72010 2arx:A (2.0) BS01 MAN ? GO:0030246 ... Q8GSD2 16704415
    72011 2arx:A (2.0) BS02 MAN ? GO:0030246 ... Q8GSD2 16704415
    72012 2arx:A (2.0) BS03 MN ? GO:0030246 ... Q8GSD2 16704415
    72013 2arx:A (2.0) BS04 CA ? GO:0030246 ... Q8GSD2 16704415
    72014 2arx:B (2.0) BS01 BMA ? GO:0030246 ... Q8GSD2 16704415
    72015 2arx:B (2.0) BS02 MAN ? GO:0030246 ... Q8GSD2 16704415
    72016 2arx:B (2.0) BS03 MAN ? GO:0030246 ... Q8GSD2 16704415
    72017 2arx:B (2.0) BS04 MN ? GO:0030246 ... Q8GSD2 16704415
    72018 2arx:B (2.0) BS05 CA ? GO:0030246 ... Q8GSD2 16704415
    72019 2ary:A (2.4) BS01 CA 3.4.22.52 GO:0004198 ... P07384 17157313
    72020 2ary:A (2.4) BS02 CA 3.4.22.52 GO:0004198 ... P07384 17157313
    72021 2ary:B (2.4) BS01 CA 3.4.22.52 GO:0004198 ... P07384 17157313
    72022 2ary:B (2.4) BS02 CA 3.4.22.52 GO:0004198 ... P07384 17157313
    72023 2as1:A (1.55) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 16490206
    72024 2as1:A (1.55) BS02 TP5 1.11.1.5 GO:0004601 ... P00431 16490206 MOAD: Kd=0.02mM
    72025 2as2:A (1.45) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 16490206
    72026 2as2:A (1.45) BS02 2IM 1.11.1.5 GO:0004601 ... P00431 16490206
    72027 2as3:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 16490206
    72028 2as3:A (1.4) BS02 IPH 1.11.1.5 GO:0004601 ... P00431 16490206 MOAD: Kd=4.1mM
    72029 2as4:A (1.3) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 16490206
    72030 2as4:A (1.3) BS02 3FA 1.11.1.5 GO:0004601 ... P00431 16490206 MOAD: Kd=7.7mM
    72031 2as4:A (1.3) BS03 3FA 1.11.1.5 GO:0004601 ... P00431 16490206 MOAD: Kd=7.7mM
    72032 2as5:F (2.7) BS01 dna ? GO:0003700 ... O15409 16873067
    72033 2as5:F (2.7) BS02 dna ? GO:0003700 ... O15409 16873067
    72034 2as5:F (2.7) BS03 dna ? GO:0003700 ... O15409 16873067
    72035 2as5:F (2.7) BS04 dna ? GO:0003700 ... O15409 16873067
    72036 2as5:F (2.7) BS05 MG ? GO:0003700 ... O15409 16873067
    72037 2as5:G (2.7) BS01 dna ? GO:0003700 ... O15409 16873067
    72038 2as5:G (2.7) BS02 dna ? GO:0003700 ... O15409 16873067
    72039 2as5:G (2.7) BS03 dna ? GO:0003700 ... O15409 16873067
    72040 2as5:G (2.7) BS04 MG ? GO:0003700 ... O15409 16873067
    72041 2as5:M (2.7) BS01 dna ? GO:0003677 ... Q13469 16873067
    72042 2as5:M (2.7) BS02 dna ? GO:0003677 ... Q13469 16873067
    72043 2as5:N (2.7) BS01 dna ? GO:0003677 ... Q13469 16873067
    72044 2as5:N (2.7) BS02 dna ? GO:0003677 ... Q13469 16873067
    72045 2as6:A (1.45) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 16490206
    72046 2as6:A (1.45) BS02 1CB 1.11.1.5 GO:0004601 ... P00431 16490206
    72047 2as8:A (1.95) BS01 MG 3.4.22.65 GO:0006508 ... P08176 16522455
    72048 2as8:B (1.95) BS01 MG 3.4.22.65 GO:0006508 ... P08176 16522455
    72049 2as9:A (1.7) BS01 ZN 3.4.21.- GO:0004252 ... Q53782 16516230
    72050 2as9:A (1.7) BS02 ZN 3.4.21.- GO:0004252 ... Q53782 16516230
    72051 2as9:B (1.7) BS01 ZN 3.4.21.- GO:0004252 ... Q53782 16516230
    72052 2as9:B (1.7) BS02 ZN 3.4.21.- GO:0004252 ... Q53782 16516230
    72053 2asb:A (1.5) BS01 rna ? GO:0003676 ... P9WIV3 16193062
    72054 2asd:A (1.95) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72055 2asd:A (1.95) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72056 2asd:A (1.95) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72057 2asd:A (1.95) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72058 2asd:A (1.95) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72059 2asd:A (1.95) BS06 DCP 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72060 2asd:B (1.95) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72061 2asd:B (1.95) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72062 2asd:B (1.95) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72063 2asd:B (1.95) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72064 2asd:B (1.95) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72065 2asd:B (1.95) BS06 DCP 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72066 2asf:A (1.6) BS01 CIT 1.3.98.- GO:0005515 ... P9WLL7 16880544
    72067 2ash:A (1.9) BS01 ZN 2.4.2.29 GO:0002099 ... Q9X1P7 N/A
    72068 2ash:B (1.9) BS01 ZN 2.4.2.29 GO:0002099 ... Q9X1P7 N/A
    72069 2ash:C (1.9) BS01 ZN 2.4.2.29 GO:0002099 ... Q9X1P7 N/A
    72070 2ash:D (1.9) BS01 ZN 2.4.2.29 GO:0002099 ... Q9X1P7 N/A
    72071 2asj:A (2.35) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72072 2asj:A (2.35) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72073 2asj:A (2.35) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72074 2asj:B (2.35) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72075 2asj:B (2.35) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72076 2asj:B (2.35) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72077 2ask:A (1.55) BS01 SO4 ? GO:0008083 ... Q5T4W7 16734417
    72078 2ask:A (1.55) BS02 SO4 ? GO:0008083 ... Q5T4W7 16734417
    72079 2ask:A (1.55) BS03 SO4 ? GO:0008083 ... Q5T4W7 16734417
    72080 2ask:A (1.55) BS04 SO4 ? GO:0008083 ... Q5T4W7 16734417
    72081 2asl:A (2.65) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72082 2asl:A (2.65) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72083 2asl:A (2.65) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72084 2asl:B (2.65) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72085 2asl:B (2.65) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72086 2asl:B (2.65) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72087 2asm:A (1.6) BS01 CA 3.6.4.- GO:0000287 ... P68135 16192358
    72088 2asm:A (1.6) BS02 ATP 3.6.4.- GO:0000287 ... P68135 16192358
    72089 2asm:A (1.6) BS03 RGA 3.6.4.- GO:0000287 ... P68135 16192358
    72090 2asn:X (1.7) BS01 HEM ? GO:0005576 ... Q26241 N/A
    72091 2aso:A (1.7) BS01 ATP 3.6.4.- GO:0000287 ... P68135 16192358
    72092 2aso:A (1.7) BS02 SPX 3.6.4.- GO:0000287 ... P68135 16192358
    72093 2asp:A (1.64) BS01 CA 3.6.4.- GO:0000287 ... P68135 16192358
    72094 2asp:A (1.64) BS02 ATP 3.6.4.- GO:0000287 ... P68135 16192358
    72095 2asp:A (1.64) BS03 RGC 3.6.4.- GO:0000287 ... P68135 16192358
    72096 2asq:A (-1.00) BS01 peptide ? GO:0000122 ... P63165 16204249
    72097 2ass:B (3.0) BS01 PO4 ? N/A Q13309 16209941
    72098 2ass:C (3.0) BS01 PO4 ? GO:0016538 ... P61024 16209941
    72099 2ass:C (3.0) BS02 PO4 ? GO:0016538 ... P61024 16209941
    72100 2ast:B (2.3) BS01 peptide ? N/A Q13309 16209941
    72101 2ast:C (2.3) BS01 peptide ? GO:0016538 ... P61024 16209941
    72102 2asu:B (1.85) BS01 peptide ? GO:0004252 ... P26927 16279944
    72103 2asv:A (1.95) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 N/A
    72104 2asv:A (1.95) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 N/A
    72105 2asv:A (1.95) BS03 GLC 2.4.1.1 GO:0004645 ... P00490 N/A
    72106 2asv:A (1.95) BS04 GLC 2.4.1.1 GO:0004645 ... P00490 N/A
    72107 2asv:A (1.95) BS05 ASO 2.4.1.1 GO:0004645 ... P00490 N/A
    72108 2asv:A (1.95) BS06 PLP 2.4.1.1 GO:0004645 ... P00490 N/A
    72109 2asv:B (1.95) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 N/A
    72110 2asv:B (1.95) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 N/A
    72111 2asv:B (1.95) BS03 GLC 2.4.1.1 GO:0004645 ... P00490 N/A
    72112 2asv:B (1.95) BS04 GLC 2.4.1.1 GO:0004645 ... P00490 N/A
    72113 2asv:B (1.95) BS05 ASO 2.4.1.1 GO:0004645 ... P00490 N/A
    72114 2asv:B (1.95) BS06 PLP 2.4.1.1 GO:0004645 ... P00490 N/A
    72115 2at0:X (1.0) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 N/A
    72116 2at1:A (2.8) BS01 GLC 2.1.3.2 GO:0004070 ... P0A786 2405902
    72117 2at1:A (2.8) BS02 PCT 2.1.3.2 GO:0004070 ... P0A786 2405902
    72118 2at1:B (2.8) BS01 ZN ? GO:0005515 ... P0A7F3 2405902
    72119 2at1:C (2.8) BS01 GLC 2.1.3.2 GO:0004070 ... P0A786 2405902
    72120 2at1:C (2.8) BS02 PCT 2.1.3.2 GO:0004070 ... P0A786 2405902
    72121 2at1:D (2.8) BS01 ZN ? GO:0005515 ... P0A7F3 2405902
    72122 2at3:X (1.0) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 N/A
    72123 2at5:X (1.22) BS01 FDE 1.7.6.1 GO:0005576 ... Q94734 N/A
    72124 2at6:X (1.22) BS01 FDE 1.7.6.1 GO:0005576 ... Q94734 N/A
    72125 2at8:X (1.0) BS01 FDD 1.7.6.1 GO:0005576 ... Q94734 N/A
    72126 2at9:A (3.0) BS01 RET ? GO:0005216 ... P02945 10024456
    72127 2ata:A (2.2) BS01 dna ? GO:0000976 ... P04637 16793544
    72128 2ata:A (2.2) BS02 dna ? GO:0000976 ... P04637 16793544
    72129 2ata:A (2.2) BS03 ZN ? GO:0000976 ... P04637 16793544
    72130 2ata:B (2.2) BS01 dna ? GO:0000976 ... P04637 16793544
    72131 2ata:B (2.2) BS02 ZN ? GO:0000976 ... P04637 16793544
    72132 2ata:C (2.2) BS01 dna ? GO:0000976 ... P04637 16793544
    72133 2ata:C (2.2) BS02 dna ? GO:0000976 ... P04637 16793544
    72134 2ata:C (2.2) BS03 dna ? GO:0000976 ... P04637 16793544
    72135 2ata:C (2.2) BS04 ZN ? GO:0000976 ... P04637 16793544
    72136 2ata:D (2.2) BS01 dna ? GO:0000976 ... P04637 16793544
    72137 2ata:D (2.2) BS02 ZN ? GO:0000976 ... P04637 16793544
    72138 2ata:D (2.2) BS03 ZN ? GO:0000976 ... P04637 16793544
    72139 2atc:B (3.0) BS01 ZN ? GO:0006207 ... P0A7F3 6757446
    72140 2ate:A (1.8) BS01 NIA 5.4.99.18 GO:0003824 ... P0AG18 17298082
    72141 2atf:A (1.75) BS01 NI 1.13.11.20 GO:0005506 ... P60334 16492780
    72142 2ath:A (2.28) BS01 3EA ? GO:0003677 ... P37231 16366601 MOAD: ic50=0.152uM
    BindingDB: IC50=152nM, EC50=230nM
    72143 2ath:B (2.28) BS01 3EA ? GO:0003677 ... P37231 16366601 MOAD: ic50=0.152uM
    BindingDB: IC50=152nM, EC50=230nM
    72144 2ati:A (1.9) BS01 GLC 2.4.1.1 GO:0002060 ... P06737 16190745
    72145 2ati:A (1.9) BS02 IHU 2.4.1.1 GO:0002060 ... P06737 16190745 MOAD: ic50=23nM
    BindingDB: IC50=23nM
    72146 2ati:A (1.9) BS03 PLP 2.4.1.1 GO:0002060 ... P06737 16190745
    72147 2ati:A (1.9) BS04 IHU 2.4.1.1 GO:0002060 ... P06737 16190745 MOAD: ic50=23nM
    BindingDB: IC50=23nM
    72148 2ati:B (1.9) BS01 IHU 2.4.1.1 GO:0002060 ... P06737 16190745 MOAD: ic50=23nM
    BindingDB: IC50=23nM
    72149 2ati:B (1.9) BS02 GLC 2.4.1.1 GO:0002060 ... P06737 16190745
    72150 2ati:B (1.9) BS03 IHU 2.4.1.1 GO:0002060 ... P06737 16190745 MOAD: ic50=23nM
    BindingDB: IC50=23nM
    72151 2ati:B (1.9) BS04 PLP 2.4.1.1 GO:0002060 ... P06737 16190745
    72152 2atj:A (2.0) BS01 CA 1.11.1.7 GO:0004601 ... P00433 9609699
    72153 2atj:A (2.0) BS02 CA 1.11.1.7 GO:0004601 ... P00433 9609699
    72154 2atj:A (2.0) BS03 HEM 1.11.1.7 GO:0004601 ... P00433 9609699
    72155 2atj:A (2.0) BS04 BHO 1.11.1.7 GO:0004601 ... P00433 9609699
    72156 2atj:B (2.0) BS01 CA 1.11.1.7 GO:0004601 ... P00433 9609699
    72157 2atj:B (2.0) BS02 CA 1.11.1.7 GO:0004601 ... P00433 9609699
    72158 2atj:B (2.0) BS03 HEM 1.11.1.7 GO:0004601 ... P00433 9609699
    72159 2atj:B (2.0) BS04 BHO 1.11.1.7 GO:0004601 ... P00433 9609699
    72160 2atl:A (2.8) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72161 2atl:A (2.8) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72162 2atl:A (2.8) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72163 2atl:A (2.8) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72164 2atl:A (2.8) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72165 2atl:A (2.8) BS06 DCP 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72166 2atl:B (2.8) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72167 2atl:B (2.8) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72168 2atl:B (2.8) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72169 2atl:B (2.8) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72170 2atl:B (2.8) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72171 2atl:B (2.8) BS06 DCP 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72172 2ato:A (2.0) BS01 MYQ 3.4.22.38 GO:0006508 ... P43235 17338641 MOAD: Ki=0.6uM
    72173 2atp:A (2.4) BS01 peptide ? N/A P01731 16356863
    72174 2atp:B (2.4) BS01 peptide ? GO:0015026 ... P10300 16356863
    72175 2atp:D (2.4) BS01 peptide ? GO:0015026 ... P10300 16356863
    72176 2atq:A (3.2) BS01 GDP 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 16881051
    72177 2atq:B (3.2) BS01 ZN ? GO:0003697 ... Q7Y265 16881051
    72178 2ats:A (1.9) BS01 DLY 4.3.3.7 GO:0005737 ... P0A6L2 N/A
    72179 2ats:A (1.9) BS02 DLY 4.3.3.7 GO:0005737 ... P0A6L2 N/A
    72180 2ats:B (1.9) BS01 DLY 4.3.3.7 GO:0005737 ... P0A6L2 N/A
    72181 2ats:B (1.9) BS02 DLY 4.3.3.7 GO:0005737 ... P0A6L2 N/A
    72182 2atv:A (1.9) BS01 GDP 3.6.5.2 GO:0003924 ... Q96A58 N/A
    72183 2atw:A (2.25) BS01 rna ? GO:0003676 ... P9WIV3 16193062
    72184 2atw:C (2.25) BS01 rna ? GO:0003676 ... P9WIV3 16193062
    72185 2atx:A (2.65) BS01 MG 3.6.5.2 GO:0003924 ... P17081 16246732
    72186 2atx:A (2.65) BS02 GNP 3.6.5.2 GO:0003924 ... P17081 16246732
    72187 2atx:B (2.65) BS01 MG 3.6.5.2 GO:0003924 ... P17081 16246732
    72188 2atx:B (2.65) BS02 GNP 3.6.5.2 GO:0003924 ... P17081 16246732
    72189 2atz:A (2.0) BS01 DGT ? N/A O24984 N/A
    72190 2au0:A (2.7) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72191 2au0:A (2.7) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72192 2au0:A (2.7) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72193 2au0:B (2.7) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72194 2au0:B (2.7) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 16379496
    72195 2au3:A (2.0) BS01 ZN 2.7.7.101 GO:0003677 ... O67465 16285921
    72196 2au6:A (1.2) BS01 PO4 3.6.1.1 GO:0000287 ... P0A7A9 17196979
    72197 2au6:A (1.2) BS02 MN 3.6.1.1 GO:0000287 ... P0A7A9 17196979
    72198 2au6:A (1.2) BS03 MN 3.6.1.1 GO:0000287 ... P0A7A9 17196979
    72199 2au6:A (1.2) BS04 F 3.6.1.1 GO:0000287 ... P0A7A9 17196979
    72200 2au6:A (1.2) BS05 POP 3.6.1.1 GO:0000287 ... P0A7A9 17196979

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).