SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    733601 7x75:D (3.45) BS05 ZN 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    733602 7x75:F (3.45) BS01 dna ? GO:0001108 ... P18183 35871291
    733603 7x75:F (3.45) BS02 dna ? GO:0001108 ... P18183 35871291
    733604 7x75:G (3.45) BS01 dna ? GO:0000976 ... Q9L2H5 35871291
    733605 7x75:G (3.45) BS02 dna ? GO:0000976 ... Q9L2H5 35871291
    733606 7x75:G (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    733607 7x75:G (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    733608 7x75:G (3.45) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    733609 7x75:H (3.45) BS01 dna ? GO:0000976 ... Q9L2H5 35871291
    733610 7x75:H (3.45) BS02 dna ? GO:0000976 ... Q9L2H5 35871291
    733611 7x75:H (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    733612 7x75:H (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    733613 7x75:H (3.45) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    733614 7x75:K (3.45) BS01 dna ? GO:0000976 ... Q9L2H5 35871291
    733615 7x75:K (3.45) BS02 dna ? GO:0000976 ... Q9L2H5 35871291
    733616 7x75:K (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    733617 7x75:K (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    733618 7x75:L (3.45) BS01 dna ? GO:0000976 ... Q9L2H5 35871291
    733619 7x75:L (3.45) BS02 dna ? GO:0000976 ... Q9L2H5 35871291
    733620 7x75:L (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    733621 7x75:L (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    733622 7x75:L (3.45) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    733623 7x75:M (3.45) BS01 dna ? GO:0000976 ... Q9L2H5 35871291
    733624 7x75:M (3.45) BS02 dna ? GO:0000976 ... Q9L2H5 35871291
    733625 7x75:M (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    733626 7x75:M (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    733627 7x75:M (3.45) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    733628 7x75:N (3.45) BS01 dna ? GO:0000976 ... Q9L2H5 35871291
    733629 7x75:N (3.45) BS02 dna ? GO:0000976 ... Q9L2H5 35871291
    733630 7x75:N (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    733631 7x75:N (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    733632 7x76:C (3.67) BS01 dna 2.7.7.6 GO:0000428 ... Q9L0L0 35871291
    733633 7x76:C (3.67) BS02 dna 2.7.7.6 GO:0000428 ... Q9L0L0 35871291
    733634 7x76:D (3.67) BS01 dna 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    733635 7x76:D (3.67) BS02 dna 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    733636 7x76:D (3.67) BS03 MG 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    733637 7x76:D (3.67) BS04 ZN 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    733638 7x76:D (3.67) BS05 ZN 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    733639 7x76:F (3.67) BS01 dna ? GO:0001108 ... P18183 35871291
    733640 7x76:F (3.67) BS02 dna ? GO:0001108 ... P18183 35871291
    733641 7x76:G (3.67) BS01 dna ? GO:0000976 ... Q9L2H5 35871291
    733642 7x76:G (3.67) BS02 dna ? GO:0000976 ... Q9L2H5 35871291
    733643 7x76:G (3.67) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    733644 7x76:G (3.67) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    733645 7x76:G (3.67) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    733646 7x76:H (3.67) BS01 dna ? GO:0000976 ... Q9L2H5 35871291
    733647 7x76:H (3.67) BS02 dna ? GO:0000976 ... Q9L2H5 35871291
    733648 7x76:H (3.67) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    733649 7x76:H (3.67) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    733650 7x76:H (3.67) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    733651 7x76:M (3.67) BS01 dna ? GO:0000976 ... Q9L2H5 35871291
    733652 7x76:M (3.67) BS02 dna ? GO:0000976 ... Q9L2H5 35871291
    733653 7x76:M (3.67) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    733654 7x76:M (3.67) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    733655 7x76:M (3.67) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    733656 7x76:N (3.67) BS01 dna ? GO:0000976 ... Q9L2H5 35871291
    733657 7x76:N (3.67) BS02 dna ? GO:0000976 ... Q9L2H5 35871291
    733658 7x76:N (3.67) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    733659 7x76:N (3.67) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    733660 7x78:A (1.85) BS01 SO4 4.1.2.17 GO:0003824 ... A6TD81 35366538
    733661 7x78:A (1.85) BS02 SO4 4.1.2.17 GO:0003824 ... A6TD81 35366538
    733662 7x78:A (1.85) BS03 SO4 4.1.2.17 GO:0003824 ... A6TD81 35366538
    733663 7x78:A (1.85) BS04 MG 4.1.2.17 GO:0003824 ... A6TD81 35366538
    733664 7x79:A (1.8) BS01 89K 3.4.22.52 GO:0001533 ... P07384 N/A
    733665 7x79:A (1.8) BS02 CA 3.4.22.52 GO:0001533 ... P07384 N/A
    733666 7x79:A (1.8) BS03 CA 3.4.22.52 GO:0001533 ... P07384 N/A
    733667 7x7a:A (3.2) BS01 rna ? GO:0051607 ... A0A0B0EGF3 36302881
    733668 7x7a:A (3.2) BS02 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733669 7x7a:A (3.2) BS03 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733670 7x7a:A (3.2) BS04 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733671 7x7a:A (3.2) BS05 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733672 7x7h:A (2.0) BS01 CA ? GO:0000976 ... Q9KM69 36987873
    733673 7x7h:C (2.0) BS01 CA ? GO:0000976 ... Q9KM69 36987873
    733674 7x7i:A (1.55) BS01 FAD N/A N/A N/A N/A
    733675 7x7i:B (1.55) BS01 FAD N/A N/A N/A N/A
    733676 7x7j:A (1.4) BS01 FAD N/A N/A N/A N/A
    733677 7x7j:A (1.4) BS02 LYS N/A N/A N/A N/A
    733678 7x7j:B (1.4) BS01 FAD N/A N/A N/A N/A
    733679 7x7j:B (1.4) BS02 LYS N/A N/A N/A N/A
    733680 7x7k:A (1.6) BS01 FAD N/A N/A N/A N/A
    733681 7x7k:A (1.6) BS02 ARG N/A N/A N/A N/A
    733682 7x7k:B (1.6) BS01 FAD N/A N/A N/A N/A
    733683 7x7k:B (1.6) BS02 ARG N/A N/A N/A N/A
    733684 7x7l:A (1.887) BS01 CO ? GO:0003868 ... A0A1D6H1G0 N/A
    733685 7x7l:A (1.887) BS02 94L ? GO:0003868 ... A0A1D6H1G0 N/A
    733686 7x7l:B (1.887) BS01 CO ? GO:0003868 ... A0A1D6H1G0 N/A
    733687 7x7l:B (1.887) BS02 94L ? GO:0003868 ... A0A1D6H1G0 N/A
    733688 7x7l:C (1.887) BS01 CO ? GO:0003868 ... A0A1D6H1G0 N/A
    733689 7x7l:C (1.887) BS02 94L ? GO:0003868 ... A0A1D6H1G0 N/A
    733690 7x7l:D (1.887) BS01 CO ? GO:0003868 ... A0A1D6H1G0 N/A
    733691 7x7l:D (1.887) BS02 94L ? GO:0003868 ... A0A1D6H1G0 N/A
    733692 7x7p:M (7.02) BS01 dna 3.6.4.12 GO:0003677 ... Q51426 37025142
    733693 7x7p:P (7.02) BS01 dna 3.6.4.12 GO:0003677 ... Q51426 37025142
    733694 7x7q:A (7.02) BS01 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733695 7x7q:A (7.02) BS02 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733696 7x7q:B (7.02) BS01 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733697 7x7q:B (7.02) BS02 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733698 7x7q:C (7.02) BS01 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733699 7x7q:C (7.02) BS02 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733700 7x7q:D (7.02) BS01 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733701 7x7q:D (7.02) BS02 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733702 7x7q:E (7.02) BS01 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733703 7x7q:E (7.02) BS02 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733704 7x7q:F (7.02) BS01 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733705 7x7q:F (7.02) BS02 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733706 7x7q:H (7.02) BS01 dna 3.6.4.12 GO:0000400 ... Q51425 37025142
    733707 7x7q:M (7.02) BS01 dna 3.6.4.12 GO:0000400 ... Q51426 37025142
    733708 7x7q:P (7.02) BS01 dna 3.6.4.12 GO:0000400 ... Q51426 37025142
    733709 7x7r:A (3.5) BS01 rna ? GO:0051607 ... A0A0B0EGF3 36302881
    733710 7x7r:A (3.5) BS02 rna ? GO:0051607 ... A0A0B0EGF3 36302881
    733711 7x7r:A (3.5) BS03 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733712 7x7r:A (3.5) BS04 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733713 7x7r:A (3.5) BS05 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733714 7x7w:A (2.097) BS01 MN N/A N/A N/A N/A
    733715 7x7w:B (2.097) BS01 MN N/A N/A N/A N/A
    733716 7x7x:A (2.1) BS01 AJW ? GO:0003677 ... P02768 36061730
    733717 7x7x:B (2.1) BS01 AJW ? GO:0003677 ... P02768 36061730
    733718 7x81:A (2.104) BS01 9LC N/A GO:0016853 ... N/A 36690833
    733719 7x81:B (2.104) BS01 9LC N/A GO:0016853 ... N/A 36690833
    733720 7x86:A (2.303) BS01 A3I N/A GO:0016853 ... N/A 36690833
    733721 7x86:B (2.303) BS01 A3I N/A GO:0016853 ... N/A 36690833
    733722 7x86:C (2.303) BS01 A3I N/A GO:0016853 ... N/A 36690833
    733723 7x86:D (2.303) BS01 A3I N/A GO:0016853 ... N/A 36690833
    733724 7x87:A (1.79) BS01 BGC ? GO:0004553 ... I0AIT9 35065074
    733725 7x87:A (1.79) BS02 BGC ? GO:0004553 ... I0AIT9 35065074
    733726 7x87:B (1.79) BS01 CA ? GO:0004553 ... I0AIT9 35065074
    733727 7x87:B (1.79) BS02 CA ? GO:0004553 ... I0AIT9 35065074
    733728 7x88:A (2.25) BS01 peptide ? N/A Q03111 36272410
    733729 7x8a:A (2.8) BS01 rna ? GO:0051607 ... A0A0B0EGF3 36302881
    733730 7x8a:A (2.8) BS02 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733731 7x8a:A (2.8) BS03 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733732 7x8a:A (2.8) BS04 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733733 7x8a:A (2.8) BS05 ZN ? GO:0051607 ... A0A0B0EGF3 36302881
    733734 7x8b:A (2.3) BS01 peptide ? N/A Q03111 36272410
    733735 7x8b:C (2.3) BS01 peptide ? N/A Q03111 36272410
    733736 7x8b:C (2.3) BS02 peptide ? N/A Q03111 36272410
    733737 7x8d:A (1.695) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    733738 7x8d:A (1.695) BS02 PPY 1.13.11.27 GO:0003868 ... P93836 N/A
    733739 7x8e:A (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    733740 7x8e:A (2.749) BS02 92X N/A GO:0003868 ... N/A N/A
    733741 7x8e:B (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    733742 7x8e:B (2.749) BS02 92X N/A GO:0003868 ... N/A N/A
    733743 7x8e:C (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    733744 7x8e:C (2.749) BS02 92X N/A GO:0003868 ... N/A N/A
    733745 7x8e:D (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    733746 7x8e:D (2.749) BS02 92X N/A GO:0003868 ... N/A N/A
    733747 7x8e:E (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    733748 7x8e:E (2.749) BS02 92X N/A GO:0003868 ... N/A N/A
    733749 7x8e:F (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    733750 7x8e:F (2.749) BS02 92X N/A GO:0003868 ... N/A N/A
    733751 7x8e:G (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    733752 7x8e:G (2.749) BS02 92X N/A GO:0003868 ... N/A N/A
    733753 7x8e:H (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    733754 7x8e:H (2.749) BS02 92X N/A GO:0003868 ... N/A N/A
    733755 7x8f:A (2.44) BS01 peptide ? N/A Q03111 36272410
    733756 7x8f:A (2.44) BS02 peptide ? N/A Q03111 36272410
    733757 7x8f:C (2.44) BS01 peptide ? N/A Q03111 36272410
    733758 7x8g:A (1.91) BS01 peptide ? N/A Q03111 36272410
    733759 7x8g:C (1.91) BS01 peptide ? N/A Q03111 36272410
    733760 7x8h:A (1.986) BS01 CO 1.13.11.27 GO:0003868 ... P93836 36599124
    733761 7x8h:A (1.986) BS02 AIY 1.13.11.27 GO:0003868 ... P93836 36599124
    733762 7x8i:A (2.096) BS01 CO 1.13.11.27 GO:0003868 ... P93836 36599124
    733763 7x8i:A (2.096) BS02 FNO 1.13.11.27 GO:0003868 ... P93836 36599124
    733764 7x8k:A (3.0) BS01 GDD 2.7.7.13 GO:0004475 ... O22287 35677252
    733765 7x8k:B (3.0) BS01 PPV 2.7.7.13 GO:0004475 ... O22287 35677252
    733766 7x8k:D (3.0) BS01 PPV 2.7.7.13 GO:0004475 ... O22287 35677252
    733767 7x8r:R (2.61) BS01 BYI ? GO:0004888 ... P43220 35561211
    733768 7x8s:R (3.09) BS01 WB2 ? GO:0004888 ... P43220 35561211
    733769 7x8x:A (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC3 N/A
    733770 7x8x:B (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733771 7x8x:B (3.24) BS02 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733772 7x8x:B (3.24) BS03 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733773 7x8x:C (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC3 N/A
    733774 7x8x:D (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733775 7x8x:D (3.24) BS02 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733776 7x8x:D (3.24) BS03 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733777 7x8x:E (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC3 N/A
    733778 7x8x:F (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC3 N/A
    733779 7x8x:G (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733780 7x8x:G (3.24) BS02 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733781 7x8x:G (3.24) BS03 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733782 7x8x:H (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC3 N/A
    733783 7x8x:I (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733784 7x8x:I (3.24) BS02 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733785 7x8x:I (3.24) BS03 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733786 7x8x:J (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC3 N/A
    733787 7x8x:K (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733788 7x8x:K (3.24) BS02 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733789 7x8x:K (3.24) BS03 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733790 7x8x:L (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC3 N/A
    733791 7x8x:M (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733792 7x8x:M (3.24) BS02 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733793 7x8x:M (3.24) BS03 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733794 7x8x:N (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733795 7x8x:N (3.24) BS02 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733796 7x8x:N (3.24) BS03 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733797 7x8x:O (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC3 N/A
    733798 7x8x:P (3.24) BS01 peptide 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733799 7x8x:P (3.24) BS02 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A
    733800 7x8x:P (3.24) BS03 AI4 3.4.21.92 GO:0004176 ... P9WPC5 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).